RNA–Protein interactions for RNA: ENST00000371842.2

BRD3-203, Transcript of bromodomain containing 3, humanhuman

TSL 5

Gene BRD3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-203ENST00000371842 EHBP1L1Q8N3D4 1523 aa23.71■■□□□ 1.39
BRD3-203ENST00000371842 TNRQ92752 1358 aa23.7■■□□□ 1.38
BRD3-203ENST00000371842 HSPA1LP34931 641 aa23.7■■□□□ 1.38
BRD3-203ENST00000371842 SCAF1Q9H7N4 1312 aaKnown RBP23.69■■□□□ 1.38
BRD3-203ENST00000371842 KIF3BO15066 747 aa23.69■■□□□ 1.38
BRD3-203ENST00000371842 PIP4K2BP78356 416 aa23.69■■□□□ 1.38
BRD3-203ENST00000371842 PZPP20742 1482 aa23.68■■□□□ 1.38
BRD3-203ENST00000371842 CPS1P31327 1500 aa23.68■■□□□ 1.38
BRD3-203ENST00000371842 KDM5DQ9BY66 1539 aa23.68■■□□□ 1.38
BRD3-203ENST00000371842 SHANK2Q9UPX8 1470 aa23.68■■□□□ 1.38
BRD3-203ENST00000371842 CEP162Q5TB80 1403 aa23.67■■□□□ 1.38
BRD3-203ENST00000371842 MED1Q15648 1581 aaPredicted RBP23.67■■□□□ 1.38
BRD3-203ENST00000371842 VWDEQ8N2E2 1590 aa23.65■■□□□ 1.38
BRD3-203ENST00000371842 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.65■■□□□ 1.38
BRD3-203ENST00000371842 CCDC141Q6ZP82 1450 aa23.64■■□□□ 1.38
BRD3-203ENST00000371842 TOM1O60784 492 aa23.63■■□□□ 1.37
BRD3-203ENST00000371842 CAMSAP2Q08AD1 1489 aa23.62■■□□□ 1.37
BRD3-203ENST00000371842 FAM135AQ9P2D6 1515 aa23.62■■□□□ 1.37
BRD3-203ENST00000371842 ALKQ9UM73 1620 aa23.62■■□□□ 1.37
BRD3-203ENST00000371842 WASHC2CQ9Y4E1 1318 aa23.61■■□□□ 1.37
BRD3-203ENST00000371842 ANKLE2Q86XL3 938 aa23.61■■□□□ 1.37
BRD3-203ENST00000371842 MIA2Q96PC5 1412 aa23.6■■□□□ 1.37
BRD3-203ENST00000371842 UGGT1Q9NYU2 1555 aa23.59■■□□□ 1.37
BRD3-203ENST00000371842 DEPDC5O75140 1603 aa23.59■■□□□ 1.37
BRD3-203ENST00000371842 STRCP1A6NGW2 1772 aa23.58■■□□□ 1.37
BRD3-203ENST00000371842 NCOA2Q15596 1464 aa23.58■■□□□ 1.37
BRD3-203ENST00000371842 NLRP1Q9C000 1473 aa23.58■■□□□ 1.37
BRD3-203ENST00000371842 THEMISQ8N1K5 641 aaPredicted RBP23.58■■□□□ 1.37
BRD3-203ENST00000371842 MED14O60244 1454 aa23.57■■□□□ 1.36
BRD3-203ENST00000371842 CFAP65Q6ZU64 1925 aaKnown RBP23.56■■□□□ 1.36
BRD3-203ENST00000371842 IQGAP1P46940 1657 aa23.56■■□□□ 1.36
BRD3-203ENST00000371842 NPHP4O75161 1426 aaPredicted RBP23.56■■□□□ 1.36
BRD3-203ENST00000371842 RSPH4AQ5TD94 716 aa23.54■■□□□ 1.36
BRD3-203ENST00000371842 ARHGEF5Q12774 1597 aa23.53■■□□□ 1.36
BRD3-203ENST00000371842 RNF17Q9BXT8 1623 aaKnown RBP23.51■■□□□ 1.35
BRD3-203ENST00000371842 ABCC3O15438 1527 aa23.49■■□□□ 1.35
BRD3-203ENST00000371842 LRRC7Q96NW7 1537 aa23.48■■□□□ 1.35
BRD3-203ENST00000371842 ZC3H13Q5T200 1668 aaKnown RBP23.48■■□□□ 1.35
BRD3-203ENST00000371842 TSPY4P0CV99 314 aa23.47■■□□□ 1.35
BRD3-203ENST00000371842 TSPY10P0CW01 314 aa23.47■■□□□ 1.35
BRD3-203ENST00000371842 SENP3Q9H4L4 574 aaPredicted RBP23.46■■□□□ 1.35
BRD3-203ENST00000371842 CEP152O94986 1710 aa23.45■■□□□ 1.34
BRD3-203ENST00000371842 MROH1Q8NDA8 1641 aa23.44■■□□□ 1.34
BRD3-203ENST00000371842 ERVK-7P63135 1459 aa23.44■■□□□ 1.34
BRD3-203ENST00000371842 PHF23Q9BUL5 403 aaPredicted RBP23.44■■□□□ 1.34
BRD3-203ENST00000371842 UBR1Q8IWV7 1749 aa23.44■■□□□ 1.34
BRD3-203ENST00000371842 MAST1Q9Y2H9 1570 aa23.44■■□□□ 1.34
BRD3-203ENST00000371842 SYNMO15061 1565 aa23.43■■□□□ 1.34
BRD3-203ENST00000371842 EIF2AK4Q9P2K8 1649 aaKnown RBP23.42■■□□□ 1.34
BRD3-203ENST00000371842 XIRP1Q702N8 1843 aaKnown RBP23.4■■□□□ 1.34
BRD3-203ENST00000371842 LRRC9Q6ZRR7 1453 aa23.37■■□□□ 1.33
BRD3-203ENST00000371842 LTKP29376 864 aa23.35■■□□□ 1.33
BRD3-203ENST00000371842 SCAF11Q99590 1463 aaKnown RBP23.35■■□□□ 1.33
BRD3-203ENST00000371842 ARHGAP23Q9P227 1491 aa23.32■■□□□ 1.32
BRD3-203ENST00000371842 RGS17Q9UGC6 210 aaPredicted RBP23.31■■□□□ 1.32
BRD3-203ENST00000371842 SLIT1O75093 1534 aa23.31■■□□□ 1.32
BRD3-203ENST00000371842 KANK4Q5T7N3 995 aaPredicted RBP23.3■■□□□ 1.32
BRD3-203ENST00000371842 DUOX2Q9NRD8 1548 aa23.29■■□□□ 1.32
BRD3-203ENST00000371842 TXNDC2Q86VQ3 553 aa23.29■■□□□ 1.32
BRD3-203ENST00000371842 VPS8Q8N3P4 1428 aa23.27■■□□□ 1.32
BRD3-203ENST00000371842 PRDM15P57071 1507 aaPredicted RBP23.27■■□□□ 1.32
BRD3-203ENST00000371842 PIK3C2BO00750 1634 aa23.26■■□□□ 1.31
BRD3-203ENST00000371842 MYOM3Q5VTT5 1437 aa23.26■■□□□ 1.31
BRD3-203ENST00000371842 ARHGAP31Q2M1Z3 1444 aa23.25■■□□□ 1.31
BRD3-203ENST00000371842 CROCC2H7BZ55 1655 aa23.23■■□□□ 1.31
BRD3-203ENST00000371842 KIF15Q9NS87 1388 aa23.22■■□□□ 1.31
BRD3-203ENST00000371842 EID1Q9Y6B2 187 aa23.21■■□□□ 1.31
BRD3-203ENST00000371842 MAP3K1Q13233 1512 aa23.19■■□□□ 1.3
BRD3-203ENST00000371842 TMEM2Q9UHN6 1383 aa23.19■■□□□ 1.3
BRD3-203ENST00000371842 RRP7BPQ9NSQ0 103 aa23.19■■□□□ 1.3
BRD3-203ENST00000371842 ABCC5O15440 1437 aa23.18■■□□□ 1.3
BRD3-203ENST00000371842 FAM135BQ49AJ0 1406 aa23.18■■□□□ 1.3
BRD3-203ENST00000371842 ERBINQ96RT1 1412 aa23.18■■□□□ 1.3
BRD3-203ENST00000371842 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.18■■□□□ 1.33e-11■■□□□ 12.1
BRD3-203ENST00000371842 KDM5AP29375 1690 aaKnown RBP23.16■■□□□ 1.3
BRD3-203ENST00000371842 ROBO1Q9Y6N7 1651 aa23.16■■□□□ 1.3
BRD3-203ENST00000371842 TMEM94Q12767 1356 aa23.15■■□□□ 1.3
BRD3-203ENST00000371842 LOC105371045A0A1W2PR82 267 aa23.15■■□□□ 1.3
BRD3-203ENST00000371842 PTPN23Q9H3S7 1636 aa23.15■■□□□ 1.3
BRD3-203ENST00000371842 EFCAB6Q5THR3 1501 aa23.14■■□□□ 1.3
BRD3-203ENST00000371842 TET3O43151 1660 aa23.14■■□□□ 1.29
BRD3-203ENST00000371842 POTEAQ6S8J7 498 aa23.14■■□□□ 1.29
BRD3-203ENST00000371842 RBM33Q96EV2 1170 aaKnown RBP23.14■■□□□ 1.29
BRD3-203ENST00000371842 STAG3Q9UJ98 1225 aa23.14■■□□□ 1.29
BRD3-203ENST00000371842 IDI1Q13907 227 aa23.13■■□□□ 1.29
BRD3-203ENST00000371842 KCNA6P17658 529 aa23.11■■□□□ 1.29
BRD3-203ENST00000371842 SLC26A8Q96RN1 970 aa23.11■■□□□ 1.29
BRD3-203ENST00000371842 DAPK1P53355 1430 aa23.1■■□□□ 1.29
BRD3-203ENST00000371842 LMTK2Q8IWU2 1503 aa23.09■■□□□ 1.29
BRD3-203ENST00000371842 KANK1Q14678 1352 aa23.09■■□□□ 1.29
BRD3-203ENST00000371842 PROSER2Q86WR7 435 aaPredicted RBP23.08■■□□□ 1.29
BRD3-203ENST00000371842 NWD1Q149M9 1564 aa23.06■■□□□ 1.28
BRD3-203ENST00000371842 MYO5BQ9ULV0 1848 aa23.06■■□□□ 1.28
BRD3-203ENST00000371842 ADGRB3O60242 1522 aa23.05■■□□□ 1.28
BRD3-203ENST00000371842 CHIC2Q9UKJ5 165 aa23.05■■□□□ 1.28
BRD3-203ENST00000371842 NOS1P29475 1434 aa23.05■■□□□ 1.28
BRD3-203ENST00000371842 SETD1AO15047 1707 aaKnown RBP23.03■■□□□ 1.28
BRD3-203ENST00000371842 NKTRP30414 1462 aaKnown RBP23.03■■□□□ 1.28
BRD3-203ENST00000371842 PHLPP1O60346 1717 aa23.02■■□□□ 1.28
BRD3-203ENST00000371842 CHD2O14647 1828 aaKnown RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms