RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 DYNC1I1O14576 645 aa5.12□□□□□ -1.59
SYNE2-204ENST00000358025 FYCO1Q9BQS8 1478 aa5.12□□□□□ -1.59
SYNE2-204ENST00000358025 TSPYL1Q9H0U9 437 aa5.12□□□□□ -1.59
SYNE2-204ENST00000358025 SALL2Q9Y467 1007 aaPredicted RBP5.12□□□□□ -1.59
SYNE2-204ENST00000358025 CUX1P39880 1505 aa5.12□□□□□ -1.59
SYNE2-204ENST00000358025 TEX35Q5T0J7 233 aa5.12□□□□□ -1.59
SYNE2-204ENST00000358025 SCAPERQ9BY12 1400 aa5.11□□□□□ -1.59
SYNE2-204ENST00000358025 ESPNB1AK53 854 aa5.11□□□□□ -1.59
SYNE2-204ENST00000358025 FGD6Q6ZV73 1430 aa5.11□□□□□ -1.59
SYNE2-204ENST00000358025 REC8O95072 547 aa5.11□□□□□ -1.59
SYNE2-204ENST00000358025 CDK11BP21127 795 aaKnown RBP5.11□□□□□ -1.59
SYNE2-204ENST00000358025 LMOD3Q0VAK6 560 aa5.11□□□□□ -1.59
SYNE2-204ENST00000358025 MYOM3Q5VTT5 1437 aa5.11□□□□□ -1.59
SYNE2-204ENST00000358025 CREBRFQ8IUR6 639 aa5.11□□□□□ -1.59
SYNE2-204ENST00000358025 KIF3AQ9Y496 699 aa5.11□□□□□ -1.59
SYNE2-204ENST00000358025 CADPSQ9ULU8 1353 aa5.11□□□□□ -1.59
SYNE2-204ENST00000358025 WDR63Q8IWG1 891 aa5.11□□□□□ -1.59
SYNE2-204ENST00000358025 GPS2Q13227 327 aa5.11□□□□□ -1.59
SYNE2-204ENST00000358025 TUBB4BP68371 445 aa5.11□□□□□ -1.59
SYNE2-204ENST00000358025 ARXQ96QS3 562 aa5.11□□□□□ -1.59
SYNE2-204ENST00000358025 FAM193AP78312 1265 aa5.11□□□□□ -1.59
SYNE2-204ENST00000358025 PRKCSHP14314 528 aaPredicted RBP5.1□□□□□ -1.59
SYNE2-204ENST00000358025 CCDC39Q9UFE4 941 aa5.1□□□□□ -1.59
SYNE2-204ENST00000358025 CLCN1P35523 988 aa5.1□□□□□ -1.59
SYNE2-204ENST00000358025 MBD3O95983 291 aa5.1□□□□□ -1.59
SYNE2-204ENST00000358025 CALRP27797 417 aaKnown RBP5.1□□□□□ -1.59
SYNE2-204ENST00000358025 NCOA1Q15788 1441 aa5.1□□□□□ -1.59
SYNE2-204ENST00000358025 TAOK2Q9UL54 1235 aa5.1□□□□□ -1.59
SYNE2-204ENST00000358025 DNTTIP2Q5QJE6 756 aaKnown RBP5.1□□□□□ -1.59
SYNE2-204ENST00000358025 ATAD2BQ9ULI0 1458 aa5.1□□□□□ -1.59
SYNE2-204ENST00000358025 USP47Q96K76 1375 aa5.1□□□□□ -1.59
SYNE2-204ENST00000358025 CCDC66A2RUB6 948 aa5.09□□□□□ -1.59
SYNE2-204ENST00000358025 CAVIN2O95810 425 aa5.09□□□□□ -1.59
SYNE2-204ENST00000358025 TULP1O00294 542 aaPredicted RBP5.09□□□□□ -1.59
SYNE2-204ENST00000358025 KCNH8Q96L42 1107 aa5.09□□□□□ -1.59
SYNE2-204ENST00000358025 NCAPD3P42695 1498 aa5.09□□□□□ -1.59
SYNE2-204ENST00000358025 WIZO95785 1651 aa5.09□□□□□ -1.59
SYNE2-204ENST00000358025 TPRNQ4KMQ1 711 aa5.09□□□□□ -1.59
SYNE2-204ENST00000358025 ZRSR1Q15695 479 aaKnown RBP5.09□□□□□ -1.59
SYNE2-204ENST00000358025 CENPJQ9HC77 1338 aaPredicted RBP5.09□□□□□ -1.59
SYNE2-204ENST00000358025 HMMRO75330 724 aa5.09□□□□□ -1.59
SYNE2-204ENST00000358025 A0A0U1RQG5 324 aaPredicted RBP5.09□□□□□ -1.6
SYNE2-204ENST00000358025 CCDC34Q96HJ3 373 aa5.09□□□□□ -1.6
SYNE2-204ENST00000358025 SLKQ9H2G2 1235 aaPredicted RBP5.08□□□□□ -1.6
SYNE2-204ENST00000358025 EFCAB5A4FU69 1503 aa5.08□□□□□ -1.6
SYNE2-204ENST00000358025 PKD2Q13563 968 aa5.08□□□□□ -1.6
SYNE2-204ENST00000358025 PRIMPOLQ96LW4 560 aa5.08□□□□□ -1.6
SYNE2-204ENST00000358025 RBM25P49756 843 aaKnown RBP5.08□□□□□ -1.6
SYNE2-204ENST00000358025 BCL11BQ9C0K0 894 aaPredicted RBP5.08□□□□□ -1.6
SYNE2-204ENST00000358025 KIF7Q2M1P5 1343 aa5.08□□□□□ -1.6
SYNE2-204ENST00000358025 TRAK2O60296 914 aa5.08□□□□□ -1.6
SYNE2-204ENST00000358025 FGD5Q6ZNL6 1462 aa5.08□□□□□ -1.6
SYNE2-204ENST00000358025 AMER1Q5JTC6 1135 aaPredicted RBP5.08□□□□□ -1.6
SYNE2-204ENST00000358025 PUS7Q96PZ0 661 aaKnown RBP5.08□□□□□ -1.6
SYNE2-204ENST00000358025 CHIC2Q9UKJ5 165 aa5.08□□□□□ -1.6
SYNE2-204ENST00000358025 TPM4P67936 248 aa5.08□□□□□ -1.6
SYNE2-204ENST00000358025 GTPBP4Q9BZE4 634 aaKnown RBP5.08□□□□□ -1.6
SYNE2-204ENST00000358025 TUBB4AP04350 444 aa5.08□□□□□ -1.6
SYNE2-204ENST00000358025 ZSCAN30Q86W11 494 aa5.07□□□□□ -1.6
SYNE2-204ENST00000358025 SNX21Q969T3 373 aa5.07□□□□□ -1.6
SYNE2-204ENST00000358025 RABEP1Q15276 862 aa5.07□□□□□ -1.6
SYNE2-204ENST00000358025 HIRIP3Q9BW71 556 aaPredicted RBP5.07□□□□□ -1.6
SYNE2-204ENST00000358025 MSH5O43196 834 aa5.07□□□□□ -1.6
SYNE2-204ENST00000358025 HDGFP51858 240 aaKnown RBP5.07□□□□□ -1.6
SYNE2-204ENST00000358025 KDM2AQ9Y2K7 1162 aa5.07□□□□□ -1.6
SYNE2-204ENST00000358025 CHGAP10645 457 aaKnown RBP5.07□□□□□ -1.6
SYNE2-204ENST00000358025 DDX19BQ9UMR2 479 aa5.07□□□□□ -1.6
SYNE2-204ENST00000358025 KIAA1211Q6ZU35 1233 aa5.07□□□□□ -1.6
SYNE2-204ENST00000358025 DCAF11Q8TEB1 546 aa5.07□□□□□ -1.6
SYNE2-204ENST00000358025 MCM4P33991 863 aa5.07□□□□□ -1.6
SYNE2-204ENST00000358025 KIF2AO00139 706 aaPredicted RBP5.07□□□□□ -1.6
SYNE2-204ENST00000358025 ZMYM4Q5VZL5 1548 aa5.06□□□□□ -1.6
SYNE2-204ENST00000358025 GOLGA6L1Q8N7Z2 621 aa5.06□□□□□ -1.6
SYNE2-204ENST00000358025 NASPP49321 788 aaPredicted RBP5.06□□□□□ -1.6
SYNE2-204ENST00000358025 CCP110O43303 1012 aa5.06□□□□□ -1.6
SYNE2-204ENST00000358025 KANK1Q14678 1352 aa5.06□□□□□ -1.6
SYNE2-204ENST00000358025 VSIG10Q8N0Z9 540 aa5.06□□□□□ -1.6
SYNE2-204ENST00000358025 FRAT1Q92837 279 aaPredicted RBP5.06□□□□□ -1.6
SYNE2-204ENST00000358025 NPC1L1Q9UHC9 1359 aa5.06□□□□□ -1.6
SYNE2-204ENST00000358025 TOP2BQ02880 1626 aa5.06□□□□□ -1.6
SYNE2-204ENST00000358025 TPM1P09493 284 aa5.06□□□□□ -1.6
SYNE2-204ENST00000358025 RNF20Q5VTR2 975 aa5.06□□□□□ -1.6
SYNE2-204ENST00000358025 TERF2IPQ9NYB0 399 aa5.05□□□□□ -1.6
SYNE2-204ENST00000358025 TNNT3P45378 269 aaPredicted RBP5.05□□□□□ -1.6
SYNE2-204ENST00000358025 ZKSCAN2Q63HK3 967 aa5.05□□□□□ -1.6
SYNE2-204ENST00000358025 GRPEL1Q9HAV7 217 aa5.05□□□□□ -1.6
SYNE2-204ENST00000358025 UVSSAQ2YD98 709 aa5.05□□□□□ -1.6
SYNE2-204ENST00000358025 DDX49Q9Y6V7 483 aaKnown RBP5.05□□□□□ -1.6
SYNE2-204ENST00000358025 ANKRD30BQ9BXX2 1392 aa5.05□□□□□ -1.6
SYNE2-204ENST00000358025 ST20-MTHFSA0A0A6YYL1 179 aa5.05□□□□□ -1.6
SYNE2-204ENST00000358025 NOM1Q5C9Z4 860 aaKnown RBP5.05□□□□□ -1.6
SYNE2-204ENST00000358025 TBC1D32Q96NH3 1257 aa5.05□□□□□ -1.6
SYNE2-204ENST00000358025 PEG3Q9GZU2 1588 aa5.05□□□□□ -1.6
SYNE2-204ENST00000358025 PANK3Q9H999 370 aa5.05□□□□□ -1.6
SYNE2-204ENST00000358025 CTR9Q6PD62 1173 aa5.05□□□□□ -1.6
SYNE2-204ENST00000358025 GPATCH3Q96I76 525 aa5.05□□□□□ -1.6
SYNE2-204ENST00000358025 CLUAP1Q96AJ1 413 aa5.05□□□□□ -1.6
SYNE2-204ENST00000358025 CARMIL2Q6F5E8 1435 aa5.05□□□□□ -1.6
SYNE2-204ENST00000358025 FAM107BQ9H098 131 aa5.05□□□□□ -1.6
SYNE2-204ENST00000358025 WWC1Q8IX03 1113 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms