RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 SCAF1Q9H7N4 1312 aaKnown RBP16.48■□□□□ 0.23
EXOSC1-203ENST00000370886 KIAA1107Q9UPP5 1409 aa16.48■□□□□ 0.23
EXOSC1-203ENST00000370886 HNRNPMP52272 730 aaKnown RBP eCLIP16.48■□□□□ 0.23
EXOSC1-203ENST00000370886 A2ML1A8K2U0 1454 aa16.48■□□□□ 0.23
EXOSC1-203ENST00000370886 POLR1AO95602 1720 aaPredicted RBP16.48■□□□□ 0.23
EXOSC1-203ENST00000370886 TOM1O60784 492 aa16.47■□□□□ 0.23
EXOSC1-203ENST00000370886 ADGBQ8N7X0 1667 aa16.46■□□□□ 0.23
EXOSC1-203ENST00000370886 GGT6Q6P531 493 aa16.46■□□□□ 0.23
EXOSC1-203ENST00000370886 DNMT1P26358 1616 aaKnown RBP16.45■□□□□ 0.22
EXOSC1-203ENST00000370886 HSPA1LP34931 641 aa16.45■□□□□ 0.22
EXOSC1-203ENST00000370886 PIP4K2BP78356 416 aa16.44■□□□□ 0.22
EXOSC1-203ENST00000370886 FAM50AQ14320 339 aaKnown RBP16.43■□□□□ 0.22
EXOSC1-203ENST00000370886 MYOM3Q5VTT5 1437 aa16.43■□□□□ 0.22
EXOSC1-203ENST00000370886 PHF23Q9BUL5 403 aaPredicted RBP16.42■□□□□ 0.22
EXOSC1-203ENST00000370886 SHANK2Q9UPX8 1470 aa16.42■□□□□ 0.22
EXOSC1-203ENST00000370886 NEURL4Q96JN8 1562 aa16.4■□□□□ 0.22
EXOSC1-203ENST00000370886 FAM135AQ9P2D6 1515 aa16.39■□□□□ 0.21
EXOSC1-203ENST00000370886 TNRQ92752 1358 aa16.38■□□□□ 0.21
EXOSC1-203ENST00000370886 MIA2Q96PC5 1412 aa16.36■□□□□ 0.21
EXOSC1-203ENST00000370886 FGD6Q6ZV73 1430 aa16.36■□□□□ 0.21
EXOSC1-203ENST00000370886 PZPP20742 1482 aa16.35■□□□□ 0.21
EXOSC1-203ENST00000370886 CAMSAP2Q08AD1 1489 aa16.35■□□□□ 0.21
EXOSC1-203ENST00000370886 KDM5DQ9BY66 1539 aa16.35■□□□□ 0.21
EXOSC1-203ENST00000370886 ITGAEP38570 1179 aa16.35■□□□□ 0.21
EXOSC1-203ENST00000370886 ANKLE2Q86XL3 938 aa16.35■□□□□ 0.21
EXOSC1-203ENST00000370886 RTEL1-TNFRSF6BF6WH68 1400 aa16.35■□□□□ 0.21
EXOSC1-203ENST00000370886 VWDEQ8N2E2 1590 aa16.34■□□□□ 0.21
EXOSC1-203ENST00000370886 TSPY4P0CV99 314 aa16.34■□□□□ 0.21
EXOSC1-203ENST00000370886 TSPY10P0CW01 314 aa16.34■□□□□ 0.21
EXOSC1-203ENST00000370886 DEPDC5O75140 1603 aa16.34■□□□□ 0.21
EXOSC1-203ENST00000370886 NLRP1Q9C000 1473 aa16.33■□□□□ 0.2
EXOSC1-203ENST00000370886 DHX29Q7Z478 1369 aaKnown RBP16.32■□□□□ 0.2
EXOSC1-203ENST00000370886 THEMISQ8N1K5 641 aaPredicted RBP16.32■□□□□ 0.2
EXOSC1-203ENST00000370886 MED14O60244 1454 aa16.31■□□□□ 0.2
EXOSC1-203ENST00000370886 NPHP4O75161 1426 aaPredicted RBP16.31■□□□□ 0.2
EXOSC1-203ENST00000370886 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.31■□□□□ 0.2
EXOSC1-203ENST00000370886 RSPH4AQ5TD94 716 aa16.31■□□□□ 0.2
EXOSC1-203ENST00000370886 UGGT1Q9NYU2 1555 aa16.3■□□□□ 0.2
EXOSC1-203ENST00000370886 CHIC2Q9UKJ5 165 aa16.3■□□□□ 0.2
EXOSC1-203ENST00000370886 IQGAP1P46940 1657 aa16.3■□□□□ 0.2
EXOSC1-203ENST00000370886 RNF17Q9BXT8 1623 aaKnown RBP16.3■□□□□ 0.2
EXOSC1-203ENST00000370886 ALKQ9UM73 1620 aa16.3■□□□□ 0.2
EXOSC1-203ENST00000370886 SYNMO15061 1565 aa16.3■□□□□ 0.2
EXOSC1-203ENST00000370886 MBD5Q9P267 1494 aa16.29■□□□□ 0.2
EXOSC1-203ENST00000370886 FBXO31Q5XUX0 539 aaPredicted RBP16.29■□□□□ 0.2
EXOSC1-203ENST00000370886 KIF3BO15066 747 aa16.28■□□□□ 0.2
EXOSC1-203ENST00000370886 PTPN23Q9H3S7 1636 aa16.27■□□□□ 0.2
EXOSC1-203ENST00000370886 WASHC2CQ9Y4E1 1318 aa16.27■□□□□ 0.2
EXOSC1-203ENST00000370886 CCDC141Q6ZP82 1450 aa16.27■□□□□ 0.19
EXOSC1-203ENST00000370886 ABCC5O15440 1437 aa16.24■□□□□ 0.19
EXOSC1-203ENST00000370886 LRRC7Q96NW7 1537 aa16.24■□□□□ 0.19
EXOSC1-203ENST00000370886 RRP7BPQ9NSQ0 103 aa16.23■□□□□ 0.19
EXOSC1-203ENST00000370886 DAPK1P53355 1430 aa16.22■□□□□ 0.19
EXOSC1-203ENST00000370886 STRCP1A6NGW2 1772 aa16.22■□□□□ 0.19
EXOSC1-203ENST00000370886 ZC3H13Q5T200 1668 aaKnown RBP16.21■□□□□ 0.19
EXOSC1-203ENST00000370886 SENP3Q9H4L4 574 aaPredicted RBP16.2■□□□□ 0.18
EXOSC1-203ENST00000370886 ARHGEF5Q12774 1597 aa16.19■□□□□ 0.18
EXOSC1-203ENST00000370886 RRBP1Q9P2E9 1410 aaKnown RBP16.19■□□□□ 0.18
EXOSC1-203ENST00000370886 ERVK-7P63135 1459 aa16.16■□□□□ 0.18
EXOSC1-203ENST00000370886 ANKRD30AQ9BXX3 1397 aa16.15■□□□□ 0.18
EXOSC1-203ENST00000370886 ABCC3O15438 1527 aa16.15■□□□□ 0.18
EXOSC1-203ENST00000370886 SCAF11Q99590 1463 aaKnown RBP16.15■□□□□ 0.18
EXOSC1-203ENST00000370886 KIF15Q9NS87 1388 aa16.14■□□□□ 0.17
EXOSC1-203ENST00000370886 UBR1Q8IWV7 1749 aa16.14■□□□□ 0.17
EXOSC1-203ENST00000370886 EIF2AK4Q9P2K8 1649 aaKnown RBP16.13■□□□□ 0.17
EXOSC1-203ENST00000370886 RGS17Q9UGC6 210 aaPredicted RBP16.12■□□□□ 0.17
EXOSC1-203ENST00000370886 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.11■□□□□ 0.17
EXOSC1-203ENST00000370886 CFAP65Q6ZU64 1925 aaKnown RBP16.11■□□□□ 0.17
EXOSC1-203ENST00000370886 XIRP1Q702N8 1843 aaKnown RBP16.1■□□□□ 0.17
EXOSC1-203ENST00000370886 SLIT1O75093 1534 aa16.09■□□□□ 0.17
EXOSC1-203ENST00000370886 FAM135BQ49AJ0 1406 aa16.09■□□□□ 0.17
EXOSC1-203ENST00000370886 MAST1Q9Y2H9 1570 aa16.09■□□□□ 0.17
EXOSC1-203ENST00000370886 CEP152O94986 1710 aa16.08■□□□□ 0.17
EXOSC1-203ENST00000370886 ARHGAP23Q9P227 1491 aa16.08■□□□□ 0.16
EXOSC1-203ENST00000370886 MROH1Q8NDA8 1641 aa16.06■□□□□ 0.16
EXOSC1-203ENST00000370886 TXNDC2Q86VQ3 553 aa16.06■□□□□ 0.16
EXOSC1-203ENST00000370886 EID1Q9Y6B2 187 aa16.06■□□□□ 0.16
EXOSC1-203ENST00000370886 ROCK1Q13464 1354 aa16.05■□□□□ 0.16
EXOSC1-203ENST00000370886 LTKP29376 864 aa16.04■□□□□ 0.16
EXOSC1-203ENST00000370886 DUOX2Q9NRD8 1548 aa16.04■□□□□ 0.16
EXOSC1-203ENST00000370886 ADGRL2O95490 1459 aa16.03■□□□□ 0.16
EXOSC1-203ENST00000370886 CROCC2H7BZ55 1655 aa16.03■□□□□ 0.16
EXOSC1-203ENST00000370886 ROBO1Q9Y6N7 1651 aa16.03■□□□□ 0.16
EXOSC1-203ENST00000370886 POTEAQ6S8J7 498 aa16.03■□□□□ 0.16
EXOSC1-203ENST00000370886 ANKRD50Q9ULJ7 1429 aa16.02■□□□□ 0.16
EXOSC1-203ENST00000370886 ARHGAP31Q2M1Z3 1444 aa16.02■□□□□ 0.15
EXOSC1-203ENST00000370886 TMEM94Q12767 1356 aa16.01■□□□□ 0.15
EXOSC1-203ENST00000370886 PRDM15P57071 1507 aaPredicted RBP16■□□□□ 0.15
EXOSC1-203ENST00000370886 ERBINQ96RT1 1412 aa16■□□□□ 0.15
EXOSC1-203ENST00000370886 TMEM2Q9UHN6 1383 aa16■□□□□ 0.15
EXOSC1-203ENST00000370886 SETD1AO15047 1707 aaKnown RBP15.99■□□□□ 0.15
EXOSC1-203ENST00000370886 KDM5AP29375 1690 aaKnown RBP15.99■□□□□ 0.15
EXOSC1-203ENST00000370886 PIK3C2BO00750 1634 aa15.99■□□□□ 0.15
EXOSC1-203ENST00000370886 TRIM52Q96A61 297 aa15.99■□□□□ 0.15
EXOSC1-203ENST00000370886 STAG3Q9UJ98 1225 aa15.99■□□□□ 0.15
EXOSC1-203ENST00000370886 TRIM26Q12899 539 aaPredicted RBP15.98■□□□□ 0.15
EXOSC1-203ENST00000370886 KANK1Q14678 1352 aa15.98■□□□□ 0.15
EXOSC1-203ENST00000370886 NKTRP30414 1462 aaKnown RBP15.97■□□□□ 0.15
EXOSC1-203ENST00000370886 KCNA6P17658 529 aa15.97■□□□□ 0.15
EXOSC1-203ENST00000370886 EFCAB6Q5THR3 1501 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms