RNA–Protein interactions for RNA: ENST00000370126.1

RTCA-202, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-202ENST00000370126 APLP2Q06481 763 aa33.96■■■■□ 3.03
RTCA-202ENST00000370126 CAMSAP1Q5T5Y3 1602 aa33.95■■■■□ 3.03
RTCA-202ENST00000370126 CEP170BQ9Y4F5 1589 aaPredicted RBP33.94■■■■□ 3.02
RTCA-202ENST00000370126 CERKQ8TCT0 537 aa33.93■■■■□ 3.02
RTCA-202ENST00000370126 RNF17Q9BXT8 1623 aaKnown RBP33.89■■■■□ 3.02
RTCA-202ENST00000370126 PTPN23Q9H3S7 1636 aa33.88■■■■□ 3.01
RTCA-202ENST00000370126 EIF2AK4Q9P2K8 1649 aaKnown RBP33.87■■■■□ 3.01
RTCA-202ENST00000370126 PZPP20742 1482 aa33.87■■■■□ 3.01
RTCA-202ENST00000370126 CROCC2H7BZ55 1655 aa33.86■■■■□ 3.01
RTCA-202ENST00000370126 WASHC2CQ9Y4E1 1318 aa33.84■■■■□ 3.01
RTCA-202ENST00000370126 PLA2R1Q13018 1463 aa33.84■■■■□ 3.01
RTCA-202ENST00000370126 A2ML1A8K2U0 1454 aa33.82■■■■□ 3
RTCA-202ENST00000370126 SHANK2Q9UPX8 1470 aa33.82■■■■□ 3
RTCA-202ENST00000370126 FGD6Q6ZV73 1430 aa33.8■■■■□ 3
RTCA-202ENST00000370126 ABCC5O15440 1437 aa33.79■■■■□ 3
RTCA-202ENST00000370126 DUOX2Q9NRD8 1548 aa33.79■■■■□ 3
RTCA-202ENST00000370126 TNRQ92752 1358 aa33.79■■■■□ 3
RTCA-202ENST00000370126 TCOF1Q13428 1488 aaKnown RBP33.79■■■■□ 3
RTCA-202ENST00000370126 ZC3H13Q5T200 1668 aaKnown RBP33.79■■■■□ 3
RTCA-202ENST00000370126 DNMT1P26358 1616 aaKnown RBP33.79■■■■□ 3
RTCA-202ENST00000370126 FBXO31Q5XUX0 539 aaPredicted RBP33.78■■■■□ 3
RTCA-202ENST00000370126 MROH1Q8NDA8 1641 aa33.77■■■■□ 3
RTCA-202ENST00000370126 ABCC3O15438 1527 aa33.77■■■■□ 3
RTCA-202ENST00000370126 NCKAP5LQ9HCH0 1330 aa33.77■■■■□ 3
RTCA-202ENST00000370126 LTBP4Q8N2S1 1624 aa33.75■■■□□ 2.99
RTCA-202ENST00000370126 DAPK1P53355 1430 aa33.74■■■□□ 2.99
RTCA-202ENST00000370126 PKD2Q13563 968 aa33.73■■■□□ 2.99
RTCA-202ENST00000370126 KIF15Q9NS87 1388 aa33.72■■■□□ 2.99
RTCA-202ENST00000370126 CEP152O94986 1710 aa33.68■■■□□ 2.98
RTCA-202ENST00000370126 ERBINQ96RT1 1412 aa33.68■■■□□ 2.98
RTCA-202ENST00000370126 NLRP1Q9C000 1473 aa33.67■■■□□ 2.98
RTCA-202ENST00000370126 SPATA31D1Q6ZQQ2 1576 aa33.64■■■□□ 2.98
RTCA-202ENST00000370126 PRDM15P57071 1507 aaPredicted RBP33.64■■■□□ 2.98
RTCA-202ENST00000370126 POLR1AO95602 1720 aaPredicted RBP33.64■■■□□ 2.98
RTCA-202ENST00000370126 RRP7BPQ9NSQ0 103 aa33.63■■■□□ 2.97
RTCA-202ENST00000370126 ERVK-7P63135 1459 aa33.6■■■□□ 2.97
RTCA-202ENST00000370126 DEPDC5O75140 1603 aa33.6■■■□□ 2.97
RTCA-202ENST00000370126 IQSEC2Q5JU85 1478 aa33.59■■■□□ 2.97
RTCA-202ENST00000370126 NEURL4Q96JN8 1562 aa33.59■■■□□ 2.97
RTCA-202ENST00000370126 UGGT1Q9NYU2 1555 aa33.59■■■□□ 2.97
RTCA-202ENST00000370126 ANKRD30AQ9BXX3 1397 aa33.57■■■□□ 2.96
RTCA-202ENST00000370126 ZNF335Q9H4Z2 1342 aaPredicted RBP33.56■■■□□ 2.96
RTCA-202ENST00000370126 CHIC2Q9UKJ5 165 aa33.54■■■□□ 2.96
RTCA-202ENST00000370126 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.53■■■□□ 2.96
RTCA-202ENST00000370126 THEMISQ8N1K5 641 aaPredicted RBP33.53■■■□□ 2.96
RTCA-202ENST00000370126 CFAP65Q6ZU64 1925 aaKnown RBP33.53■■■□□ 2.96
RTCA-202ENST00000370126 ADGRL2O95490 1459 aa33.51■■■□□ 2.96
RTCA-202ENST00000370126 ARHGAP31Q2M1Z3 1444 aa33.51■■■□□ 2.95
RTCA-202ENST00000370126 FAM50AQ14320 339 aaKnown RBP33.48■■■□□ 2.95
RTCA-202ENST00000370126 ANKLE2Q86XL3 938 aa33.47■■■□□ 2.95
RTCA-202ENST00000370126 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.46■■■□□ 2.95
RTCA-202ENST00000370126 VWDEQ8N2E2 1590 aa33.45■■■□□ 2.95
RTCA-202ENST00000370126 KANK1Q14678 1352 aa33.45■■■□□ 2.94
RTCA-202ENST00000370126 UBR1Q8IWV7 1749 aa33.44■■■□□ 2.94
RTCA-202ENST00000370126 MED14O60244 1454 aa33.44■■■□□ 2.94
RTCA-202ENST00000370126 LMTK2Q8IWU2 1503 aa33.43■■■□□ 2.94
RTCA-202ENST00000370126 NPHP4O75161 1426 aaPredicted RBP33.4■■■□□ 2.94
RTCA-202ENST00000370126 IQGAP1P46940 1657 aa33.39■■■□□ 2.94
RTCA-202ENST00000370126 CPS1P31327 1500 aa33.34■■■□□ 2.93
RTCA-202ENST00000370126 ANKRD50Q9ULJ7 1429 aa33.34■■■□□ 2.93
RTCA-202ENST00000370126 EFCAB6Q5THR3 1501 aa33.33■■■□□ 2.93
RTCA-202ENST00000370126 PIK3C2BO00750 1634 aa33.31■■■□□ 2.92
RTCA-202ENST00000370126 ARHGAP23Q9P227 1491 aa33.3■■■□□ 2.92
RTCA-202ENST00000370126 SLIT1O75093 1534 aa33.29■■■□□ 2.92
RTCA-202ENST00000370126 SYNMO15061 1565 aa33.27■■■□□ 2.92
RTCA-202ENST00000370126 SCAF11Q99590 1463 aaKnown RBP33.27■■■□□ 2.92
RTCA-202ENST00000370126 UBAP1LF5GYI3 381 aa33.26■■■□□ 2.91
RTCA-202ENST00000370126 KDM5AP29375 1690 aaKnown RBP33.26■■■□□ 2.91
RTCA-202ENST00000370126 NOS1P29475 1434 aa33.24■■■□□ 2.91
RTCA-202ENST00000370126 ROCK1Q13464 1354 aa33.22■■■□□ 2.91
RTCA-202ENST00000370126 UNC13BO14795 1591 aa33.21■■■□□ 2.91
RTCA-202ENST00000370126 TET3O43151 1660 aa33.2■■■□□ 2.91
RTCA-202ENST00000370126 LTKP29376 864 aa33.2■■■□□ 2.91
RTCA-202ENST00000370126 STRCP1A6NGW2 1772 aa33.19■■■□□ 2.9
RTCA-202ENST00000370126 RPRD2Q5VT52 1461 aaKnown RBP33.18■■■□□ 2.9
RTCA-202ENST00000370126 PPARGC1BQ86YN6 1023 aaKnown RBP33.18■■■□□ 2.9
RTCA-202ENST00000370126 TMEM2Q9UHN6 1383 aa33.18■■■□□ 2.9
RTCA-202ENST00000370126 IDI1Q13907 227 aa33.17■■■□□ 2.9
RTCA-202ENST00000370126 TXNDC2Q86VQ3 553 aa33.17■■■□□ 2.9
RTCA-202ENST00000370126 GCC2Q8IWJ2 1684 aa33.15■■■□□ 2.9
RTCA-202ENST00000370126 STAG3Q9UJ98 1225 aa33.15■■■□□ 2.9
RTCA-202ENST00000370126 ADGRB3O60242 1522 aa33.14■■■□□ 2.9
RTCA-202ENST00000370126 EID1Q9Y6B2 187 aa33.13■■■□□ 2.89
RTCA-202ENST00000370126 SLC52A1Q9NWF4 448 aa33.09■■■□□ 2.89
RTCA-202ENST00000370126 LRRC7Q96NW7 1537 aa33.08■■■□□ 2.89
RTCA-202ENST00000370126 IQGAP3Q86VI3 1631 aa33.08■■■□□ 2.89
RTCA-202ENST00000370126 ITGAEP38570 1179 aa33.07■■■□□ 2.88
RTCA-202ENST00000370126 TOM1O60784 492 aa33.06■■■□□ 2.88
RTCA-202ENST00000370126 E9PCH4 1651 aa33.05■■■□□ 2.88
RTCA-202ENST00000370126 ALKQ9UM73 1620 aa33.03■■■□□ 2.88
RTCA-202ENST00000370126 DISP3Q9P2K9 1392 aa33.01■■■□□ 2.88
RTCA-202ENST00000370126 MYO5BQ9ULV0 1848 aa33.01■■■□□ 2.87
RTCA-202ENST00000370126 RRBP1Q9P2E9 1410 aaKnown RBP33■■■□□ 2.87
RTCA-202ENST00000370126 PIP4K2BP78356 416 aa32.99■■■□□ 2.87
RTCA-202ENST00000370126 SCAF1Q9H7N4 1312 aaKnown RBP32.99■■■□□ 2.87
RTCA-202ENST00000370126 TMEM131LA2VDJ0 1609 aa32.98■■■□□ 2.87
RTCA-202ENST00000370126 NUP155O75694 1391 aa32.96■■■□□ 2.87
RTCA-202ENST00000370126 XIRP1Q702N8 1843 aaKnown RBP32.94■■■□□ 2.86
RTCA-202ENST00000370126 ZFYVE9O95405 1425 aa32.94■■■□□ 2.86
RTCA-202ENST00000370126 HSPA1LP34931 641 aa32.91■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms