RNA–Protein interactions for RNA: ENST00000378406.5

CCDC107-202, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 1,016 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-202ENST00000378406 SOCS7O14512 581 aa31.42■■■□□ 2.62
CCDC107-202ENST00000378406 KIF3BO15066 747 aa31.41■■■□□ 2.62
CCDC107-202ENST00000378406 UBAP1LF5GYI3 381 aa31.4■■■□□ 2.62
CCDC107-202ENST00000378406 FBXO31Q5XUX0 539 aaPredicted RBP31.39■■■□□ 2.62
CCDC107-202ENST00000378406 KDM5DQ9BY66 1539 aa31.39■■■□□ 2.61
CCDC107-202ENST00000378406 TNRQ92752 1358 aa31.38■■■□□ 2.61
CCDC107-202ENST00000378406 FAM135AQ9P2D6 1515 aa31.38■■■□□ 2.61
CCDC107-202ENST00000378406 PZPP20742 1482 aa31.37■■■□□ 2.61
CCDC107-202ENST00000378406 RSPH4AQ5TD94 716 aa31.36■■■□□ 2.61
CCDC107-202ENST00000378406 POLR1AO95602 1720 aaPredicted RBP31.33■■■□□ 2.61
CCDC107-202ENST00000378406 NEURL4Q96JN8 1562 aa31.33■■■□□ 2.61
CCDC107-202ENST00000378406 ARHGEF5Q12774 1597 aa31.31■■■□□ 2.6
CCDC107-202ENST00000378406 WASHC2CQ9Y4E1 1318 aa31.31■■■□□ 2.6
CCDC107-202ENST00000378406 MIA2Q96PC5 1412 aa31.25■■■□□ 2.59
CCDC107-202ENST00000378406 CPS1P31327 1500 aa31.24■■■□□ 2.59
CCDC107-202ENST00000378406 NLRP1Q9C000 1473 aa31.23■■■□□ 2.59
CCDC107-202ENST00000378406 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.23■■■□□ 2.59
CCDC107-202ENST00000378406 TSPY4P0CV99 314 aa31.23■■■□□ 2.59
CCDC107-202ENST00000378406 TSPY10P0CW01 314 aa31.23■■■□□ 2.59
CCDC107-202ENST00000378406 SHANK2Q9UPX8 1470 aa31.22■■■□□ 2.59
CCDC107-202ENST00000378406 ANKLE2Q86XL3 938 aa31.2■■■□□ 2.59
CCDC107-202ENST00000378406 LRRC9Q6ZRR7 1453 aa31.2■■■□□ 2.58
CCDC107-202ENST00000378406 UGGT1Q9NYU2 1555 aa31.19■■■□□ 2.58
CCDC107-202ENST00000378406 THEMISQ8N1K5 641 aaPredicted RBP31.19■■■□□ 2.58
CCDC107-202ENST00000378406 RNF17Q9BXT8 1623 aaKnown RBP31.19■■■□□ 2.58
CCDC107-202ENST00000378406 MAST1Q9Y2H9 1570 aa31.17■■■□□ 2.58
CCDC107-202ENST00000378406 VWDEQ8N2E2 1590 aa31.17■■■□□ 2.58
CCDC107-202ENST00000378406 DEPDC5O75140 1603 aa31.16■■■□□ 2.58
CCDC107-202ENST00000378406 VPS8Q8N3P4 1428 aa31.15■■■□□ 2.58
CCDC107-202ENST00000378406 MED14O60244 1454 aa31.15■■■□□ 2.58
CCDC107-202ENST00000378406 ABCC3O15438 1527 aa31.14■■■□□ 2.58
CCDC107-202ENST00000378406 NPHP4O75161 1426 aaPredicted RBP31.14■■■□□ 2.58
CCDC107-202ENST00000378406 ZC3H13Q5T200 1668 aaKnown RBP31.13■■■□□ 2.57
CCDC107-202ENST00000378406 PIP4K2BP78356 416 aa31.12■■■□□ 2.57
CCDC107-202ENST00000378406 TOM1O60784 492 aa31.11■■■□□ 2.57
CCDC107-202ENST00000378406 HSPA1LP34931 641 aa31.11■■■□□ 2.57
CCDC107-202ENST00000378406 SCAF1Q9H7N4 1312 aaKnown RBP31.11■■■□□ 2.57
CCDC107-202ENST00000378406 EIF2AK4Q9P2K8 1649 aaKnown RBP31.1■■■□□ 2.57
CCDC107-202ENST00000378406 MROH1Q8NDA8 1641 aa31.09■■■□□ 2.57
CCDC107-202ENST00000378406 KANK4Q5T7N3 995 aaPredicted RBP31.08■■■□□ 2.57
CCDC107-202ENST00000378406 IQGAP1P46940 1657 aa31.07■■■□□ 2.56
CCDC107-202ENST00000378406 ERVK-7P63135 1459 aa31.07■■■□□ 2.56
CCDC107-202ENST00000378406 MAP3K1Q13233 1512 aa31.05■■■□□ 2.56
CCDC107-202ENST00000378406 MYOM3Q5VTT5 1437 aa31.04■■■□□ 2.56
CCDC107-202ENST00000378406 ALKQ9UM73 1620 aa31.03■■■□□ 2.56
CCDC107-202ENST00000378406 LOC105371045A0A1W2PR82 267 aa31.02■■■□□ 2.56
CCDC107-202ENST00000378406 CEP152O94986 1710 aa31.01■■■□□ 2.56
CCDC107-202ENST00000378406 MED1Q15648 1581 aaPredicted RBP31.01■■■□□ 2.56
CCDC107-202ENST00000378406 STRCP1A6NGW2 1772 aa31■■■□□ 2.55
CCDC107-202ENST00000378406 DUOX2Q9NRD8 1548 aa30.98■■■□□ 2.55
CCDC107-202ENST00000378406 CFAP65Q6ZU64 1925 aaKnown RBP30.96■■■□□ 2.55
CCDC107-202ENST00000378406 UBR1Q8IWV7 1749 aa30.96■■■□□ 2.55
CCDC107-202ENST00000378406 LRRC7Q96NW7 1537 aa30.95■■■□□ 2.55
CCDC107-202ENST00000378406 PRDM15P57071 1507 aaPredicted RBP30.91■■■□□ 2.54
CCDC107-202ENST00000378406 SYNMO15061 1565 aa30.91■■■□□ 2.54
CCDC107-202ENST00000378406 KIF15Q9NS87 1388 aa30.91■■■□□ 2.54
CCDC107-202ENST00000378406 ARHGAP31Q2M1Z3 1444 aa30.9■■■□□ 2.54
CCDC107-202ENST00000378406 SCAF11Q99590 1463 aaKnown RBP30.89■■■□□ 2.54
CCDC107-202ENST00000378406 CROCC2H7BZ55 1655 aa30.88■■■□□ 2.53
CCDC107-202ENST00000378406 ABCC5O15440 1437 aa30.88■■■□□ 2.53
CCDC107-202ENST00000378406 ARHGAP23Q9P227 1491 aa30.88■■■□□ 2.53
CCDC107-202ENST00000378406 ERBINQ96RT1 1412 aa30.87■■■□□ 2.53
CCDC107-202ENST00000378406 SLIT1O75093 1534 aa30.87■■■□□ 2.53
CCDC107-202ENST00000378406 LTKP29376 864 aa30.86■■■□□ 2.53
CCDC107-202ENST00000378406 RRP7BPQ9NSQ0 103 aa30.84■■■□□ 2.53
CCDC107-202ENST00000378406 PTPN23Q9H3S7 1636 aa30.84■■■□□ 2.53
CCDC107-202ENST00000378406 TXNDC2Q86VQ3 553 aa30.82■■■□□ 2.52
CCDC107-202ENST00000378406 DAPK1P53355 1430 aa30.79■■■□□ 2.52
CCDC107-202ENST00000378406 PIK3C2BO00750 1634 aa30.78■■■□□ 2.52
CCDC107-202ENST00000378406 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.78■■■□□ 2.52
CCDC107-202ENST00000378406 SENP3Q9H4L4 574 aaPredicted RBP30.76■■■□□ 2.51
CCDC107-202ENST00000378406 PHF23Q9BUL5 403 aaPredicted RBP30.74■■■□□ 2.51
CCDC107-202ENST00000378406 EID1Q9Y6B2 187 aa30.74■■■□□ 2.51
CCDC107-202ENST00000378406 XIRP1Q702N8 1843 aaKnown RBP30.74■■■□□ 2.51
CCDC107-202ENST00000378406 KANK1Q14678 1352 aa30.73■■■□□ 2.51
CCDC107-202ENST00000378406 TMEM2Q9UHN6 1383 aa30.73■■■□□ 2.51
CCDC107-202ENST00000378406 FGD6Q6ZV73 1430 aa30.73■■■□□ 2.51
CCDC107-202ENST00000378406 LMTK2Q8IWU2 1503 aa30.71■■■□□ 2.51
CCDC107-202ENST00000378406 KDM5AP29375 1690 aaKnown RBP30.69■■■□□ 2.5
CCDC107-202ENST00000378406 APLP2Q06481 763 aa30.69■■■□□ 2.5
CCDC107-202ENST00000378406 EFCAB6Q5THR3 1501 aa30.68■■■□□ 2.5
CCDC107-202ENST00000378406 ANKRD30AQ9BXX3 1397 aa30.67■■■□□ 2.5
CCDC107-202ENST00000378406 STAG3Q9UJ98 1225 aa30.67■■■□□ 2.5
CCDC107-202ENST00000378406 IDI1Q13907 227 aa30.66■■■□□ 2.5
CCDC107-202ENST00000378406 CHIC2Q9UKJ5 165 aa30.66■■■□□ 2.5
CCDC107-202ENST00000378406 NOS1P29475 1434 aa30.61■■■□□ 2.49
CCDC107-202ENST00000378406 TET3O43151 1660 aa30.61■■■□□ 2.49
CCDC107-202ENST00000378406 TMEM94Q12767 1356 aa30.58■■■□□ 2.49
CCDC107-202ENST00000378406 FAM135BQ49AJ0 1406 aa30.57■■■□□ 2.48
CCDC107-202ENST00000378406 KCNA6P17658 529 aa30.57■■■□□ 2.48
CCDC107-202ENST00000378406 ADGRB3O60242 1522 aa30.57■■■□□ 2.48
CCDC107-202ENST00000378406 ADGRL2O95490 1459 aa30.56■■■□□ 2.48
CCDC107-202ENST00000378406 SLC26A8Q96RN1 970 aa30.55■■■□□ 2.48
CCDC107-202ENST00000378406 RGS17Q9UGC6 210 aaPredicted RBP30.54■■■□□ 2.48
CCDC107-202ENST00000378406 SLC52A1Q9NWF4 448 aa30.51■■■□□ 2.47
CCDC107-202ENST00000378406 NWD1Q149M9 1564 aa30.49■■■□□ 2.47
CCDC107-202ENST00000378406 PROSER2Q86WR7 435 aaPredicted RBP30.49■■■□□ 2.47
CCDC107-202ENST00000378406 RBM33Q96EV2 1170 aaKnown RBP30.49■■■□□ 2.47
CCDC107-202ENST00000378406 NKTRP30414 1462 aaKnown RBP30.48■■■□□ 2.47
CCDC107-202ENST00000378406 ROBO1Q9Y6N7 1651 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms