RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 TSPY10P0CW01 314 aa25.4■■□□□ 1.66
CKS1B-202ENST00000368436 KANK4Q5T7N3 995 aaPredicted RBP25.4■■□□□ 1.66
CKS1B-202ENST00000368436 KDM5DQ9BY66 1539 aa25.4■■□□□ 1.66
CKS1B-202ENST00000368436 TCOF1Q13428 1488 aaKnown RBP25.39■■□□□ 1.65
CKS1B-202ENST00000368436 MAST1Q9Y2H9 1570 aa25.39■■□□□ 1.65
CKS1B-202ENST00000368436 PKD2Q13563 968 aa25.38■■□□□ 1.65
CKS1B-202ENST00000368436 A2ML1A8K2U0 1454 aa25.38■■□□□ 1.65
CKS1B-202ENST00000368436 IQSEC2Q5JU85 1478 aa25.38■■□□□ 1.65
CKS1B-202ENST00000368436 DNMT1P26358 1616 aaKnown RBP25.37■■□□□ 1.65
CKS1B-202ENST00000368436 PZPP20742 1482 aa25.36■■□□□ 1.65
CKS1B-202ENST00000368436 MIA2Q96PC5 1412 aa25.36■■□□□ 1.65
CKS1B-202ENST00000368436 FBXO31Q5XUX0 539 aaPredicted RBP25.34■■□□□ 1.65
CKS1B-202ENST00000368436 MYOM3Q5VTT5 1437 aa25.34■■□□□ 1.65
CKS1B-202ENST00000368436 WASHC2CQ9Y4E1 1318 aa25.34■■□□□ 1.65
CKS1B-202ENST00000368436 RNF17Q9BXT8 1623 aaKnown RBP25.32■■□□□ 1.64
CKS1B-202ENST00000368436 TNRQ92752 1358 aa25.31■■□□□ 1.64
CKS1B-202ENST00000368436 EIF2AK4Q9P2K8 1649 aaKnown RBP25.3■■□□□ 1.64
CKS1B-202ENST00000368436 ZNF335Q9H4Z2 1342 aaPredicted RBP25.28■■□□□ 1.64
CKS1B-202ENST00000368436 POLR1AO95602 1720 aaPredicted RBP25.27■■□□□ 1.64
CKS1B-202ENST00000368436 ZC3H13Q5T200 1668 aaKnown RBP25.26■■□□□ 1.63
CKS1B-202ENST00000368436 ABCC3O15438 1527 aa25.24■■□□□ 1.63
CKS1B-202ENST00000368436 MROH1Q8NDA8 1641 aa25.23■■□□□ 1.63
CKS1B-202ENST00000368436 NLRP1Q9C000 1473 aa25.23■■□□□ 1.63
CKS1B-202ENST00000368436 NEURL4Q96JN8 1562 aa25.22■■□□□ 1.63
CKS1B-202ENST00000368436 DUOX2Q9NRD8 1548 aa25.21■■□□□ 1.63
CKS1B-202ENST00000368436 CROCC2H7BZ55 1655 aa25.2■■□□□ 1.63
CKS1B-202ENST00000368436 PTPN23Q9H3S7 1636 aa25.19■■□□□ 1.62
CKS1B-202ENST00000368436 SPATA31D1Q6ZQQ2 1576 aa25.19■■□□□ 1.62
CKS1B-202ENST00000368436 THEMISQ8N1K5 641 aaPredicted RBP25.19■■□□□ 1.62
CKS1B-202ENST00000368436 UGGT1Q9NYU2 1555 aa25.18■■□□□ 1.62
CKS1B-202ENST00000368436 APLP2Q06481 763 aa25.18■■□□□ 1.62
CKS1B-202ENST00000368436 SHANK2Q9UPX8 1470 aa25.17■■□□□ 1.62
CKS1B-202ENST00000368436 ABCC5O15440 1437 aa25.17■■□□□ 1.62
CKS1B-202ENST00000368436 CEP152O94986 1710 aa25.17■■□□□ 1.62
CKS1B-202ENST00000368436 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.16■■□□□ 1.62
CKS1B-202ENST00000368436 ANKLE2Q86XL3 938 aa25.15■■□□□ 1.62
CKS1B-202ENST00000368436 DEPDC5O75140 1603 aa25.15■■□□□ 1.62
CKS1B-202ENST00000368436 ERVK-7P63135 1459 aa25.14■■□□□ 1.61
CKS1B-202ENST00000368436 KIF15Q9NS87 1388 aa25.13■■□□□ 1.61
CKS1B-202ENST00000368436 CFAP65Q6ZU64 1925 aaKnown RBP25.12■■□□□ 1.61
CKS1B-202ENST00000368436 MED14O60244 1454 aa25.12■■□□□ 1.61
CKS1B-202ENST00000368436 PRDM15P57071 1507 aaPredicted RBP25.11■■□□□ 1.61
CKS1B-202ENST00000368436 DAPK1P53355 1430 aa25.11■■□□□ 1.61
CKS1B-202ENST00000368436 FGD6Q6ZV73 1430 aa25.11■■□□□ 1.61
CKS1B-202ENST00000368436 ERBINQ96RT1 1412 aa25.11■■□□□ 1.61
CKS1B-202ENST00000368436 UBAP1LF5GYI3 381 aa25.1■■□□□ 1.61
CKS1B-202ENST00000368436 CPS1P31327 1500 aa25.1■■□□□ 1.61
CKS1B-202ENST00000368436 RRP7BPQ9NSQ0 103 aa25.08■■□□□ 1.61
CKS1B-202ENST00000368436 NPHP4O75161 1426 aaPredicted RBP25.08■■□□□ 1.61
CKS1B-202ENST00000368436 VWDEQ8N2E2 1590 aa25.07■■□□□ 1.6
CKS1B-202ENST00000368436 ARHGAP31Q2M1Z3 1444 aa25.07■■□□□ 1.6
CKS1B-202ENST00000368436 DISP3Q9P2K9 1392 aa25.06■■□□□ 1.6
CKS1B-202ENST00000368436 UBR1Q8IWV7 1749 aa25.06■■□□□ 1.6
CKS1B-202ENST00000368436 IQGAP1P46940 1657 aa25.05■■□□□ 1.6
CKS1B-202ENST00000368436 ANKRD30AQ9BXX3 1397 aa25■■□□□ 1.59
CKS1B-202ENST00000368436 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.97■■□□□ 1.59
CKS1B-202ENST00000368436 CHIC2Q9UKJ5 165 aa24.97■■□□□ 1.59
CKS1B-202ENST00000368436 STRCP1A6NGW2 1772 aa24.97■■□□□ 1.59
CKS1B-202ENST00000368436 LMTK2Q8IWU2 1503 aa24.96■■□□□ 1.59
CKS1B-202ENST00000368436 ARHGAP23Q9P227 1491 aa24.96■■□□□ 1.59
CKS1B-202ENST00000368436 KANK1Q14678 1352 aa24.96■■□□□ 1.59
CKS1B-202ENST00000368436 SLIT1O75093 1534 aa24.96■■□□□ 1.59
CKS1B-202ENST00000368436 ILDR2Q71H61 639 aa24.95■■□□□ 1.58
CKS1B-202ENST00000368436 ADGRL2O95490 1459 aa24.95■■□□□ 1.58
CKS1B-202ENST00000368436 TOM1O60784 492 aa24.94■■□□□ 1.58
CKS1B-202ENST00000368436 SCAF11Q99590 1463 aaKnown RBP24.94■■□□□ 1.58
CKS1B-202ENST00000368436 PIK3C2BO00750 1634 aa24.93■■□□□ 1.58
CKS1B-202ENST00000368436 KDM5AP29375 1690 aaKnown RBP24.91■■□□□ 1.58
CKS1B-202ENST00000368436 LTKP29376 864 aa24.9■■□□□ 1.58
CKS1B-202ENST00000368436 TXNDC2Q86VQ3 553 aa24.89■■□□□ 1.58
CKS1B-202ENST00000368436 ALKQ9UM73 1620 aa24.89■■□□□ 1.57
CKS1B-202ENST00000368436 SYNMO15061 1565 aa24.88■■□□□ 1.57
CKS1B-202ENST00000368436 LRRC7Q96NW7 1537 aa24.88■■□□□ 1.57
CKS1B-202ENST00000368436 PIP4K2BP78356 416 aa24.87■■□□□ 1.57
CKS1B-202ENST00000368436 EFCAB6Q5THR3 1501 aa24.86■■□□□ 1.57
CKS1B-202ENST00000368436 FAM50AQ14320 339 aaKnown RBP24.86■■□□□ 1.57
CKS1B-202ENST00000368436 SCAF1Q9H7N4 1312 aaKnown RBP24.86■■□□□ 1.57
CKS1B-202ENST00000368436 TMEM2Q9UHN6 1383 aa24.85■■□□□ 1.57
CKS1B-202ENST00000368436 HSPA1LP34931 641 aa24.85■■□□□ 1.57
CKS1B-202ENST00000368436 IDI1Q13907 227 aa24.84■■□□□ 1.57
CKS1B-202ENST00000368436 EID1Q9Y6B2 187 aa24.84■■□□□ 1.57
CKS1B-202ENST00000368436 NOS1P29475 1434 aa24.84■■□□□ 1.57
CKS1B-202ENST00000368436 ANKRD50Q9ULJ7 1429 aa24.82■■□□□ 1.56
CKS1B-202ENST00000368436 SOCS7O14512 581 aa24.81■■□□□ 1.56
CKS1B-202ENST00000368436 STAG3Q9UJ98 1225 aa24.8■■□□□ 1.56
CKS1B-202ENST00000368436 XIRP1Q702N8 1843 aaKnown RBP24.79■■□□□ 1.56
CKS1B-202ENST00000368436 RPRD2Q5VT52 1461 aaKnown RBP24.78■■□□□ 1.56
CKS1B-202ENST00000368436 ADGRB3O60242 1522 aa24.76■■□□□ 1.55
CKS1B-202ENST00000368436 TET3O43151 1660 aa24.76■■□□□ 1.55
CKS1B-202ENST00000368436 SLC52A1Q9NWF4 448 aa24.76■■□□□ 1.55
CKS1B-202ENST00000368436 UNC13BO14795 1591 aa24.74■■□□□ 1.55
CKS1B-202ENST00000368436 GCC2Q8IWJ2 1684 aa24.73■■□□□ 1.55
CKS1B-202ENST00000368436 MED1Q15648 1581 aaPredicted RBP24.72■■□□□ 1.55
CKS1B-202ENST00000368436 ROCK1Q13464 1354 aa24.7■■□□□ 1.55
CKS1B-202ENST00000368436 MYO5BQ9ULV0 1848 aa24.7■■□□□ 1.54
CKS1B-202ENST00000368436 KCNA6P17658 529 aa24.67■■□□□ 1.54
CKS1B-202ENST00000368436 TMEM131LA2VDJ0 1609 aa24.66■■□□□ 1.54
CKS1B-202ENST00000368436 SLC26A8Q96RN1 970 aa24.66■■□□□ 1.54
CKS1B-202ENST00000368436 E9PCH4 1651 aa24.66■■□□□ 1.54
CKS1B-202ENST00000368436 ZFYVE9O95405 1425 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms