RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 RSPH4AQ5TD94 716 aa33.75■■■□□ 2.99
CD47-202ENST00000361309 SPATA31D1Q6ZQQ2 1576 aa33.75■■■□□ 2.99
CD47-202ENST00000361309 KDM5DQ9BY66 1539 aa33.74■■■□□ 2.99
CD47-202ENST00000361309 FBXO31Q5XUX0 539 aaPredicted RBP33.73■■■□□ 2.99
CD47-202ENST00000361309 POLR1AO95602 1720 aaPredicted RBP33.73■■■□□ 2.99
CD47-202ENST00000361309 FAM135AQ9P2D6 1515 aa33.71■■■□□ 2.99
CD47-202ENST00000361309 ARHGEF5Q12774 1597 aa33.71■■■□□ 2.99
CD47-202ENST00000361309 TNRQ92752 1358 aa33.71■■■□□ 2.99
CD47-202ENST00000361309 PZPP20742 1482 aa33.7■■■□□ 2.99
CD47-202ENST00000361309 UBAP1LF5GYI3 381 aa33.69■■■□□ 2.98
CD47-202ENST00000361309 WASHC2CQ9Y4E1 1318 aa33.68■■■□□ 2.98
CD47-202ENST00000361309 TSPY4P0CV99 314 aa33.64■■■□□ 2.98
CD47-202ENST00000361309 TSPY10P0CW01 314 aa33.64■■■□□ 2.98
CD47-202ENST00000361309 NEURL4Q96JN8 1562 aa33.64■■■□□ 2.98
CD47-202ENST00000361309 LRRC9Q6ZRR7 1453 aa33.62■■■□□ 2.97
CD47-202ENST00000361309 VPS8Q8N3P4 1428 aa33.6■■■□□ 2.97
CD47-202ENST00000361309 SOCS7O14512 581 aa33.58■■■□□ 2.97
CD47-202ENST00000361309 MIA2Q96PC5 1412 aa33.57■■■□□ 2.96
CD47-202ENST00000361309 RNF17Q9BXT8 1623 aaKnown RBP33.56■■■□□ 2.96
CD47-202ENST00000361309 MAST1Q9Y2H9 1570 aa33.55■■■□□ 2.96
CD47-202ENST00000361309 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.55■■■□□ 2.96
CD47-202ENST00000361309 NLRP1Q9C000 1473 aa33.55■■■□□ 2.96
CD47-202ENST00000361309 UGGT1Q9NYU2 1555 aa33.53■■■□□ 2.96
CD47-202ENST00000361309 LOC105371045A0A1W2PR82 267 aa33.53■■■□□ 2.96
CD47-202ENST00000361309 ANKLE2Q86XL3 938 aa33.53■■■□□ 2.96
CD47-202ENST00000361309 THEMISQ8N1K5 641 aaPredicted RBP33.52■■■□□ 2.96
CD47-202ENST00000361309 CPS1P31327 1500 aa33.51■■■□□ 2.95
CD47-202ENST00000361309 ZC3H13Q5T200 1668 aaKnown RBP33.51■■■□□ 2.95
CD47-202ENST00000361309 SHANK2Q9UPX8 1470 aa33.5■■■□□ 2.95
CD47-202ENST00000361309 CFAP65Q6ZU64 1925 aaKnown RBP33.5■■■□□ 2.95
CD47-202ENST00000361309 ABCC3O15438 1527 aa33.49■■■□□ 2.95
CD47-202ENST00000361309 KANK4Q5T7N3 995 aaPredicted RBP33.49■■■□□ 2.95
CD47-202ENST00000361309 EIF2AK4Q9P2K8 1649 aaKnown RBP33.49■■■□□ 2.95
CD47-202ENST00000361309 DEPDC5O75140 1603 aa33.48■■■□□ 2.95
CD47-202ENST00000361309 VWDEQ8N2E2 1590 aa33.46■■■□□ 2.95
CD47-202ENST00000361309 MAP3K1Q13233 1512 aa33.45■■■□□ 2.95
CD47-202ENST00000361309 CEP152O94986 1710 aa33.45■■■□□ 2.94
CD47-202ENST00000361309 NPHP4O75161 1426 aaPredicted RBP33.44■■■□□ 2.94
CD47-202ENST00000361309 MED14O60244 1454 aa33.44■■■□□ 2.94
CD47-202ENST00000361309 MROH1Q8NDA8 1641 aa33.43■■■□□ 2.94
CD47-202ENST00000361309 SCAF1Q9H7N4 1312 aaKnown RBP33.43■■■□□ 2.94
CD47-202ENST00000361309 MYOM3Q5VTT5 1437 aa33.43■■■□□ 2.94
CD47-202ENST00000361309 IQGAP1P46940 1657 aa33.42■■■□□ 2.94
CD47-202ENST00000361309 PIP4K2BP78356 416 aa33.41■■■□□ 2.94
CD47-202ENST00000361309 TOM1O60784 492 aa33.4■■■□□ 2.94
CD47-202ENST00000361309 ERVK-7P63135 1459 aa33.39■■■□□ 2.94
CD47-202ENST00000361309 DUOX2Q9NRD8 1548 aa33.36■■■□□ 2.93
CD47-202ENST00000361309 HSPA1LP34931 641 aa33.35■■■□□ 2.93
CD47-202ENST00000361309 STRCP1A6NGW2 1772 aa33.34■■■□□ 2.93
CD47-202ENST00000361309 UBR1Q8IWV7 1749 aa33.33■■■□□ 2.93
CD47-202ENST00000361309 CROCC2H7BZ55 1655 aa33.32■■■□□ 2.92
CD47-202ENST00000361309 ALKQ9UM73 1620 aa33.28■■■□□ 2.92
CD47-202ENST00000361309 KIF15Q9NS87 1388 aa33.26■■■□□ 2.92
CD47-202ENST00000361309 PTPN23Q9H3S7 1636 aa33.26■■■□□ 2.91
CD47-202ENST00000361309 PRDM15P57071 1507 aaPredicted RBP33.24■■■□□ 2.91
CD47-202ENST00000361309 ABCC5O15440 1437 aa33.24■■■□□ 2.91
CD47-202ENST00000361309 MED1Q15648 1581 aaPredicted RBP33.24■■■□□ 2.91
CD47-202ENST00000361309 RRP7BPQ9NSQ0 103 aa33.22■■■□□ 2.91
CD47-202ENST00000361309 LRRC7Q96NW7 1537 aa33.22■■■□□ 2.91
CD47-202ENST00000361309 ERBINQ96RT1 1412 aa33.21■■■□□ 2.91
CD47-202ENST00000361309 SYNMO15061 1565 aa33.21■■■□□ 2.91
CD47-202ENST00000361309 ARHGAP31Q2M1Z3 1444 aa33.19■■■□□ 2.9
CD47-202ENST00000361309 SCAF11Q99590 1463 aaKnown RBP33.19■■■□□ 2.9
CD47-202ENST00000361309 APLP2Q06481 763 aa33.16■■■□□ 2.9
CD47-202ENST00000361309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.16■■■□□ 2.9
CD47-202ENST00000361309 DAPK1P53355 1430 aa33.16■■■□□ 2.9
CD47-202ENST00000361309 ARHGAP23Q9P227 1491 aa33.16■■■□□ 2.9
CD47-202ENST00000361309 SLIT1O75093 1534 aa33.16■■■□□ 2.9
CD47-202ENST00000361309 LTKP29376 864 aa33.15■■■□□ 2.9
CD47-202ENST00000361309 PIK3C2BO00750 1634 aa33.13■■■□□ 2.89
CD47-202ENST00000361309 TXNDC2Q86VQ3 553 aa33.13■■■□□ 2.89
CD47-202ENST00000361309 FGD6Q6ZV73 1430 aa33.11■■■□□ 2.89
CD47-202ENST00000361309 XIRP1Q702N8 1843 aaKnown RBP33.09■■■□□ 2.89
CD47-202ENST00000361309 KANK1Q14678 1352 aa33.09■■■□□ 2.89
CD47-202ENST00000361309 SENP3Q9H4L4 574 aaPredicted RBP33.07■■■□□ 2.88
CD47-202ENST00000361309 CHIC2Q9UKJ5 165 aa33.06■■■□□ 2.88
CD47-202ENST00000361309 EID1Q9Y6B2 187 aa33.06■■■□□ 2.88
CD47-202ENST00000361309 ANKRD30AQ9BXX3 1397 aa33.04■■■□□ 2.88
CD47-202ENST00000361309 KDM5AP29375 1690 aaKnown RBP33.03■■■□□ 2.88
CD47-202ENST00000361309 TMEM2Q9UHN6 1383 aa33.02■■■□□ 2.88
CD47-202ENST00000361309 STAG3Q9UJ98 1225 aa33.02■■■□□ 2.88
CD47-202ENST00000361309 LMTK2Q8IWU2 1503 aa33.02■■■□□ 2.88
CD47-202ENST00000361309 EFCAB6Q5THR3 1501 aa32.98■■■□□ 2.87
CD47-202ENST00000361309 PHF23Q9BUL5 403 aaPredicted RBP32.98■■■□□ 2.87
CD47-202ENST00000361309 IDI1Q13907 227 aa32.97■■■□□ 2.87
CD47-202ENST00000361309 NOS1P29475 1434 aa32.9■■■□□ 2.86
CD47-202ENST00000361309 ADGRL2O95490 1459 aa32.89■■■□□ 2.86
CD47-202ENST00000361309 TET3O43151 1660 aa32.88■■■□□ 2.85
CD47-202ENST00000361309 ADGRB3O60242 1522 aa32.87■■■□□ 2.85
CD47-202ENST00000361309 SLC26A8Q96RN1 970 aa32.85■■■□□ 2.85
CD47-202ENST00000361309 MYO5BQ9ULV0 1848 aa32.84■■■□□ 2.85
CD47-202ENST00000361309 KCNA6P17658 529 aa32.84■■■□□ 2.85
CD47-202ENST00000361309 TMEM94Q12767 1356 aa32.83■■■□□ 2.85
CD47-202ENST00000361309 FAM50AQ14320 339 aaKnown RBP32.83■■■□□ 2.85
CD47-202ENST00000361309 SLC52A1Q9NWF4 448 aa32.81■■■□□ 2.84
CD47-202ENST00000361309 FAM135BQ49AJ0 1406 aa32.79■■■□□ 2.84
CD47-202ENST00000361309 ANKRD50Q9ULJ7 1429 aa32.79■■■□□ 2.84
CD47-202ENST00000361309 PROSER2Q86WR7 435 aaPredicted RBP32.78■■■□□ 2.84
CD47-202ENST00000361309 RBM33Q96EV2 1170 aaKnown RBP32.77■■■□□ 2.84
CD47-202ENST00000361309 RPRD2Q5VT52 1461 aaKnown RBP32.77■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms