RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 NISCHQ9Y2I1 1504 aa25.68■■□□□ 1.7
EXOSC1-203ENST00000370886 ABCC9O60706 1549 aa23.61■■□□□ 1.37
EXOSC1-203ENST00000370886 CCDC180Q9P1Z9 1646 aa23.3■■□□□ 1.32
EXOSC1-203ENST00000370886 DNAJC5BQ9UF47 199 aa22.43■■□□□ 1.18
EXOSC1-203ENST00000370886 RB1CC1Q8TDY2 1594 aa22.37■■□□□ 1.17
EXOSC1-203ENST00000370886 NACADO15069 1562 aa22.11■■□□□ 1.13
EXOSC1-203ENST00000370886 PABPN1Q86U42 306 aaKnown RBP eCLIP21.87■■□□□ 1.09
EXOSC1-203ENST00000370886 UNC13AQ9UPW8 1703 aa21.83■■□□□ 1.08
EXOSC1-203ENST00000370886 DCAF8L2P0C7V8 631 aa21.8■■□□□ 1.08
EXOSC1-203ENST00000370886 MYO15BQ96JP2 1530 aa21.67■■□□□ 1.06
EXOSC1-203ENST00000370886 BICRAQ9NZM4 1560 aa21.65■■□□□ 1.06
EXOSC1-203ENST00000370886 SHROOM4Q9ULL8 1493 aa21.45■■□□□ 1.02
EXOSC1-203ENST00000370886 CECR2Q9BXF3 1484 aa21.34■■□□□ 1.01
EXOSC1-203ENST00000370886 CC2D2AQ9P2K1 1620 aa21.33■■□□□ 1.01
EXOSC1-203ENST00000370886 DCAF1Q9Y4B6 1507 aa21.23■□□□□ 0.99
EXOSC1-203ENST00000370886 ZCCHC6Q5VYS8 1495 aaKnown RBP21.2■□□□□ 0.98
EXOSC1-203ENST00000370886 EIF4G1Q04637 1599 aaKnown RBP21.2■□□□□ 0.98
EXOSC1-203ENST00000370886 SCRIBQ14160 1630 aa21.14■□□□□ 0.97
EXOSC1-203ENST00000370886 DNAJC5Q9H3Z4 198 aa20.98■□□□□ 0.95
EXOSC1-203ENST00000370886 CUX2O14529 1486 aa20.6■□□□□ 0.89
EXOSC1-203ENST00000370886 ERCC6Q03468 1493 aa20.49■□□□□ 0.87
EXOSC1-203ENST00000370886 NCAPD3P42695 1498 aa20.37■□□□□ 0.85
EXOSC1-203ENST00000370886 ATAD2BQ9ULI0 1458 aa20.24■□□□□ 0.83
EXOSC1-203ENST00000370886 HMGXB3Q12766 1538 aa20.22■□□□□ 0.83
EXOSC1-203ENST00000370886 SMARCA2P51531 1590 aa20.22■□□□□ 0.83
EXOSC1-203ENST00000370886 NESP48681 1621 aa20.14■□□□□ 0.81
EXOSC1-203ENST00000370886 SMARCA4P51532 1647 aa20.14■□□□□ 0.81
EXOSC1-203ENST00000370886 THOC2Q8NI27 1593 aaKnown RBP20.08■□□□□ 0.81
EXOSC1-203ENST00000370886 BAZ1BQ9UIG0 1483 aaKnown RBP20.05■□□□□ 0.8
EXOSC1-203ENST00000370886 LAMC3Q9Y6N6 1575 aa20.03■□□□□ 0.8
EXOSC1-203ENST00000370886 BAZ1AQ9NRL2 1556 aaPredicted RBP20■□□□□ 0.79
EXOSC1-203ENST00000370886 PEG3Q9GZU2 1588 aa19.95■□□□□ 0.78
EXOSC1-203ENST00000370886 KIF21AQ7Z4S6 1674 aa19.92■□□□□ 0.78
EXOSC1-203ENST00000370886 PDS5BQ9NTI5 1447 aa19.92■□□□□ 0.78
EXOSC1-203ENST00000370886 TRIM41Q8WV44 630 aa19.88■□□□□ 0.77
EXOSC1-203ENST00000370886 MRC2Q9UBG0 1479 aa19.76■□□□□ 0.75
EXOSC1-203ENST00000370886 MROH2BQ7Z745 1585 aa19.75■□□□□ 0.75
EXOSC1-203ENST00000370886 CADPSQ9ULU8 1353 aa19.73■□□□□ 0.75
EXOSC1-203ENST00000370886 WDR62O43379 1518 aa19.73■□□□□ 0.75
EXOSC1-203ENST00000370886 CEP164Q9UPV0 1460 aa19.61■□□□□ 0.73
EXOSC1-203ENST00000370886 OSCARQ8IYS5 282 aa19.53■□□□□ 0.72
EXOSC1-203ENST00000370886 FANCD2Q9BXW9 1451 aa19.52■□□□□ 0.72
EXOSC1-203ENST00000370886 WIZO95785 1651 aa19.5■□□□□ 0.71
EXOSC1-203ENST00000370886 CFTRP13569 1480 aa19.42■□□□□ 0.7
EXOSC1-203ENST00000370886 RSF1Q96T23 1441 aaPredicted RBP19.38■□□□□ 0.69
EXOSC1-203ENST00000370886 URB2Q14146 1524 aaKnown RBP19.35■□□□□ 0.69
EXOSC1-203ENST00000370886 RIMBP3CA6NJZ7 1639 aa19.34■□□□□ 0.69
EXOSC1-203ENST00000370886 RIMBP3BA6NNM3 1639 aa19.34■□□□□ 0.69
EXOSC1-203ENST00000370886 RIMBP3Q9UFD9 1639 aa19.34■□□□□ 0.69
EXOSC1-203ENST00000370886 TOP2AP11388 1531 aaKnown RBP19.27■□□□□ 0.68
EXOSC1-203ENST00000370886 SUPT5HO00267 1087 aaKnown RBP19.27■□□□□ 0.68
EXOSC1-203ENST00000370886 PRDM2Q13029 1718 aa19.27■□□□□ 0.68
EXOSC1-203ENST00000370886 ARHGEF11O15085 1522 aa19.25■□□□□ 0.67
EXOSC1-203ENST00000370886 IFT140Q96RY7 1462 aa19.22■□□□□ 0.67
EXOSC1-203ENST00000370886 ZNF608Q9ULD9 1512 aaPredicted RBP19.17■□□□□ 0.66
EXOSC1-203ENST00000370886 EIF4G3O43432 1585 aaKnown RBP19.1■□□□□ 0.65
EXOSC1-203ENST00000370886 TOPBP1Q92547 1522 aa19.1■□□□□ 0.65
EXOSC1-203ENST00000370886 ABCC8Q09428 1581 aa19.08■□□□□ 0.65
EXOSC1-203ENST00000370886 CYB5RLQ6IPT4 315 aa19.08■□□□□ 0.64
EXOSC1-203ENST00000370886 CHD1O14646 1710 aa19.04■□□□□ 0.64
EXOSC1-203ENST00000370886 TRHP20396 242 aaPredicted RBP19.03■□□□□ 0.64
EXOSC1-203ENST00000370886 DNMBPQ6XZF7 1577 aa19.02■□□□□ 0.63
EXOSC1-203ENST00000370886 ARAP1Q96P48 1450 aa19.01■□□□□ 0.63
EXOSC1-203ENST00000370886 CCDC88BA6NC98 1476 aa19■□□□□ 0.63
EXOSC1-203ENST00000370886 TARBP1Q13395 1621 aaKnown RBP18.96■□□□□ 0.63
EXOSC1-203ENST00000370886 AQRO60306 1485 aaKnown RBP eCLIP18.94■□□□□ 0.622e-6■■■□□ 15.2
EXOSC1-203ENST00000370886 FBLN2P98095 1184 aa18.92■□□□□ 0.62
EXOSC1-203ENST00000370886 POLA1P09884 1462 aaPredicted RBP18.88■□□□□ 0.61
EXOSC1-203ENST00000370886 AEBP2Q6ZN18 517 aaPredicted RBP18.83■□□□□ 0.6
EXOSC1-203ENST00000370886 WDR97A6NE52 1622 aa18.82■□□□□ 0.6
EXOSC1-203ENST00000370886 CLASP1Q7Z460 1538 aa18.8■□□□□ 0.6
EXOSC1-203ENST00000370886 SYNJ1O43426 1573 aa18.8■□□□□ 0.6
EXOSC1-203ENST00000370886 SNAPC4Q5SXM2 1469 aa18.78■□□□□ 0.6
EXOSC1-203ENST00000370886 RAD54L2Q9Y4B4 1467 aa18.77■□□□□ 0.59
EXOSC1-203ENST00000370886 SOGA1O94964 1423 aa18.76■□□□□ 0.59
EXOSC1-203ENST00000370886 TDRD9Q8NDG6 1382 aaKnown RBP18.76■□□□□ 0.59
EXOSC1-203ENST00000370886 MAGI1Q96QZ7 1491 aaPredicted RBP18.76■□□□□ 0.59
EXOSC1-203ENST00000370886 CHMP7Q8WUX9 453 aaPredicted RBP18.73■□□□□ 0.59
EXOSC1-203ENST00000370886 FGD5Q6ZNL6 1462 aa18.7■□□□□ 0.58
EXOSC1-203ENST00000370886 GRIN2BQ13224 1484 aa18.69■□□□□ 0.58
EXOSC1-203ENST00000370886 SYNJ2O15056 1496 aa18.67■□□□□ 0.58
EXOSC1-203ENST00000370886 GAPVD1Q14C86 1478 aa18.63■□□□□ 0.57
EXOSC1-203ENST00000370886 PBRM1Q86U86 1689 aa18.6■□□□□ 0.57
EXOSC1-203ENST00000370886 CUX1P39880 1505 aa18.59■□□□□ 0.57
EXOSC1-203ENST00000370886 ABCA5Q8WWZ7 1642 aa18.49■□□□□ 0.55
EXOSC1-203ENST00000370886 ABCA10Q8WWZ4 1543 aa18.48■□□□□ 0.55
EXOSC1-203ENST00000370886 GRIN2AQ12879 1464 aa18.45■□□□□ 0.54
EXOSC1-203ENST00000370886 ERCC6L2Q5T890 1561 aa18.42■□□□□ 0.54
EXOSC1-203ENST00000370886 CEP170Q5SW79 1584 aa18.41■□□□□ 0.54
EXOSC1-203ENST00000370886 ADAMTS12P58397 1594 aa18.39■□□□□ 0.53
EXOSC1-203ENST00000370886 NUP160Q12769 1436 aa18.39■□□□□ 0.53
EXOSC1-203ENST00000370886 SHROOM2Q13796 1616 aa18.37■□□□□ 0.53
EXOSC1-203ENST00000370886 KIF13AQ9H1H9 1805 aa18.35■□□□□ 0.53
EXOSC1-203ENST00000370886 FHAD1B1AJZ9 1412 aa18.32■□□□□ 0.52
EXOSC1-203ENST00000370886 WRNQ14191 1432 aaPredicted RBP eCLIP18.32■□□□□ 0.52
EXOSC1-203ENST00000370886 ERICH3Q5RHP9 1530 aa18.25■□□□□ 0.51
EXOSC1-203ENST00000370886 BIVM-ERCC5R4GMW8 1640 aa18.23■□□□□ 0.51
EXOSC1-203ENST00000370886 PRG4Q92954 1404 aaPredicted RBP18.23■□□□□ 0.51
EXOSC1-203ENST00000370886 TOP2BQ02880 1626 aa18.22■□□□□ 0.51
EXOSC1-203ENST00000370886 ABCC10Q5T3U5 1492 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms