RNA–Protein interactions for RNA: ENST00000376497.7

CLCN6-207, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 3 BASIC

Gene CLCN6, Length 814 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-207ENST00000376497 ARHGEF5Q12774 1597 aa24.43■■□□□ 1.5
CLCN6-207ENST00000376497 KDM5DQ9BY66 1539 aa24.41■■□□□ 1.5
CLCN6-207ENST00000376497 DISP3Q9P2K9 1392 aa24.41■■□□□ 1.5
CLCN6-207ENST00000376497 LOC105371045A0A1W2PR82 267 aa24.4■■□□□ 1.5
CLCN6-207ENST00000376497 PZPP20742 1482 aa24.39■■□□□ 1.5
CLCN6-207ENST00000376497 TSPY4P0CV99 314 aa24.37■■□□□ 1.49
CLCN6-207ENST00000376497 TSPY10P0CW01 314 aa24.37■■□□□ 1.49
CLCN6-207ENST00000376497 FBXO31Q5XUX0 539 aaPredicted RBP24.37■■□□□ 1.49
CLCN6-207ENST00000376497 POLR1AO95602 1720 aaPredicted RBP24.37■■□□□ 1.49
CLCN6-207ENST00000376497 TNRQ92752 1358 aa24.37■■□□□ 1.49
CLCN6-207ENST00000376497 LRRC9Q6ZRR7 1453 aa24.37■■□□□ 1.49
CLCN6-207ENST00000376497 WASHC2CQ9Y4E1 1318 aa24.36■■□□□ 1.49
CLCN6-207ENST00000376497 VPS8Q8N3P4 1428 aa24.36■■□□□ 1.49
CLCN6-207ENST00000376497 MAST1Q9Y2H9 1570 aa24.33■■□□□ 1.48
CLCN6-207ENST00000376497 ILDR2Q71H61 639 aa24.32■■□□□ 1.48
CLCN6-207ENST00000376497 SPATA31D1Q6ZQQ2 1576 aa24.32■■□□□ 1.48
CLCN6-207ENST00000376497 NEURL4Q96JN8 1562 aa24.32■■□□□ 1.48
CLCN6-207ENST00000376497 MAP3K1Q13233 1512 aa24.3■■□□□ 1.48
CLCN6-207ENST00000376497 MIA2Q96PC5 1412 aa24.3■■□□□ 1.48
CLCN6-207ENST00000376497 UBAP1LF5GYI3 381 aa24.3■■□□□ 1.48
CLCN6-207ENST00000376497 RNF17Q9BXT8 1623 aaKnown RBP24.3■■□□□ 1.48
CLCN6-207ENST00000376497 NLRP1Q9C000 1473 aa24.28■■□□□ 1.48
CLCN6-207ENST00000376497 EIF2AK4Q9P2K8 1649 aaKnown RBP24.27■■□□□ 1.48
CLCN6-207ENST00000376497 ZC3H13Q5T200 1668 aaKnown RBP24.27■■□□□ 1.48
CLCN6-207ENST00000376497 KANK4Q5T7N3 995 aaPredicted RBP24.26■■□□□ 1.47
CLCN6-207ENST00000376497 THEMISQ8N1K5 641 aaPredicted RBP24.26■■□□□ 1.47
CLCN6-207ENST00000376497 UGGT1Q9NYU2 1555 aa24.25■■□□□ 1.47
CLCN6-207ENST00000376497 ANKLE2Q86XL3 938 aa24.25■■□□□ 1.47
CLCN6-207ENST00000376497 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.25■■□□□ 1.47
CLCN6-207ENST00000376497 CPS1P31327 1500 aa24.24■■□□□ 1.47
CLCN6-207ENST00000376497 ABCC3O15438 1527 aa24.23■■□□□ 1.47
CLCN6-207ENST00000376497 DEPDC5O75140 1603 aa24.23■■□□□ 1.47
CLCN6-207ENST00000376497 SHANK2Q9UPX8 1470 aa24.22■■□□□ 1.47
CLCN6-207ENST00000376497 MYOM3Q5VTT5 1437 aa24.22■■□□□ 1.47
CLCN6-207ENST00000376497 MED14O60244 1454 aa24.21■■□□□ 1.47
CLCN6-207ENST00000376497 SOCS7O14512 581 aa24.21■■□□□ 1.47
CLCN6-207ENST00000376497 MROH1Q8NDA8 1641 aa24.2■■□□□ 1.46
CLCN6-207ENST00000376497 VWDEQ8N2E2 1590 aa24.18■■□□□ 1.46
CLCN6-207ENST00000376497 NPHP4O75161 1426 aaPredicted RBP24.18■■□□□ 1.46
CLCN6-207ENST00000376497 CFAP65Q6ZU64 1925 aaKnown RBP24.18■■□□□ 1.46
CLCN6-207ENST00000376497 CEP152O94986 1710 aa24.17■■□□□ 1.46
CLCN6-207ENST00000376497 DUOX2Q9NRD8 1548 aa24.16■■□□□ 1.46
CLCN6-207ENST00000376497 ERVK-7P63135 1459 aa24.16■■□□□ 1.46
CLCN6-207ENST00000376497 IQGAP1P46940 1657 aa24.15■■□□□ 1.46
CLCN6-207ENST00000376497 TOM1O60784 492 aa24.14■■□□□ 1.45
CLCN6-207ENST00000376497 CROCC2H7BZ55 1655 aa24.11■■□□□ 1.45
CLCN6-207ENST00000376497 UBR1Q8IWV7 1749 aa24.1■■□□□ 1.45
CLCN6-207ENST00000376497 PTPN23Q9H3S7 1636 aa24.09■■□□□ 1.45
CLCN6-207ENST00000376497 STRCP1A6NGW2 1772 aa24.08■■□□□ 1.45
CLCN6-207ENST00000376497 PRDM15P57071 1507 aaPredicted RBP24.08■■□□□ 1.45
CLCN6-207ENST00000376497 ABCC5O15440 1437 aa24.08■■□□□ 1.44
CLCN6-207ENST00000376497 KIF15Q9NS87 1388 aa24.07■■□□□ 1.44
CLCN6-207ENST00000376497 HSPA1LP34931 641 aa24.07■■□□□ 1.44
CLCN6-207ENST00000376497 PIP4K2BP78356 416 aa24.07■■□□□ 1.44
CLCN6-207ENST00000376497 ARHGAP31Q2M1Z3 1444 aa24.07■■□□□ 1.44
CLCN6-207ENST00000376497 ERBINQ96RT1 1412 aa24.07■■□□□ 1.44
CLCN6-207ENST00000376497 SCAF1Q9H7N4 1312 aaKnown RBP24.07■■□□□ 1.44
CLCN6-207ENST00000376497 ALKQ9UM73 1620 aa24.05■■□□□ 1.44
CLCN6-207ENST00000376497 RRP7BPQ9NSQ0 103 aa24.03■■□□□ 1.44
CLCN6-207ENST00000376497 DAPK1P53355 1430 aa24.02■■□□□ 1.44
CLCN6-207ENST00000376497 APLP2Q06481 763 aa24.02■■□□□ 1.44
CLCN6-207ENST00000376497 ARHGAP23Q9P227 1491 aa24.01■■□□□ 1.43
CLCN6-207ENST00000376497 SLIT1O75093 1534 aa24.01■■□□□ 1.43
CLCN6-207ENST00000376497 LRRC7Q96NW7 1537 aa24.01■■□□□ 1.43
CLCN6-207ENST00000376497 SYNMO15061 1565 aa24.01■■□□□ 1.43
CLCN6-207ENST00000376497 SCAF11Q99590 1463 aaKnown RBP24■■□□□ 1.43
CLCN6-207ENST00000376497 FGD6Q6ZV73 1430 aa23.99■■□□□ 1.43
CLCN6-207ENST00000376497 LTKP29376 864 aa23.97■■□□□ 1.43
CLCN6-207ENST00000376497 MED1Q15648 1581 aaPredicted RBP23.97■■□□□ 1.43
CLCN6-207ENST00000376497 PIK3C2BO00750 1634 aa23.96■■□□□ 1.43
CLCN6-207ENST00000376497 TXNDC2Q86VQ3 553 aa23.96■■□□□ 1.43
CLCN6-207ENST00000376497 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.96■■□□□ 1.437e-8■□□□□ 10.7
CLCN6-207ENST00000376497 KANK1Q14678 1352 aa23.95■■□□□ 1.42
CLCN6-207ENST00000376497 KDM5AP29375 1690 aaKnown RBP23.94■■□□□ 1.42
CLCN6-207ENST00000376497 LMTK2Q8IWU2 1503 aa23.94■■□□□ 1.42
CLCN6-207ENST00000376497 ANKRD30AQ9BXX3 1397 aa23.93■■□□□ 1.42
CLCN6-207ENST00000376497 EID1Q9Y6B2 187 aa23.91■■□□□ 1.42
CLCN6-207ENST00000376497 XIRP1Q702N8 1843 aaKnown RBP23.91■■□□□ 1.42
CLCN6-207ENST00000376497 CHIC2Q9UKJ5 165 aa23.9■■□□□ 1.42
CLCN6-207ENST00000376497 TMEM2Q9UHN6 1383 aa23.9■■□□□ 1.42
CLCN6-207ENST00000376497 IDI1Q13907 227 aa23.87■■□□□ 1.41
CLCN6-207ENST00000376497 ADGRL2O95490 1459 aa23.87■■□□□ 1.41
CLCN6-207ENST00000376497 EFCAB6Q5THR3 1501 aa23.86■■□□□ 1.41
CLCN6-207ENST00000376497 STAG3Q9UJ98 1225 aa23.86■■□□□ 1.41
CLCN6-207ENST00000376497 NOS1P29475 1434 aa23.84■■□□□ 1.41
CLCN6-207ENST00000376497 TET3O43151 1660 aa23.81■■□□□ 1.4
CLCN6-207ENST00000376497 ADGRB3O60242 1522 aa23.79■■□□□ 1.4
CLCN6-207ENST00000376497 SLC52A1Q9NWF4 448 aa23.78■■□□□ 1.4
CLCN6-207ENST00000376497 RPRD2Q5VT52 1461 aaKnown RBP23.77■■□□□ 1.4
CLCN6-207ENST00000376497 KCNA6P17658 529 aa23.77■■□□□ 1.4
CLCN6-207ENST00000376497 PHF23Q9BUL5 403 aaPredicted RBP23.77■■□□□ 1.4
CLCN6-207ENST00000376497 SENP3Q9H4L4 574 aaPredicted RBP23.76■■□□□ 1.39
CLCN6-207ENST00000376497 ANKRD50Q9ULJ7 1429 aa23.76■■□□□ 1.39
CLCN6-207ENST00000376497 FAM50AQ14320 339 aaKnown RBP23.75■■□□□ 1.39
CLCN6-207ENST00000376497 FAM135BQ49AJ0 1406 aa23.74■■□□□ 1.39
CLCN6-207ENST00000376497 SLC26A8Q96RN1 970 aa23.73■■□□□ 1.39
CLCN6-207ENST00000376497 TMEM94Q12767 1356 aa23.73■■□□□ 1.39
CLCN6-207ENST00000376497 MYO5BQ9ULV0 1848 aa23.73■■□□□ 1.39
CLCN6-207ENST00000376497 NWD1Q149M9 1564 aa23.71■■□□□ 1.39
CLCN6-207ENST00000376497 GCC2Q8IWJ2 1684 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms