RNA–Protein interactions for RNA: ENST00000371842.2

BRD3-203, Transcript of bromodomain containing 3, humanhuman

TSL 5

Gene BRD3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-203ENST00000371842 NISCHQ9Y2I1 1504 aa37.38■■■■□ 3.57
BRD3-203ENST00000371842 ABCC9O60706 1549 aa34.12■■■■□ 3.05
BRD3-203ENST00000371842 CCDC180Q9P1Z9 1646 aa33.71■■■□□ 2.99
BRD3-203ENST00000371842 DNAJC5BQ9UF47 199 aa32.41■■■□□ 2.78
BRD3-203ENST00000371842 RB1CC1Q8TDY2 1594 aa32.26■■■□□ 2.75
BRD3-203ENST00000371842 NACADO15069 1562 aa31.94■■■□□ 2.7
BRD3-203ENST00000371842 DCAF8L2P0C7V8 631 aa31.72■■■□□ 2.67
BRD3-203ENST00000371842 PABPN1Q86U42 306 aaKnown RBP eCLIP31.72■■■□□ 2.67
BRD3-203ENST00000371842 UNC13AQ9UPW8 1703 aa31.69■■■□□ 2.66
BRD3-203ENST00000371842 BICRAQ9NZM4 1560 aa31.42■■■□□ 2.62
BRD3-203ENST00000371842 MYO15BQ96JP2 1530 aa31.34■■■□□ 2.61
BRD3-203ENST00000371842 ZCCHC6Q5VYS8 1495 aaKnown RBP30.89■■■□□ 2.54
BRD3-203ENST00000371842 CC2D2AQ9P2K1 1620 aa30.82■■■□□ 2.52
BRD3-203ENST00000371842 DCAF1Q9Y4B6 1507 aa30.82■■■□□ 2.52
BRD3-203ENST00000371842 SHROOM4Q9ULL8 1493 aa30.82■■■□□ 2.52
BRD3-203ENST00000371842 CECR2Q9BXF3 1484 aa30.76■■■□□ 2.51
BRD3-203ENST00000371842 SCRIBQ14160 1630 aa30.73■■■□□ 2.51
BRD3-203ENST00000371842 EIF4G1Q04637 1599 aaKnown RBP30.64■■■□□ 2.5
BRD3-203ENST00000371842 DNAJC5Q9H3Z4 198 aa29.98■■■□□ 2.39
BRD3-203ENST00000371842 CUX2O14529 1486 aa29.51■■■□□ 2.31
BRD3-203ENST00000371842 NCAPD3P42695 1498 aa29.5■■■□□ 2.31
BRD3-203ENST00000371842 ERCC6Q03468 1493 aa29.44■■■□□ 2.3
BRD3-203ENST00000371842 ATAD2BQ9ULI0 1458 aa29.37■■■□□ 2.29
BRD3-203ENST00000371842 SMARCA4P51532 1647 aa29.27■■■□□ 2.28
BRD3-203ENST00000371842 HMGXB3Q12766 1538 aa29.25■■■□□ 2.27
BRD3-203ENST00000371842 SMARCA2P51531 1590 aa29.24■■■□□ 2.27
BRD3-203ENST00000371842 NESP48681 1621 aa29.23■■■□□ 2.27
BRD3-203ENST00000371842 BAZ1BQ9UIG0 1483 aaKnown RBP29.04■■■□□ 2.24
BRD3-203ENST00000371842 BAZ1AQ9NRL2 1556 aaPredicted RBP29.01■■■□□ 2.24
BRD3-203ENST00000371842 THOC2Q8NI27 1593 aaKnown RBP29.01■■■□□ 2.23
BRD3-203ENST00000371842 PEG3Q9GZU2 1588 aa28.96■■■□□ 2.23
BRD3-203ENST00000371842 LAMC3Q9Y6N6 1575 aa28.9■■■□□ 2.22
BRD3-203ENST00000371842 KIF21AQ7Z4S6 1674 aa28.87■■■□□ 2.21
BRD3-203ENST00000371842 MROH2BQ7Z745 1585 aa28.84■■■□□ 2.21
BRD3-203ENST00000371842 PDS5BQ9NTI5 1447 aa28.71■■■□□ 2.19
BRD3-203ENST00000371842 CADPSQ9ULU8 1353 aa28.58■■■□□ 2.17
BRD3-203ENST00000371842 TRIM41Q8WV44 630 aa28.52■■■□□ 2.16
BRD3-203ENST00000371842 MRC2Q9UBG0 1479 aa28.52■■■□□ 2.16
BRD3-203ENST00000371842 WIZO95785 1651 aa28.51■■■□□ 2.15
BRD3-203ENST00000371842 WDR62O43379 1518 aa28.48■■■□□ 2.15
BRD3-203ENST00000371842 CEP164Q9UPV0 1460 aa28.32■■■□□ 2.12
BRD3-203ENST00000371842 FANCD2Q9BXW9 1451 aa28.27■■■□□ 2.12
BRD3-203ENST00000371842 CFTRP13569 1480 aa28.19■■■□□ 2.1
BRD3-203ENST00000371842 OSCARQ8IYS5 282 aa28.1■■■□□ 2.09
BRD3-203ENST00000371842 URB2Q14146 1524 aaKnown RBP28.09■■■□□ 2.09
BRD3-203ENST00000371842 RSF1Q96T23 1441 aaPredicted RBP28.07■■■□□ 2.08
BRD3-203ENST00000371842 TOP2AP11388 1531 aaKnown RBP28.04■■■□□ 2.08
BRD3-203ENST00000371842 PRDM2Q13029 1718 aa27.95■■■□□ 2.06
BRD3-203ENST00000371842 RIMBP3CA6NJZ7 1639 aa27.85■■■□□ 2.05
BRD3-203ENST00000371842 RIMBP3BA6NNM3 1639 aa27.85■■■□□ 2.05
BRD3-203ENST00000371842 RIMBP3Q9UFD9 1639 aa27.85■■■□□ 2.05
BRD3-203ENST00000371842 ZNF608Q9ULD9 1512 aaPredicted RBP27.82■■■□□ 2.04
BRD3-203ENST00000371842 IFT140Q96RY7 1462 aa27.76■■■□□ 2.03
BRD3-203ENST00000371842 CCDC88BA6NC98 1476 aa27.75■■■□□ 2.03
BRD3-203ENST00000371842 TOPBP1Q92547 1522 aa27.71■■■□□ 2.03
BRD3-203ENST00000371842 ARHGEF11O15085 1522 aa27.7■■■□□ 2.02
BRD3-203ENST00000371842 EIF4G3O43432 1585 aaKnown RBP27.64■■■□□ 2.01
BRD3-203ENST00000371842 ABCC8Q09428 1581 aa27.56■■■□□ 2
BRD3-203ENST00000371842 DNMBPQ6XZF7 1577 aa27.56■■■□□ 2
BRD3-203ENST00000371842 CHD1O14646 1710 aa27.55■■■□□ 2
BRD3-203ENST00000371842 TARBP1Q13395 1621 aaKnown RBP27.52■■■□□ 2
BRD3-203ENST00000371842 CYB5RLQ6IPT4 315 aa27.51■■□□□ 1.99
BRD3-203ENST00000371842 AQRO60306 1485 aaKnown RBP eCLIP27.51■■□□□ 1.992e-6■■■□□ 15.2
BRD3-203ENST00000371842 ARAP1Q96P48 1450 aa27.41■■□□□ 1.98
BRD3-203ENST00000371842 POLA1P09884 1462 aaPredicted RBP27.4■■□□□ 1.98
BRD3-203ENST00000371842 FBLN2P98095 1184 aa27.37■■□□□ 1.97
BRD3-203ENST00000371842 RAD54L2Q9Y4B4 1467 aa27.33■■□□□ 1.97
BRD3-203ENST00000371842 TRHP20396 242 aaPredicted RBP27.31■■□□□ 1.96
BRD3-203ENST00000371842 TDRD9Q8NDG6 1382 aaKnown RBP27.27■■□□□ 1.96
BRD3-203ENST00000371842 SOGA1O94964 1423 aa27.24■■□□□ 1.95
BRD3-203ENST00000371842 SNAPC4Q5SXM2 1469 aa27.2■■□□□ 1.95
BRD3-203ENST00000371842 CLASP1Q7Z460 1538 aa27.17■■□□□ 1.94
BRD3-203ENST00000371842 FGD5Q6ZNL6 1462 aa27.17■■□□□ 1.94
BRD3-203ENST00000371842 WDR97A6NE52 1622 aa27.13■■□□□ 1.93
BRD3-203ENST00000371842 CUX1P39880 1505 aa27.11■■□□□ 1.93
BRD3-203ENST00000371842 SYNJ1O43426 1573 aa27.09■■□□□ 1.93
BRD3-203ENST00000371842 CHMP7Q8WUX9 453 aaPredicted RBP27.08■■□□□ 1.93
BRD3-203ENST00000371842 MAGI1Q96QZ7 1491 aaPredicted RBP27.07■■□□□ 1.92
BRD3-203ENST00000371842 GRIN2BQ13224 1484 aa27.04■■□□□ 1.92
BRD3-203ENST00000371842 SYNJ2O15056 1496 aa27■■□□□ 1.91
BRD3-203ENST00000371842 PBRM1Q86U86 1689 aa26.99■■□□□ 1.91
BRD3-203ENST00000371842 GAPVD1Q14C86 1478 aa26.92■■□□□ 1.9
BRD3-203ENST00000371842 ABCA5Q8WWZ7 1642 aa26.85■■□□□ 1.89
BRD3-203ENST00000371842 ABCA10Q8WWZ4 1543 aa26.82■■□□□ 1.88
BRD3-203ENST00000371842 ERCC6L2Q5T890 1561 aa26.78■■□□□ 1.88
BRD3-203ENST00000371842 AEBP2Q6ZN18 517 aaPredicted RBP26.77■■□□□ 1.88
BRD3-203ENST00000371842 GRIN2AQ12879 1464 aa26.71■■□□□ 1.87
BRD3-203ENST00000371842 CEP170Q5SW79 1584 aa26.67■■□□□ 1.86
BRD3-203ENST00000371842 ADAMTS12P58397 1594 aa26.67■■□□□ 1.86
BRD3-203ENST00000371842 NUP160Q12769 1436 aa26.64■■□□□ 1.85
BRD3-203ENST00000371842 WRNQ14191 1432 aaPredicted RBP eCLIP26.61■■□□□ 1.85
BRD3-203ENST00000371842 SHROOM2Q13796 1616 aa26.6■■□□□ 1.85
BRD3-203ENST00000371842 BIVM-ERCC5R4GMW8 1640 aa26.57■■□□□ 1.84
BRD3-203ENST00000371842 TOP2BQ02880 1626 aa26.55■■□□□ 1.84
BRD3-203ENST00000371842 SUPT5HO00267 1087 aaKnown RBP26.53■■□□□ 1.84
BRD3-203ENST00000371842 FHAD1B1AJZ9 1412 aa26.53■■□□□ 1.84
BRD3-203ENST00000371842 KIF13AQ9H1H9 1805 aa26.53■■□□□ 1.84
BRD3-203ENST00000371842 ERICH3Q5RHP9 1530 aa26.47■■□□□ 1.83
BRD3-203ENST00000371842 PRG4Q92954 1404 aaPredicted RBP26.41■■□□□ 1.82
BRD3-203ENST00000371842 JPH4Q96JJ6 628 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms