RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 ZNF644Q9H582 1327 aaPredicted RBP19.75■□□□□ 0.75
MRPL55-209ENST00000366735 ZC3H13Q5T200 1668 aaKnown RBP19.75■□□□□ 0.75
MRPL55-209ENST00000366735 TCOF1Q13428 1488 aaKnown RBP19.74■□□□□ 0.75
MRPL55-209ENST00000366735 DNMT1P26358 1616 aaKnown RBP19.74■□□□□ 0.75
MRPL55-209ENST00000366735 A2ML1A8K2U0 1454 aa19.73■□□□□ 0.75
MRPL55-209ENST00000366735 EIF2AK4Q9P2K8 1649 aaKnown RBP19.71■□□□□ 0.75
MRPL55-209ENST00000366735 SPATA31D1Q6ZQQ2 1576 aa19.7■□□□□ 0.74
MRPL55-209ENST00000366735 VPS8Q8N3P4 1428 aa19.7■□□□□ 0.74
MRPL55-209ENST00000366735 PZPP20742 1482 aa19.7■□□□□ 0.74
MRPL55-209ENST00000366735 MAST1Q9Y2H9 1570 aa19.7■□□□□ 0.74
MRPL55-209ENST00000366735 RNF17Q9BXT8 1623 aaKnown RBP19.69■□□□□ 0.74
MRPL55-209ENST00000366735 LRRC9Q6ZRR7 1453 aa19.68■□□□□ 0.74
MRPL55-209ENST00000366735 NCKAP5LQ9HCH0 1330 aa19.68■□□□□ 0.74
MRPL55-209ENST00000366735 KIF3BO15066 747 aa19.67■□□□□ 0.74
MRPL55-209ENST00000366735 TSPY4P0CV99 314 aa19.66■□□□□ 0.74
MRPL55-209ENST00000366735 TSPY10P0CW01 314 aa19.66■□□□□ 0.74
MRPL55-209ENST00000366735 TNRQ92752 1358 aa19.66■□□□□ 0.74
MRPL55-209ENST00000366735 DISP3Q9P2K9 1392 aa19.66■□□□□ 0.74
MRPL55-209ENST00000366735 MAP3K1Q13233 1512 aa19.66■□□□□ 0.74
MRPL55-209ENST00000366735 NLRP1Q9C000 1473 aa19.63■□□□□ 0.73
MRPL55-209ENST00000366735 ZNF335Q9H4Z2 1342 aaPredicted RBP19.63■□□□□ 0.73
MRPL55-209ENST00000366735 WASHC2CQ9Y4E1 1318 aa19.63■□□□□ 0.73
MRPL55-209ENST00000366735 NEURL4Q96JN8 1562 aa19.62■□□□□ 0.73
MRPL55-209ENST00000366735 CROCC2H7BZ55 1655 aa19.62■□□□□ 0.73
MRPL55-209ENST00000366735 DEPDC5O75140 1603 aa19.62■□□□□ 0.73
MRPL55-209ENST00000366735 CEP152O94986 1710 aa19.61■□□□□ 0.73
MRPL55-209ENST00000366735 UGGT1Q9NYU2 1555 aa19.61■□□□□ 0.73
MRPL55-209ENST00000366735 CPS1P31327 1500 aa19.61■□□□□ 0.73
MRPL55-209ENST00000366735 MIA2Q96PC5 1412 aa19.59■□□□□ 0.73
MRPL55-209ENST00000366735 ABCC3O15438 1527 aa19.58■□□□□ 0.73
MRPL55-209ENST00000366735 IQGAP1P46940 1657 aa19.58■□□□□ 0.72
MRPL55-209ENST00000366735 MYOM3Q5VTT5 1437 aa19.58■□□□□ 0.72
MRPL55-209ENST00000366735 CFAP65Q6ZU64 1925 aaKnown RBP19.57■□□□□ 0.72
MRPL55-209ENST00000366735 UBAP1LF5GYI3 381 aa19.56■□□□□ 0.72
MRPL55-209ENST00000366735 DUOX2Q9NRD8 1548 aa19.56■□□□□ 0.72
MRPL55-209ENST00000366735 THEMISQ8N1K5 641 aaPredicted RBP19.54■□□□□ 0.72
MRPL55-209ENST00000366735 MROH1Q8NDA8 1641 aa19.54■□□□□ 0.72
MRPL55-209ENST00000366735 FBXO31Q5XUX0 539 aaPredicted RBP19.53■□□□□ 0.72
MRPL55-209ENST00000366735 SHANK2Q9UPX8 1470 aa19.53■□□□□ 0.72
MRPL55-209ENST00000366735 PTPN23Q9H3S7 1636 aa19.52■□□□□ 0.72
MRPL55-209ENST00000366735 UBR1Q8IWV7 1749 aa19.52■□□□□ 0.72
MRPL55-209ENST00000366735 ANKLE2Q86XL3 938 aa19.52■□□□□ 0.72
MRPL55-209ENST00000366735 MED14O60244 1454 aa19.52■□□□□ 0.72
MRPL55-209ENST00000366735 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.51■□□□□ 0.71
MRPL55-209ENST00000366735 ERVK-7P63135 1459 aa19.51■□□□□ 0.71
MRPL55-209ENST00000366735 SYNMO15061 1565 aa19.51■□□□□ 0.71
MRPL55-209ENST00000366735 PRDM15P57071 1507 aaPredicted RBP19.51■□□□□ 0.71
MRPL55-209ENST00000366735 NPHP4O75161 1426 aaPredicted RBP19.5■□□□□ 0.71
MRPL55-209ENST00000366735 VWDEQ8N2E2 1590 aa19.49■□□□□ 0.71
MRPL55-209ENST00000366735 APLP2Q06481 763 aa19.48■□□□□ 0.71
MRPL55-209ENST00000366735 ERBINQ96RT1 1412 aa19.48■□□□□ 0.71
MRPL55-209ENST00000366735 FOXD1Q16676 465 aa19.47■□□□□ 0.71
MRPL55-209ENST00000366735 SLC4A1APQ9BWU0 796 aaKnown RBP19.46■□□□□ 0.71
MRPL55-209ENST00000366735 TOM1O60784 492 aa19.45■□□□□ 0.7
MRPL55-209ENST00000366735 KIF15Q9NS87 1388 aa19.44■□□□□ 0.7
MRPL55-209ENST00000366735 LOC105371045A0A1W2PR82 267 aa19.44■□□□□ 0.7
MRPL55-209ENST00000366735 SOCS7O14512 581 aa19.44■□□□□ 0.7
MRPL55-209ENST00000366735 KANK4Q5T7N3 995 aaPredicted RBP19.44■□□□□ 0.7
MRPL55-209ENST00000366735 SCAF1Q9H7N4 1312 aaKnown RBP19.44■□□□□ 0.7
MRPL55-209ENST00000366735 KDM5AP29375 1690 aaKnown RBP19.43■□□□□ 0.7
MRPL55-209ENST00000366735 STRCP1A6NGW2 1772 aa19.42■□□□□ 0.7
MRPL55-209ENST00000366735 ILDR2Q71H61 639 aa19.42■□□□□ 0.7
MRPL55-209ENST00000366735 ARHGAP31Q2M1Z3 1444 aa19.41■□□□□ 0.7
MRPL55-209ENST00000366735 KANK1Q14678 1352 aa19.4■□□□□ 0.7
MRPL55-209ENST00000366735 DAPK1P53355 1430 aa19.4■□□□□ 0.7
MRPL55-209ENST00000366735 SCAF11Q99590 1463 aaKnown RBP19.4■□□□□ 0.7
MRPL55-209ENST00000366735 PIK3C2BO00750 1634 aa19.39■□□□□ 0.69
MRPL55-209ENST00000366735 ABCC5O15440 1437 aa19.38■□□□□ 0.69
MRPL55-209ENST00000366735 SLIT1O75093 1534 aa19.38■□□□□ 0.69
MRPL55-209ENST00000366735 FGD6Q6ZV73 1430 aa19.38■□□□□ 0.69
MRPL55-209ENST00000366735 MED1Q15648 1581 aaPredicted RBP19.37■□□□□ 0.69
MRPL55-209ENST00000366735 PIP4K2BP78356 416 aa19.37■□□□□ 0.69
MRPL55-209ENST00000366735 ANKRD30AQ9BXX3 1397 aa19.35■□□□□ 0.69
MRPL55-209ENST00000366735 ARHGAP23Q9P227 1491 aa19.35■□□□□ 0.69
MRPL55-209ENST00000366735 LMTK2Q8IWU2 1503 aa19.34■□□□□ 0.69
MRPL55-209ENST00000366735 RRP7BPQ9NSQ0 103 aa19.33■□□□□ 0.68
MRPL55-209ENST00000366735 LRRC7Q96NW7 1537 aa19.33■□□□□ 0.68
MRPL55-209ENST00000366735 XIRP1Q702N8 1843 aaKnown RBP19.32■□□□□ 0.68
MRPL55-209ENST00000366735 EFCAB6Q5THR3 1501 aa19.31■□□□□ 0.68
MRPL55-209ENST00000366735 HSPA1LP34931 641 aa19.31■□□□□ 0.68
MRPL55-209ENST00000366735 EID1Q9Y6B2 187 aa19.31■□□□□ 0.68
MRPL55-209ENST00000366735 ALKQ9UM73 1620 aa19.31■□□□□ 0.68
MRPL55-209ENST00000366735 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.29■□□□□ 0.68
MRPL55-209ENST00000366735 ADGRL2O95490 1459 aa19.28■□□□□ 0.68
MRPL55-209ENST00000366735 STAG3Q9UJ98 1225 aa19.28■□□□□ 0.68
MRPL55-209ENST00000366735 GCC2Q8IWJ2 1684 aa19.27■□□□□ 0.68
MRPL55-209ENST00000366735 ADGRB3O60242 1522 aa19.27■□□□□ 0.68
MRPL55-209ENST00000366735 TXNDC2Q86VQ3 553 aa19.27■□□□□ 0.68
MRPL55-209ENST00000366735 TET3O43151 1660 aa19.25■□□□□ 0.67
MRPL55-209ENST00000366735 TMEM2Q9UHN6 1383 aa19.25■□□□□ 0.67
MRPL55-209ENST00000366735 MYO5BQ9ULV0 1848 aa19.25■□□□□ 0.67
MRPL55-209ENST00000366735 RPRD2Q5VT52 1461 aaKnown RBP19.24■□□□□ 0.67
MRPL55-209ENST00000366735 CHIC2Q9UKJ5 165 aa19.22■□□□□ 0.67
MRPL55-209ENST00000366735 LTKP29376 864 aa19.21■□□□□ 0.67
MRPL55-209ENST00000366735 NOS1P29475 1434 aa19.2■□□□□ 0.66
MRPL55-209ENST00000366735 UNC13BO14795 1591 aa19.19■□□□□ 0.66
MRPL55-209ENST00000366735 NWD1Q149M9 1564 aa19.19■□□□□ 0.66
MRPL55-209ENST00000366735 ANKRD50Q9ULJ7 1429 aa19.18■□□□□ 0.66
MRPL55-209ENST00000366735 NKTRP30414 1462 aaKnown RBP19.17■□□□□ 0.66
MRPL55-209ENST00000366735 FAM50AQ14320 339 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms