RNA–Protein interactions for RNA: ENST00000370110.5

NPM3-201, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM3, Length 877 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-201ENST00000370110 MAP3K1Q13233 1512 aa29.32■■■□□ 2.28
NPM3-201ENST00000370110 LRRC9Q6ZRR7 1453 aa29.31■■■□□ 2.28
NPM3-201ENST00000370110 PKD2Q13563 968 aa29.31■■■□□ 2.28
NPM3-201ENST00000370110 DNMT1P26358 1616 aaKnown RBP29.31■■■□□ 2.28
NPM3-201ENST00000370110 A2ML1A8K2U0 1454 aa29.3■■■□□ 2.28
NPM3-201ENST00000370110 KIF3BO15066 747 aa29.28■■■□□ 2.28
NPM3-201ENST00000370110 SPATA31D1Q6ZQQ2 1576 aa29.27■■■□□ 2.28
NPM3-201ENST00000370110 FBXO31Q5XUX0 539 aaPredicted RBP29.27■■■□□ 2.28
NPM3-201ENST00000370110 KDM5DQ9BY66 1539 aa29.25■■■□□ 2.27
NPM3-201ENST00000370110 PZPP20742 1482 aa29.23■■■□□ 2.27
NPM3-201ENST00000370110 TNRQ92752 1358 aa29.23■■■□□ 2.27
NPM3-201ENST00000370110 ARHGEF5Q12774 1597 aa29.22■■■□□ 2.27
NPM3-201ENST00000370110 NEURL4Q96JN8 1562 aa29.22■■■□□ 2.27
NPM3-201ENST00000370110 FAM135AQ9P2D6 1515 aa29.2■■■□□ 2.27
NPM3-201ENST00000370110 UBAP1LF5GYI3 381 aa29.19■■■□□ 2.26
NPM3-201ENST00000370110 PPARGC1BQ86YN6 1023 aaKnown RBP29.19■■■□□ 2.26
NPM3-201ENST00000370110 POLR1AO95602 1720 aaPredicted RBP29.19■■■□□ 2.26
NPM3-201ENST00000370110 RSPH4AQ5TD94 716 aa29.17■■■□□ 2.26
NPM3-201ENST00000370110 WASHC2CQ9Y4E1 1318 aa29.16■■■□□ 2.26
NPM3-201ENST00000370110 MIA2Q96PC5 1412 aa29.11■■■□□ 2.25
NPM3-201ENST00000370110 RNF17Q9BXT8 1623 aaKnown RBP29.1■■■□□ 2.25
NPM3-201ENST00000370110 SOCS7O14512 581 aa29.1■■■□□ 2.25
NPM3-201ENST00000370110 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.1■■■□□ 2.25
NPM3-201ENST00000370110 MAST1Q9Y2H9 1570 aa29.09■■■□□ 2.25
NPM3-201ENST00000370110 TSPY4P0CV99 314 aa29.09■■■□□ 2.25
NPM3-201ENST00000370110 TSPY10P0CW01 314 aa29.09■■■□□ 2.25
NPM3-201ENST00000370110 ABCC3O15438 1527 aa29.07■■■□□ 2.24
NPM3-201ENST00000370110 NLRP1Q9C000 1473 aa29.07■■■□□ 2.24
NPM3-201ENST00000370110 UGGT1Q9NYU2 1555 aa29.05■■■□□ 2.24
NPM3-201ENST00000370110 SHANK2Q9UPX8 1470 aa29.05■■■□□ 2.24
NPM3-201ENST00000370110 MROH1Q8NDA8 1641 aa29.05■■■□□ 2.24
NPM3-201ENST00000370110 VWDEQ8N2E2 1590 aa29.04■■■□□ 2.24
NPM3-201ENST00000370110 CPS1P31327 1500 aa29.04■■■□□ 2.24
NPM3-201ENST00000370110 ANKLE2Q86XL3 938 aa29.01■■■□□ 2.23
NPM3-201ENST00000370110 ZC3H13Q5T200 1668 aaKnown RBP29.01■■■□□ 2.23
NPM3-201ENST00000370110 EIF2AK4Q9P2K8 1649 aaKnown RBP29.01■■■□□ 2.23
NPM3-201ENST00000370110 THEMISQ8N1K5 641 aaPredicted RBP29■■■□□ 2.23
NPM3-201ENST00000370110 DEPDC5O75140 1603 aa29■■■□□ 2.23
NPM3-201ENST00000370110 MYOM3Q5VTT5 1437 aa29■■■□□ 2.23
NPM3-201ENST00000370110 MED14O60244 1454 aa28.99■■■□□ 2.23
NPM3-201ENST00000370110 NPHP4O75161 1426 aaPredicted RBP28.99■■■□□ 2.23
NPM3-201ENST00000370110 ERVK-7P63135 1459 aa28.97■■■□□ 2.23
NPM3-201ENST00000370110 CEP152O94986 1710 aa28.97■■■□□ 2.23
NPM3-201ENST00000370110 IQGAP1P46940 1657 aa28.94■■■□□ 2.22
NPM3-201ENST00000370110 PIP4K2BP78356 416 aa28.94■■■□□ 2.22
NPM3-201ENST00000370110 ALKQ9UM73 1620 aa28.94■■■□□ 2.22
NPM3-201ENST00000370110 SCAF1Q9H7N4 1312 aaKnown RBP28.94■■■□□ 2.22
NPM3-201ENST00000370110 HSPA1LP34931 641 aa28.93■■■□□ 2.22
NPM3-201ENST00000370110 STRCP1A6NGW2 1772 aa28.91■■■□□ 2.22
NPM3-201ENST00000370110 CFAP65Q6ZU64 1925 aaKnown RBP28.9■■■□□ 2.22
NPM3-201ENST00000370110 DUOX2Q9NRD8 1548 aa28.89■■■□□ 2.22
NPM3-201ENST00000370110 TOM1O60784 492 aa28.88■■■□□ 2.21
NPM3-201ENST00000370110 UBR1Q8IWV7 1749 aa28.88■■■□□ 2.21
NPM3-201ENST00000370110 CROCC2H7BZ55 1655 aa28.87■■■□□ 2.21
NPM3-201ENST00000370110 FAM50AQ14320 339 aaKnown RBP28.87■■■□□ 2.21
NPM3-201ENST00000370110 FGD6Q6ZV73 1430 aa28.86■■■□□ 2.21
NPM3-201ENST00000370110 PRDM15P57071 1507 aaPredicted RBP28.85■■■□□ 2.21
NPM3-201ENST00000370110 KIF15Q9NS87 1388 aa28.85■■■□□ 2.21
NPM3-201ENST00000370110 ABCC5O15440 1437 aa28.85■■■□□ 2.21
NPM3-201ENST00000370110 MED1Q15648 1581 aaPredicted RBP28.84■■■□□ 2.21
NPM3-201ENST00000370110 LRRC7Q96NW7 1537 aa28.82■■■□□ 2.2
NPM3-201ENST00000370110 PTPN23Q9H3S7 1636 aa28.82■■■□□ 2.2
NPM3-201ENST00000370110 SCAF11Q99590 1463 aaKnown RBP28.78■■■□□ 2.2
NPM3-201ENST00000370110 ARHGAP31Q2M1Z3 1444 aa28.78■■■□□ 2.2
NPM3-201ENST00000370110 ERBINQ96RT1 1412 aa28.78■■■□□ 2.2
NPM3-201ENST00000370110 RRP7BPQ9NSQ0 103 aa28.78■■■□□ 2.2
NPM3-201ENST00000370110 ARHGAP23Q9P227 1491 aa28.78■■■□□ 2.2
NPM3-201ENST00000370110 SYNMO15061 1565 aa28.77■■■□□ 2.2
NPM3-201ENST00000370110 LTKP29376 864 aa28.76■■■□□ 2.19
NPM3-201ENST00000370110 DAPK1P53355 1430 aa28.76■■■□□ 2.19
NPM3-201ENST00000370110 SLIT1O75093 1534 aa28.75■■■□□ 2.19
NPM3-201ENST00000370110 PIK3C2BO00750 1634 aa28.72■■■□□ 2.19
NPM3-201ENST00000370110 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.72■■■□□ 2.19
NPM3-201ENST00000370110 TXNDC2Q86VQ3 553 aa28.7■■■□□ 2.18
NPM3-201ENST00000370110 ITGAEP38570 1179 aa28.68■■■□□ 2.18
NPM3-201ENST00000370110 SENP3Q9H4L4 574 aaPredicted RBP28.68■■■□□ 2.18
NPM3-201ENST00000370110 XIRP1Q702N8 1843 aaKnown RBP28.66■■■□□ 2.18
NPM3-201ENST00000370110 CHIC2Q9UKJ5 165 aa28.65■■■□□ 2.18
NPM3-201ENST00000370110 LMTK2Q8IWU2 1503 aa28.64■■■□□ 2.17
NPM3-201ENST00000370110 TMEM2Q9UHN6 1383 aa28.63■■■□□ 2.17
NPM3-201ENST00000370110 KANK1Q14678 1352 aa28.62■■■□□ 2.17
NPM3-201ENST00000370110 ANKRD30AQ9BXX3 1397 aa28.61■■■□□ 2.17
NPM3-201ENST00000370110 EFCAB6Q5THR3 1501 aa28.59■■■□□ 2.17
NPM3-201ENST00000370110 IDI1Q13907 227 aa28.59■■■□□ 2.17
NPM3-201ENST00000370110 EID1Q9Y6B2 187 aa28.59■■■□□ 2.17
NPM3-201ENST00000370110 KDM5AP29375 1690 aaKnown RBP28.58■■■□□ 2.17
NPM3-201ENST00000370110 RRBP1Q9P2E9 1410 aaKnown RBP28.57■■■□□ 2.16
NPM3-201ENST00000370110 NOS1P29475 1434 aa28.55■■■□□ 2.16
NPM3-201ENST00000370110 STAG3Q9UJ98 1225 aa28.55■■■□□ 2.16
NPM3-201ENST00000370110 ADGRL2O95490 1459 aa28.53■■■□□ 2.16
NPM3-201ENST00000370110 PHF23Q9BUL5 403 aaPredicted RBP28.53■■■□□ 2.16
NPM3-201ENST00000370110 TET3O43151 1660 aa28.52■■■□□ 2.16
NPM3-201ENST00000370110 ADGRB3O60242 1522 aa28.52■■■□□ 2.16
NPM3-201ENST00000370110 SLC26A8Q96RN1 970 aa28.49■■■□□ 2.15
NPM3-201ENST00000370110 TMEM94Q12767 1356 aa28.49■■■□□ 2.15
NPM3-201ENST00000370110 RBM33Q96EV2 1170 aaKnown RBP28.45■■■□□ 2.14
NPM3-201ENST00000370110 KCNA6P17658 529 aa28.44■■■□□ 2.14
NPM3-201ENST00000370110 ANKRD50Q9ULJ7 1429 aa28.43■■■□□ 2.14
NPM3-201ENST00000370110 NWD1Q149M9 1564 aa28.43■■■□□ 2.14
NPM3-201ENST00000370110 FAM135BQ49AJ0 1406 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms