RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 NISCHQ9Y2I1 1504 aa27.39■■□□□ 1.98
EXOSC1-202ENST00000370885 CCDC180Q9P1Z9 1646 aa24.41■■□□□ 1.5
EXOSC1-202ENST00000370885 ABCC9O60706 1549 aa24.27■■□□□ 1.48
EXOSC1-202ENST00000370885 RB1CC1Q8TDY2 1594 aa23.12■■□□□ 1.29
EXOSC1-202ENST00000370885 NACADO15069 1562 aa23.02■■□□□ 1.28
EXOSC1-202ENST00000370885 DCAF8L2P0C7V8 631 aa23■■□□□ 1.27
EXOSC1-202ENST00000370885 MYO15BQ96JP2 1530 aa22.78■■□□□ 1.24
EXOSC1-202ENST00000370885 ZCCHC6Q5VYS8 1495 aaKnown RBP22.74■■□□□ 1.23
EXOSC1-202ENST00000370885 UNC13AQ9UPW8 1703 aa22.71■■□□□ 1.23
EXOSC1-202ENST00000370885 DNAJC5BQ9UF47 199 aa22.7■■□□□ 1.22
EXOSC1-202ENST00000370885 PABPN1Q86U42 306 aaKnown RBP eCLIP22.67■■□□□ 1.22
EXOSC1-202ENST00000370885 DCAF1Q9Y4B6 1507 aa22.59■■□□□ 1.21
EXOSC1-202ENST00000370885 BICRAQ9NZM4 1560 aa22.57■■□□□ 1.2
EXOSC1-202ENST00000370885 SCRIBQ14160 1630 aa22.32■■□□□ 1.16
EXOSC1-202ENST00000370885 SHROOM4Q9ULL8 1493 aa22.1■■□□□ 1.13
EXOSC1-202ENST00000370885 EIF4G1Q04637 1599 aaKnown RBP21.93■■□□□ 1.1
EXOSC1-202ENST00000370885 CC2D2AQ9P2K1 1620 aa21.93■■□□□ 1.1
EXOSC1-202ENST00000370885 CECR2Q9BXF3 1484 aa21.81■■□□□ 1.08
EXOSC1-202ENST00000370885 SMARCA4P51532 1647 aa21.31■■□□□ 1
EXOSC1-202ENST00000370885 NCAPD3P42695 1498 aa21.3■■□□□ 1
EXOSC1-202ENST00000370885 ATAD2BQ9ULI0 1458 aa21.28■■□□□ 1
EXOSC1-202ENST00000370885 BAZ1AQ9NRL2 1556 aaPredicted RBP21.19■□□□□ 0.98
EXOSC1-202ENST00000370885 SMARCA2P51531 1590 aa21.16■□□□□ 0.98
EXOSC1-202ENST00000370885 MROH2BQ7Z745 1585 aa21.16■□□□□ 0.98
EXOSC1-202ENST00000370885 HMGXB3Q12766 1538 aa21.13■□□□□ 0.97
EXOSC1-202ENST00000370885 PEG3Q9GZU2 1588 aa21.09■□□□□ 0.97
EXOSC1-202ENST00000370885 BAZ1BQ9UIG0 1483 aaKnown RBP21.04■□□□□ 0.96
EXOSC1-202ENST00000370885 NESP48681 1621 aa20.96■□□□□ 0.95
EXOSC1-202ENST00000370885 WIZO95785 1651 aa20.9■□□□□ 0.94
EXOSC1-202ENST00000370885 ERCC6Q03468 1493 aa20.85■□□□□ 0.93
EXOSC1-202ENST00000370885 RSF1Q96T23 1441 aaPredicted RBP20.78■□□□□ 0.92
EXOSC1-202ENST00000370885 CUX2O14529 1486 aa20.75■□□□□ 0.91
EXOSC1-202ENST00000370885 LAMC3Q9Y6N6 1575 aa20.73■□□□□ 0.91
EXOSC1-202ENST00000370885 THOC2Q8NI27 1593 aaKnown RBP20.66■□□□□ 0.9
EXOSC1-202ENST00000370885 KIF21AQ7Z4S6 1674 aa20.66■□□□□ 0.9
EXOSC1-202ENST00000370885 CADPSQ9ULU8 1353 aa20.65■□□□□ 0.9
EXOSC1-202ENST00000370885 TOP2AP11388 1531 aaKnown RBP20.59■□□□□ 0.89
EXOSC1-202ENST00000370885 PDS5BQ9NTI5 1447 aa20.59■□□□□ 0.89
EXOSC1-202ENST00000370885 DNAJC5Q9H3Z4 198 aa20.55■□□□□ 0.88
EXOSC1-202ENST00000370885 CFTRP13569 1480 aa20.48■□□□□ 0.87
EXOSC1-202ENST00000370885 MRC2Q9UBG0 1479 aa20.43■□□□□ 0.86
EXOSC1-202ENST00000370885 FANCD2Q9BXW9 1451 aa20.42■□□□□ 0.86
EXOSC1-202ENST00000370885 CCDC88BA6NC98 1476 aa20.41■□□□□ 0.86
EXOSC1-202ENST00000370885 WDR62O43379 1518 aa20.4■□□□□ 0.86
EXOSC1-202ENST00000370885 CEP164Q9UPV0 1460 aa20.38■□□□□ 0.85
EXOSC1-202ENST00000370885 URB2Q14146 1524 aaKnown RBP20.29■□□□□ 0.84
EXOSC1-202ENST00000370885 PRDM2Q13029 1718 aa20.25■□□□□ 0.83
EXOSC1-202ENST00000370885 TOPBP1Q92547 1522 aa20.08■□□□□ 0.81
EXOSC1-202ENST00000370885 ZNF608Q9ULD9 1512 aaPredicted RBP20.02■□□□□ 0.8
EXOSC1-202ENST00000370885 SUPT5HO00267 1087 aaKnown RBP20.01■□□□□ 0.79
EXOSC1-202ENST00000370885 DNMBPQ6XZF7 1577 aa19.99■□□□□ 0.79
EXOSC1-202ENST00000370885 IFT140Q96RY7 1462 aa19.98■□□□□ 0.79
EXOSC1-202ENST00000370885 ABCC8Q09428 1581 aa19.95■□□□□ 0.78
EXOSC1-202ENST00000370885 TARBP1Q13395 1621 aaKnown RBP19.91■□□□□ 0.78
EXOSC1-202ENST00000370885 POLA1P09884 1462 aaPredicted RBP19.89■□□□□ 0.77
EXOSC1-202ENST00000370885 EIF4G3O43432 1585 aaKnown RBP19.86■□□□□ 0.77
EXOSC1-202ENST00000370885 RAD54L2Q9Y4B4 1467 aa19.86■□□□□ 0.77
EXOSC1-202ENST00000370885 OSCARQ8IYS5 282 aa19.85■□□□□ 0.77
EXOSC1-202ENST00000370885 CUX1P39880 1505 aa19.85■□□□□ 0.77
EXOSC1-202ENST00000370885 AQRO60306 1485 aaKnown RBP eCLIP19.85■□□□□ 0.772e-6■■■□□ 15.2
EXOSC1-202ENST00000370885 FGD5Q6ZNL6 1462 aa19.79■□□□□ 0.76
EXOSC1-202ENST00000370885 SOGA1O94964 1423 aa19.78■□□□□ 0.76
EXOSC1-202ENST00000370885 TDRD9Q8NDG6 1382 aaKnown RBP19.76■□□□□ 0.75
EXOSC1-202ENST00000370885 TRIM41Q8WV44 630 aa19.72■□□□□ 0.75
EXOSC1-202ENST00000370885 CHD1O14646 1710 aa19.68■□□□□ 0.74
EXOSC1-202ENST00000370885 WDR97A6NE52 1622 aa19.65■□□□□ 0.74
EXOSC1-202ENST00000370885 RIMBP3CA6NJZ7 1639 aa19.62■□□□□ 0.73
EXOSC1-202ENST00000370885 RIMBP3BA6NNM3 1639 aa19.62■□□□□ 0.73
EXOSC1-202ENST00000370885 RIMBP3Q9UFD9 1639 aa19.62■□□□□ 0.73
EXOSC1-202ENST00000370885 SNAPC4Q5SXM2 1469 aa19.61■□□□□ 0.73
EXOSC1-202ENST00000370885 FBLN2P98095 1184 aa19.6■□□□□ 0.73
EXOSC1-202ENST00000370885 SYNJ1O43426 1573 aa19.58■□□□□ 0.73
EXOSC1-202ENST00000370885 ARHGEF11O15085 1522 aa19.57■□□□□ 0.72
EXOSC1-202ENST00000370885 ABCA10Q8WWZ4 1543 aa19.56■□□□□ 0.72
EXOSC1-202ENST00000370885 GRIN2BQ13224 1484 aa19.56■□□□□ 0.72
EXOSC1-202ENST00000370885 BIVM-ERCC5R4GMW8 1640 aa19.55■□□□□ 0.72
EXOSC1-202ENST00000370885 TOP2BQ02880 1626 aa19.54■□□□□ 0.72
EXOSC1-202ENST00000370885 WRNQ14191 1432 aaPredicted RBP eCLIP19.54■□□□□ 0.72
EXOSC1-202ENST00000370885 ABCA5Q8WWZ7 1642 aa19.54■□□□□ 0.72
EXOSC1-202ENST00000370885 GAPVD1Q14C86 1478 aa19.54■□□□□ 0.72
EXOSC1-202ENST00000370885 PBRM1Q86U86 1689 aa19.52■□□□□ 0.72
EXOSC1-202ENST00000370885 MAGI1Q96QZ7 1491 aaPredicted RBP19.52■□□□□ 0.72
EXOSC1-202ENST00000370885 CHMP7Q8WUX9 453 aaPredicted RBP19.48■□□□□ 0.71
EXOSC1-202ENST00000370885 SYNJ2O15056 1496 aa19.47■□□□□ 0.71
EXOSC1-202ENST00000370885 CLASP1Q7Z460 1538 aa19.46■□□□□ 0.71
EXOSC1-202ENST00000370885 ARAP1Q96P48 1450 aa19.42■□□□□ 0.7
EXOSC1-202ENST00000370885 CYB5RLQ6IPT4 315 aa19.42■□□□□ 0.7
EXOSC1-202ENST00000370885 ADAMTS12P58397 1594 aa19.36■□□□□ 0.69
EXOSC1-202ENST00000370885 GRIN2AQ12879 1464 aa19.33■□□□□ 0.68
EXOSC1-202ENST00000370885 ERICH3Q5RHP9 1530 aa19.3■□□□□ 0.68
EXOSC1-202ENST00000370885 CEP170Q5SW79 1584 aa19.29■□□□□ 0.68
EXOSC1-202ENST00000370885 FHAD1B1AJZ9 1412 aa19.28■□□□□ 0.68
EXOSC1-202ENST00000370885 NUP160Q12769 1436 aa19.27■□□□□ 0.68
EXOSC1-202ENST00000370885 ERCC6L2Q5T890 1561 aa19.26■□□□□ 0.67
EXOSC1-202ENST00000370885 IGF1RP08069 1367 aa19.18■□□□□ 0.66
EXOSC1-202ENST00000370885 SHROOM2Q13796 1616 aa19.17■□□□□ 0.66
EXOSC1-202ENST00000370885 KIF27Q86VH2 1401 aa19.12■□□□□ 0.65
EXOSC1-202ENST00000370885 RUSC2Q8N2Y8 1516 aa19.08■□□□□ 0.64
EXOSC1-202ENST00000370885 TRHP20396 242 aaPredicted RBP19.07■□□□□ 0.64
EXOSC1-202ENST00000370885 JPH4Q96JJ6 628 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms