RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 CAMSAP1Q5T5Y3 1602 aa17.22■□□□□ 0.35
EXOSC1-202ENST00000370885 MROH1Q8NDA8 1641 aa17.22■□□□□ 0.35
EXOSC1-202ENST00000370885 FBXO41Q8TF61 875 aa17.22■□□□□ 0.35
EXOSC1-202ENST00000370885 CROCC2H7BZ55 1655 aa17.22■□□□□ 0.35
EXOSC1-202ENST00000370885 KDM5DQ9BY66 1539 aa17.21■□□□□ 0.35
EXOSC1-202ENST00000370885 RNF17Q9BXT8 1623 aaKnown RBP17.21■□□□□ 0.35
EXOSC1-202ENST00000370885 ZNF142P52746 1687 aaPredicted RBP17.21■□□□□ 0.35
EXOSC1-202ENST00000370885 DAPK1P53355 1430 aa17.2■□□□□ 0.34
EXOSC1-202ENST00000370885 WASHC2CQ9Y4E1 1318 aa17.2■□□□□ 0.34
EXOSC1-202ENST00000370885 CEP170BQ9Y4F5 1589 aaPredicted RBP17.19■□□□□ 0.34
EXOSC1-202ENST00000370885 DNMT1P26358 1616 aaKnown RBP17.19■□□□□ 0.34
EXOSC1-202ENST00000370885 NCKAP5LQ9HCH0 1330 aa17.19■□□□□ 0.34
EXOSC1-202ENST00000370885 PZPP20742 1482 aa17.18■□□□□ 0.34
EXOSC1-202ENST00000370885 CERKQ8TCT0 537 aa17.18■□□□□ 0.34
EXOSC1-202ENST00000370885 PTPRTO14522 1441 aa17.18■□□□□ 0.34
EXOSC1-202ENST00000370885 SHANK2Q9UPX8 1470 aa17.18■□□□□ 0.34
EXOSC1-202ENST00000370885 RRP7BPQ9NSQ0 103 aa17.17■□□□□ 0.34
EXOSC1-202ENST00000370885 EIF2AK4Q9P2K8 1649 aaKnown RBP17.17■□□□□ 0.34
EXOSC1-202ENST00000370885 ABCC3O15438 1527 aa17.16■□□□□ 0.34
EXOSC1-202ENST00000370885 DUOX2Q9NRD8 1548 aa17.16■□□□□ 0.34
EXOSC1-202ENST00000370885 FAM135AQ9P2D6 1515 aa17.16■□□□□ 0.34
EXOSC1-202ENST00000370885 KIF15Q9NS87 1388 aa17.16■□□□□ 0.34
EXOSC1-202ENST00000370885 CHIC2Q9UKJ5 165 aa17.15■□□□□ 0.34
EXOSC1-202ENST00000370885 DMRT2Q9Y5R5 561 aa17.15■□□□□ 0.34
EXOSC1-202ENST00000370885 TNRQ92752 1358 aa17.15■□□□□ 0.34
EXOSC1-202ENST00000370885 A2ML1A8K2U0 1454 aa17.14■□□□□ 0.33
EXOSC1-202ENST00000370885 CEP152O94986 1710 aa17.14■□□□□ 0.33
EXOSC1-202ENST00000370885 LTBP4Q8N2S1 1624 aa17.13■□□□□ 0.33
EXOSC1-202ENST00000370885 PLA2R1Q13018 1463 aa17.12■□□□□ 0.33
EXOSC1-202ENST00000370885 PPARGC1BQ86YN6 1023 aaKnown RBP17.11■□□□□ 0.33
EXOSC1-202ENST00000370885 ZC3H13Q5T200 1668 aaKnown RBP17.1■□□□□ 0.33
EXOSC1-202ENST00000370885 CFAP65Q6ZU64 1925 aaKnown RBP17.1■□□□□ 0.33
EXOSC1-202ENST00000370885 ERBINQ96RT1 1412 aa17.1■□□□□ 0.33
EXOSC1-202ENST00000370885 PRDM15P57071 1507 aaPredicted RBP17.09■□□□□ 0.33
EXOSC1-202ENST00000370885 SPATA31D1Q6ZQQ2 1576 aa17.09■□□□□ 0.33
EXOSC1-202ENST00000370885 DEPDC5O75140 1603 aa17.08■□□□□ 0.32
EXOSC1-202ENST00000370885 FAM50AQ14320 339 aaKnown RBP17.08■□□□□ 0.32
EXOSC1-202ENST00000370885 ERVK-7P63135 1459 aa17.07■□□□□ 0.32
EXOSC1-202ENST00000370885 NEURL4Q96JN8 1562 aa17.06■□□□□ 0.32
EXOSC1-202ENST00000370885 ADGRL2O95490 1459 aa17.06■□□□□ 0.32
EXOSC1-202ENST00000370885 ANKRD30AQ9BXX3 1397 aa17.06■□□□□ 0.32
EXOSC1-202ENST00000370885 ZNF335Q9H4Z2 1342 aaPredicted RBP17.06■□□□□ 0.32
EXOSC1-202ENST00000370885 PKD2Q13563 968 aa17.06■□□□□ 0.32
EXOSC1-202ENST00000370885 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.06■□□□□ 0.32
EXOSC1-202ENST00000370885 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.05■□□□□ 0.32
EXOSC1-202ENST00000370885 NLRP1Q9C000 1473 aa17.05■□□□□ 0.32
EXOSC1-202ENST00000370885 VWDEQ8N2E2 1590 aa17.04■□□□□ 0.32
EXOSC1-202ENST00000370885 UGGT1Q9NYU2 1555 aa17.03■□□□□ 0.32
EXOSC1-202ENST00000370885 POLR1AO95602 1720 aaPredicted RBP17.02■□□□□ 0.32
EXOSC1-202ENST00000370885 ARHGAP31Q2M1Z3 1444 aa17.02■□□□□ 0.31
EXOSC1-202ENST00000370885 THEMISQ8N1K5 641 aaPredicted RBP16.99■□□□□ 0.31
EXOSC1-202ENST00000370885 LMTK2Q8IWU2 1503 aa16.99■□□□□ 0.31
EXOSC1-202ENST00000370885 UBR1Q8IWV7 1749 aa16.99■□□□□ 0.31
EXOSC1-202ENST00000370885 ANKRD50Q9ULJ7 1429 aa16.97■□□□□ 0.31
EXOSC1-202ENST00000370885 ANKLE2Q86XL3 938 aa16.97■□□□□ 0.31
EXOSC1-202ENST00000370885 MED14O60244 1454 aa16.96■□□□□ 0.31
EXOSC1-202ENST00000370885 SYNMO15061 1565 aa16.95■□□□□ 0.3
EXOSC1-202ENST00000370885 KANK1Q14678 1352 aa16.94■□□□□ 0.3
EXOSC1-202ENST00000370885 LTKP29376 864 aa16.94■□□□□ 0.3
EXOSC1-202ENST00000370885 PIK3C2BO00750 1634 aa16.94■□□□□ 0.3
EXOSC1-202ENST00000370885 EFCAB6Q5THR3 1501 aa16.94■□□□□ 0.3
EXOSC1-202ENST00000370885 NPHP4O75161 1426 aaPredicted RBP16.94■□□□□ 0.3
EXOSC1-202ENST00000370885 IDI1Q13907 227 aa16.93■□□□□ 0.3
EXOSC1-202ENST00000370885 IQSEC2Q5JU85 1478 aa16.93■□□□□ 0.3
EXOSC1-202ENST00000370885 ITGAEP38570 1179 aa16.92■□□□□ 0.3
EXOSC1-202ENST00000370885 NOS1P29475 1434 aa16.92■□□□□ 0.3
EXOSC1-202ENST00000370885 ARHGAP23Q9P227 1491 aa16.92■□□□□ 0.3
EXOSC1-202ENST00000370885 IQGAP1P46940 1657 aa16.91■□□□□ 0.3
EXOSC1-202ENST00000370885 ROCK1Q13464 1354 aa16.91■□□□□ 0.3
EXOSC1-202ENST00000370885 STRCP1A6NGW2 1772 aa16.91■□□□□ 0.3
EXOSC1-202ENST00000370885 SLIT1O75093 1534 aa16.91■□□□□ 0.3
EXOSC1-202ENST00000370885 UNC13BO14795 1591 aa16.9■□□□□ 0.3
EXOSC1-202ENST00000370885 TXNDC2Q86VQ3 553 aa16.87■□□□□ 0.29
EXOSC1-202ENST00000370885 TET3O43151 1660 aa16.87■□□□□ 0.29
EXOSC1-202ENST00000370885 SCAF11Q99590 1463 aaKnown RBP16.86■□□□□ 0.29
EXOSC1-202ENST00000370885 TMEM2Q9UHN6 1383 aa16.86■□□□□ 0.29
EXOSC1-202ENST00000370885 RRBP1Q9P2E9 1410 aaKnown RBP16.86■□□□□ 0.29
EXOSC1-202ENST00000370885 E9PCH4 1651 aa16.85■□□□□ 0.29
EXOSC1-202ENST00000370885 UBAP1LF5GYI3 381 aa16.84■□□□□ 0.29
EXOSC1-202ENST00000370885 CPS1P31327 1500 aa16.84■□□□□ 0.29
EXOSC1-202ENST00000370885 KDM5AP29375 1690 aaKnown RBP16.84■□□□□ 0.29
EXOSC1-202ENST00000370885 GCC2Q8IWJ2 1684 aa16.84■□□□□ 0.29
EXOSC1-202ENST00000370885 RPRD2Q5VT52 1461 aaKnown RBP16.83■□□□□ 0.28
EXOSC1-202ENST00000370885 IQGAP3Q86VI3 1631 aa16.83■□□□□ 0.28
EXOSC1-202ENST00000370885 ALKQ9UM73 1620 aa16.83■□□□□ 0.28
EXOSC1-202ENST00000370885 MYO5BQ9ULV0 1848 aa16.82■□□□□ 0.28
EXOSC1-202ENST00000370885 ADGRB3O60242 1522 aa16.82■□□□□ 0.28
EXOSC1-202ENST00000370885 LRRC7Q96NW7 1537 aa16.8■□□□□ 0.28
EXOSC1-202ENST00000370885 SLC52A1Q9NWF4 448 aa16.8■□□□□ 0.28
EXOSC1-202ENST00000370885 STAG3Q9UJ98 1225 aa16.8■□□□□ 0.28
EXOSC1-202ENST00000370885 NUP155O75694 1391 aa16.79■□□□□ 0.28
EXOSC1-202ENST00000370885 TMEM131LA2VDJ0 1609 aa16.78■□□□□ 0.28
EXOSC1-202ENST00000370885 SENP3Q9H4L4 574 aaPredicted RBP16.77■□□□□ 0.28
EXOSC1-202ENST00000370885 EID1Q9Y6B2 187 aa16.77■□□□□ 0.28
EXOSC1-202ENST00000370885 ZFYVE9O95405 1425 aa16.77■□□□□ 0.27
EXOSC1-202ENST00000370885 NAIPQ13075 1403 aa16.77■□□□□ 0.27
EXOSC1-202ENST00000370885 XIRP1Q702N8 1843 aaKnown RBP16.76■□□□□ 0.27
EXOSC1-202ENST00000370885 SLC26A8Q96RN1 970 aa16.76■□□□□ 0.27
EXOSC1-202ENST00000370885 PIP4K2BP78356 416 aa16.74■□□□□ 0.27
EXOSC1-202ENST00000370885 RIMS2Q9UQ26 1411 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms