RNA–Protein interactions for RNA: ENST00000373891.2

CHPF-202, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 1,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-202ENST00000373891 A2ML1A8K2U0 1454 aa32.42■■■□□ 2.78
CHPF-202ENST00000373891 UBAP1LF5GYI3 381 aa32.39■■■□□ 2.78
CHPF-202ENST00000373891 FBXO31Q5XUX0 539 aaPredicted RBP32.39■■■□□ 2.78
CHPF-202ENST00000373891 POLR1AO95602 1720 aaPredicted RBP32.39■■■□□ 2.78
CHPF-202ENST00000373891 KDM5DQ9BY66 1539 aa32.36■■■□□ 2.77
CHPF-202ENST00000373891 TNRQ92752 1358 aa32.34■■■□□ 2.77
CHPF-202ENST00000373891 PZPP20742 1482 aa32.31■■■□□ 2.76
CHPF-202ENST00000373891 WASHC2CQ9Y4E1 1318 aa32.3■■■□□ 2.76
CHPF-202ENST00000373891 NEURL4Q96JN8 1562 aa32.3■■■□□ 2.76
CHPF-202ENST00000373891 ARHGEF5Q12774 1597 aa32.28■■■□□ 2.76
CHPF-202ENST00000373891 SOCS7O14512 581 aa32.28■■■□□ 2.76
CHPF-202ENST00000373891 RSPH4AQ5TD94 716 aa32.26■■■□□ 2.75
CHPF-202ENST00000373891 FAM135AQ9P2D6 1515 aa32.25■■■□□ 2.75
CHPF-202ENST00000373891 TSPY4P0CV99 314 aa32.23■■■□□ 2.75
CHPF-202ENST00000373891 TSPY10P0CW01 314 aa32.23■■■□□ 2.75
CHPF-202ENST00000373891 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.22■■■□□ 2.755e-6■■■■■ 46.2
CHPF-202ENST00000373891 CFAP65Q6ZU64 1925 aaKnown RBP32.21■■■□□ 2.75
CHPF-202ENST00000373891 SCAF1Q9H7N4 1312 aaKnown RBP32.21■■■□□ 2.75
CHPF-202ENST00000373891 LRRC9Q6ZRR7 1453 aa32.2■■■□□ 2.75
CHPF-202ENST00000373891 MIA2Q96PC5 1412 aa32.18■■■□□ 2.74
CHPF-202ENST00000373891 UGGT1Q9NYU2 1555 aa32.18■■■□□ 2.74
CHPF-202ENST00000373891 VPS8Q8N3P4 1428 aa32.17■■■□□ 2.74
CHPF-202ENST00000373891 RNF17Q9BXT8 1623 aaKnown RBP32.16■■■□□ 2.74
CHPF-202ENST00000373891 LOC105371045A0A1W2PR82 267 aa32.16■■■□□ 2.74
CHPF-202ENST00000373891 SHANK2Q9UPX8 1470 aa32.16■■■□□ 2.74
CHPF-202ENST00000373891 PIP4K2BP78356 416 aa32.15■■■□□ 2.74
CHPF-202ENST00000373891 ANKLE2Q86XL3 938 aa32.15■■■□□ 2.74
CHPF-202ENST00000373891 NLRP1Q9C000 1473 aa32.15■■■□□ 2.74
CHPF-202ENST00000373891 CPS1P31327 1500 aa32.14■■■□□ 2.74
CHPF-202ENST00000373891 CEP152O94986 1710 aa32.13■■■□□ 2.73
CHPF-202ENST00000373891 MAST1Q9Y2H9 1570 aa32.13■■■□□ 2.73
CHPF-202ENST00000373891 ABCC3O15438 1527 aa32.12■■■□□ 2.73
CHPF-202ENST00000373891 THEMISQ8N1K5 641 aaPredicted RBP32.12■■■□□ 2.73
CHPF-202ENST00000373891 ZC3H13Q5T200 1668 aaKnown RBP32.11■■■□□ 2.73
CHPF-202ENST00000373891 VWDEQ8N2E2 1590 aa32.11■■■□□ 2.73
CHPF-202ENST00000373891 KANK4Q5T7N3 995 aaPredicted RBP32.11■■■□□ 2.73
CHPF-202ENST00000373891 NPHP4O75161 1426 aaPredicted RBP32.09■■■□□ 2.73
CHPF-202ENST00000373891 DEPDC5O75140 1603 aa32.09■■■□□ 2.73
CHPF-202ENST00000373891 IQGAP1P46940 1657 aa32.08■■■□□ 2.73
CHPF-202ENST00000373891 EIF2AK4Q9P2K8 1649 aaKnown RBP32.08■■■□□ 2.73
CHPF-202ENST00000373891 MROH1Q8NDA8 1641 aa32.08■■■□□ 2.73
CHPF-202ENST00000373891 HSPA1LP34931 641 aa32.07■■■□□ 2.72
CHPF-202ENST00000373891 TOM1O60784 492 aa32.05■■■□□ 2.72
CHPF-202ENST00000373891 STRCP1A6NGW2 1772 aa32.04■■■□□ 2.72
CHPF-202ENST00000373891 MED14O60244 1454 aa32.03■■■□□ 2.72
CHPF-202ENST00000373891 MYOM3Q5VTT5 1437 aa32.03■■■□□ 2.72
CHPF-202ENST00000373891 ERVK-7P63135 1459 aa32.03■■■□□ 2.72
CHPF-202ENST00000373891 UBR1Q8IWV7 1749 aa31.98■■■□□ 2.71
CHPF-202ENST00000373891 MED1Q15648 1581 aaPredicted RBP31.98■■■□□ 2.71
CHPF-202ENST00000373891 MAP3K1Q13233 1512 aa31.97■■■□□ 2.71
CHPF-202ENST00000373891 ALKQ9UM73 1620 aa31.96■■■□□ 2.71
CHPF-202ENST00000373891 CROCC2H7BZ55 1655 aa31.95■■■□□ 2.71
CHPF-202ENST00000373891 DUOX2Q9NRD8 1548 aa31.95■■■□□ 2.71
CHPF-202ENST00000373891 SENP3Q9H4L4 574 aaPredicted RBP31.94■■■□□ 2.7
CHPF-202ENST00000373891 KIF15Q9NS87 1388 aa31.89■■■□□ 2.7
CHPF-202ENST00000373891 PTPN23Q9H3S7 1636 aa31.89■■■□□ 2.7
CHPF-202ENST00000373891 LRRC7Q96NW7 1537 aa31.88■■■□□ 2.69
CHPF-202ENST00000373891 RRP7BPQ9NSQ0 103 aa31.87■■■□□ 2.69
CHPF-202ENST00000373891 SYNMO15061 1565 aa31.86■■■□□ 2.69
CHPF-202ENST00000373891 PRDM15P57071 1507 aaPredicted RBP31.86■■■□□ 2.69
CHPF-202ENST00000373891 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.86■■■□□ 2.69
CHPF-202ENST00000373891 ABCC5O15440 1437 aa31.85■■■□□ 2.69
CHPF-202ENST00000373891 SCAF11Q99590 1463 aaKnown RBP31.84■■■□□ 2.69
CHPF-202ENST00000373891 LTKP29376 864 aa31.81■■■□□ 2.68
CHPF-202ENST00000373891 PIK3C2BO00750 1634 aa31.81■■■□□ 2.68
CHPF-202ENST00000373891 ERBINQ96RT1 1412 aa31.81■■■□□ 2.68
CHPF-202ENST00000373891 TXNDC2Q86VQ3 553 aa31.79■■■□□ 2.68
CHPF-202ENST00000373891 DAPK1P53355 1430 aa31.78■■■□□ 2.68
CHPF-202ENST00000373891 XIRP1Q702N8 1843 aaKnown RBP31.78■■■□□ 2.68
CHPF-202ENST00000373891 ARHGAP23Q9P227 1491 aa31.78■■■□□ 2.68
CHPF-202ENST00000373891 ARHGAP31Q2M1Z3 1444 aa31.77■■■□□ 2.68
CHPF-202ENST00000373891 SLIT1O75093 1534 aa31.77■■■□□ 2.68
CHPF-202ENST00000373891 APLP2Q06481 763 aa31.77■■■□□ 2.68
CHPF-202ENST00000373891 CHIC2Q9UKJ5 165 aa31.75■■■□□ 2.67
CHPF-202ENST00000373891 PHF23Q9BUL5 403 aaPredicted RBP31.74■■■□□ 2.67
CHPF-202ENST00000373891 FGD6Q6ZV73 1430 aa31.72■■■□□ 2.67
CHPF-202ENST00000373891 STAG3Q9UJ98 1225 aa31.71■■■□□ 2.67
CHPF-202ENST00000373891 KANK1Q14678 1352 aa31.7■■■□□ 2.67
CHPF-202ENST00000373891 EID1Q9Y6B2 187 aa31.7■■■□□ 2.67
CHPF-202ENST00000373891 TMEM2Q9UHN6 1383 aa31.66■■■□□ 2.66
CHPF-202ENST00000373891 ANKRD30AQ9BXX3 1397 aa31.65■■■□□ 2.66
CHPF-202ENST00000373891 EFCAB6Q5THR3 1501 aa31.65■■■□□ 2.66
CHPF-202ENST00000373891 IDI1Q13907 227 aa31.62■■■□□ 2.65
CHPF-202ENST00000373891 KDM5AP29375 1690 aaKnown RBP31.6■■■□□ 2.65
CHPF-202ENST00000373891 LMTK2Q8IWU2 1503 aa31.6■■■□□ 2.65
CHPF-202ENST00000373891 SLC26A8Q96RN1 970 aa31.56■■■□□ 2.64
CHPF-202ENST00000373891 MYO5BQ9ULV0 1848 aa31.56■■■□□ 2.64
CHPF-202ENST00000373891 RBM33Q96EV2 1170 aaKnown RBP31.55■■■□□ 2.64
CHPF-202ENST00000373891 ADGRB3O60242 1522 aa31.54■■■□□ 2.64
CHPF-202ENST00000373891 TMEM94Q12767 1356 aa31.53■■■□□ 2.64
CHPF-202ENST00000373891 NOS1P29475 1434 aa31.52■■■□□ 2.64
CHPF-202ENST00000373891 FAM50AQ14320 339 aaKnown RBP31.52■■■□□ 2.64
CHPF-202ENST00000373891 TET3O43151 1660 aa31.51■■■□□ 2.64
CHPF-202ENST00000373891 ADGRL2O95490 1459 aa31.49■■■□□ 2.63
CHPF-202ENST00000373891 KCNA6P17658 529 aa31.48■■■□□ 2.63
CHPF-202ENST00000373891 BCANQ96GW7 911 aa31.48■■■□□ 2.63
CHPF-202ENST00000373891 ROBO1Q9Y6N7 1651 aa31.48■■■□□ 2.63
CHPF-202ENST00000373891 PROSER2Q86WR7 435 aaPredicted RBP31.47■■■□□ 2.63
CHPF-202ENST00000373891 GCC2Q8IWJ2 1684 aa31.46■■■□□ 2.63
CHPF-202ENST00000373891 FAM135BQ49AJ0 1406 aa31.43■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms