RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 ZC3H13Q5T200 1668 aaKnown RBP16.18■□□□□ 0.18
YBX3-203ENST00000366286 ABCC5O15440 1437 aa16.17■□□□□ 0.18
YBX3-203ENST00000366286 NPATQ14207 1427 aa16.17■□□□□ 0.18
YBX3-203ENST00000366286 CEP152O94986 1710 aa16.16■□□□□ 0.18
YBX3-203ENST00000366286 MROH1Q8NDA8 1641 aa16.16■□□□□ 0.18
YBX3-203ENST00000366286 ZMYM3Q14202 1370 aa16.16■□□□□ 0.18
YBX3-203ENST00000366286 DUOX2Q9NRD8 1548 aa16.16■□□□□ 0.18
YBX3-203ENST00000366286 KIF3BO15066 747 aa16.15■□□□□ 0.18
YBX3-203ENST00000366286 PTPRKQ15262 1439 aa16.13■□□□□ 0.17
YBX3-203ENST00000366286 PPP6R1Q9UPN7 881 aa16.12■□□□□ 0.17
YBX3-203ENST00000366286 DEPDC5O75140 1603 aa16.12■□□□□ 0.17
YBX3-203ENST00000366286 ABCC3O15438 1527 aa16.11■□□□□ 0.17
YBX3-203ENST00000366286 CEP170BQ9Y4F5 1589 aaPredicted RBP16.11■□□□□ 0.17
YBX3-203ENST00000366286 CAMSAP1Q5T5Y3 1602 aa16.11■□□□□ 0.17
YBX3-203ENST00000366286 KIF15Q9NS87 1388 aa16.11■□□□□ 0.17
YBX3-203ENST00000366286 PRDM15P57071 1507 aaPredicted RBP16.1■□□□□ 0.17
YBX3-203ENST00000366286 PZPP20742 1482 aa16.1■□□□□ 0.17
YBX3-203ENST00000366286 ERBINQ96RT1 1412 aa16.09■□□□□ 0.17
YBX3-203ENST00000366286 ADGRL2O95490 1459 aa16.08■□□□□ 0.16
YBX3-203ENST00000366286 CFAP65Q6ZU64 1925 aaKnown RBP16.06■□□□□ 0.16
YBX3-203ENST00000366286 WASHC2CQ9Y4E1 1318 aa16.05■□□□□ 0.16
YBX3-203ENST00000366286 NCOA1Q15788 1441 aa16.04■□□□□ 0.16
YBX3-203ENST00000366286 ANKRD30AQ9BXX3 1397 aa16.04■□□□□ 0.16
YBX3-203ENST00000366286 FAM50AQ14320 339 aaKnown RBP16.04■□□□□ 0.16
YBX3-203ENST00000366286 RRP7BPQ9NSQ0 103 aa16.04■□□□□ 0.16
YBX3-203ENST00000366286 POLR1AO95602 1720 aaPredicted RBP16.03■□□□□ 0.16
YBX3-203ENST00000366286 CHIC2Q9UKJ5 165 aa16.03■□□□□ 0.16
YBX3-203ENST00000366286 SPATA31D1Q6ZQQ2 1576 aa16.03■□□□□ 0.16
YBX3-203ENST00000366286 A2ML1A8K2U0 1454 aa16.03■□□□□ 0.16
YBX3-203ENST00000366286 TNRQ92752 1358 aa16.02■□□□□ 0.16
YBX3-203ENST00000366286 PPARGC1BQ86YN6 1023 aaKnown RBP16.01■□□□□ 0.15
YBX3-203ENST00000366286 PLA2R1Q13018 1463 aa16.01■□□□□ 0.15
YBX3-203ENST00000366286 VWDEQ8N2E2 1590 aa16■□□□□ 0.15
YBX3-203ENST00000366286 ERVK-7P63135 1459 aa16■□□□□ 0.15
YBX3-203ENST00000366286 FBXO31Q5XUX0 539 aaPredicted RBP16■□□□□ 0.15
YBX3-203ENST00000366286 PTPRTO14522 1441 aa15.98■□□□□ 0.15
YBX3-203ENST00000366286 NLRP1Q9C000 1473 aa15.97■□□□□ 0.15
YBX3-203ENST00000366286 LMTK2Q8IWU2 1503 aa15.97■□□□□ 0.15
YBX3-203ENST00000366286 UNC13BO14795 1591 aa15.96■□□□□ 0.15
YBX3-203ENST00000366286 UBR1Q8IWV7 1749 aa15.96■□□□□ 0.15
YBX3-203ENST00000366286 UGGT1Q9NYU2 1555 aa15.96■□□□□ 0.14
YBX3-203ENST00000366286 ANKRD50Q9ULJ7 1429 aa15.95■□□□□ 0.14
YBX3-203ENST00000366286 EFCAB6Q5THR3 1501 aa15.95■□□□□ 0.14
YBX3-203ENST00000366286 ILDR1Q86SU0 546 aaPredicted RBP15.95■□□□□ 0.14
YBX3-203ENST00000366286 DMRT2Q9Y5R5 561 aa15.95■□□□□ 0.14
YBX3-203ENST00000366286 NEURL4Q96JN8 1562 aa15.95■□□□□ 0.14
YBX3-203ENST00000366286 ARHGAP31Q2M1Z3 1444 aa15.94■□□□□ 0.14
YBX3-203ENST00000366286 KANK1Q14678 1352 aa15.94■□□□□ 0.14
YBX3-203ENST00000366286 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.94■□□□□ 0.14
YBX3-203ENST00000366286 GCC2Q8IWJ2 1684 aa15.94■□□□□ 0.14
YBX3-203ENST00000366286 TET3O43151 1660 aa15.93■□□□□ 0.14
YBX3-203ENST00000366286 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.93■□□□□ 0.141e-8■□□□□ 9.1
YBX3-203ENST00000366286 ROCK1Q13464 1354 aa15.92■□□□□ 0.14
YBX3-203ENST00000366286 RRBP1Q9P2E9 1410 aaKnown RBP15.92■□□□□ 0.14
YBX3-203ENST00000366286 NCKAP5LQ9HCH0 1330 aa15.92■□□□□ 0.14
YBX3-203ENST00000366286 PIK3C2BO00750 1634 aa15.91■□□□□ 0.14
YBX3-203ENST00000366286 SYNMO15061 1565 aa15.9■□□□□ 0.14
YBX3-203ENST00000366286 IQGAP3Q86VI3 1631 aa15.9■□□□□ 0.14
YBX3-203ENST00000366286 LTBP4Q8N2S1 1624 aa15.9■□□□□ 0.14
YBX3-203ENST00000366286 PKD2Q13563 968 aa15.89■□□□□ 0.13
YBX3-203ENST00000366286 KDM5AP29375 1690 aaKnown RBP15.89■□□□□ 0.13
YBX3-203ENST00000366286 IQGAP1P46940 1657 aa15.88■□□□□ 0.13
YBX3-203ENST00000366286 E9PCH4 1651 aa15.87■□□□□ 0.13
YBX3-203ENST00000366286 ITGAEP38570 1179 aa15.87■□□□□ 0.13
YBX3-203ENST00000366286 CERKQ8TCT0 537 aa15.86■□□□□ 0.13
YBX3-203ENST00000366286 FBXO41Q8TF61 875 aa15.86■□□□□ 0.13
YBX3-203ENST00000366286 MYO5BQ9ULV0 1848 aa15.86■□□□□ 0.13
YBX3-203ENST00000366286 RPRD2Q5VT52 1461 aaKnown RBP15.84■□□□□ 0.13
YBX3-203ENST00000366286 NOS1P29475 1434 aa15.84■□□□□ 0.13
YBX3-203ENST00000366286 THEMISQ8N1K5 641 aaPredicted RBP15.83■□□□□ 0.12
YBX3-203ENST00000366286 MED14O60244 1454 aa15.83■□□□□ 0.12
YBX3-203ENST00000366286 ADGRB3O60242 1522 aa15.83■□□□□ 0.12
YBX3-203ENST00000366286 SLIT1O75093 1534 aa15.83■□□□□ 0.12
YBX3-203ENST00000366286 NPHP4O75161 1426 aaPredicted RBP15.81■□□□□ 0.12
YBX3-203ENST00000366286 ZNF335Q9H4Z2 1342 aaPredicted RBP15.81■□□□□ 0.12
YBX3-203ENST00000366286 ARHGAP23Q9P227 1491 aa15.81■□□□□ 0.12
YBX3-203ENST00000366286 IQSEC2Q5JU85 1478 aa15.8■□□□□ 0.12
YBX3-203ENST00000366286 ANKLE2Q86XL3 938 aa15.79■□□□□ 0.12
YBX3-203ENST00000366286 STRCP1A6NGW2 1772 aa15.79■□□□□ 0.12
YBX3-203ENST00000366286 SPHKAPQ2M3C7 1700 aa15.79■□□□□ 0.12
YBX3-203ENST00000366286 SCAF11Q99590 1463 aaKnown RBP15.78■□□□□ 0.12
YBX3-203ENST00000366286 NAIPQ13075 1403 aa15.77■□□□□ 0.11
YBX3-203ENST00000366286 TMEM131LA2VDJ0 1609 aa15.76■□□□□ 0.11
YBX3-203ENST00000366286 CPS1P31327 1500 aa15.75■□□□□ 0.11
YBX3-203ENST00000366286 NUP155O75694 1391 aa15.75■□□□□ 0.11
YBX3-203ENST00000366286 IDI1Q13907 227 aa15.74■□□□□ 0.11
YBX3-203ENST00000366286 TMEM2Q9UHN6 1383 aa15.74■□□□□ 0.11
YBX3-203ENST00000366286 HFM1A2PYH4 1435 aa15.73■□□□□ 0.11
YBX3-203ENST00000366286 STAG3Q9UJ98 1225 aa15.72■□□□□ 0.11
YBX3-203ENST00000366286 LTKP29376 864 aa15.71■□□□□ 0.11
YBX3-203ENST00000366286 SLC52A1Q9NWF4 448 aa15.71■□□□□ 0.11
YBX3-203ENST00000366286 TXNDC2Q86VQ3 553 aa15.69■□□□□ 0.1
YBX3-203ENST00000366286 XIRP1Q702N8 1843 aaKnown RBP15.68■□□□□ 0.1
YBX3-203ENST00000366286 EID1Q9Y6B2 187 aa15.68■□□□□ 0.1
YBX3-203ENST00000366286 CLTCL1P53675 1640 aa15.68■□□□□ 0.1
YBX3-203ENST00000366286 ZFYVE9O95405 1425 aa15.68■□□□□ 0.1
YBX3-203ENST00000366286 TRPM2O94759 1503 aa15.67■□□□□ 0.1
YBX3-203ENST00000366286 KIF1BO60333 1816 aa15.66■□□□□ 0.1
YBX3-203ENST00000366286 RIMS2Q9UQ26 1411 aa15.65■□□□□ 0.1
YBX3-203ENST00000366286 LRRC7Q96NW7 1537 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms