RNA–Protein interactions for RNA: ENST00000345535.8

SLX1A-202, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLX1A, Length 762 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-202ENST00000345535 NCOA2Q15596 1464 aa28.55■■■□□ 2.16
SLX1A-202ENST00000345535 TNRQ92752 1358 aa28.55■■■□□ 2.16
SLX1A-202ENST00000345535 KDM5DQ9BY66 1539 aa28.54■■■□□ 2.16
SLX1A-202ENST00000345535 CAMSAP2Q08AD1 1489 aa28.54■■■□□ 2.16
SLX1A-202ENST00000345535 SOCS7O14512 581 aa28.54■■■□□ 2.16
SLX1A-202ENST00000345535 TSPY4P0CV99 314 aa28.54■■■□□ 2.16
SLX1A-202ENST00000345535 TSPY10P0CW01 314 aa28.54■■■□□ 2.16
SLX1A-202ENST00000345535 WASHC2CQ9Y4E1 1318 aa28.53■■■□□ 2.16
SLX1A-202ENST00000345535 PZPP20742 1482 aa28.53■■■□□ 2.16
SLX1A-202ENST00000345535 DNMT1P26358 1616 aaKnown RBP28.52■■■□□ 2.16
SLX1A-202ENST00000345535 ILDR2Q71H61 639 aa28.52■■■□□ 2.16
SLX1A-202ENST00000345535 ARHGEF5Q12774 1597 aa28.48■■■□□ 2.15
SLX1A-202ENST00000345535 THEMISQ8N1K5 641 aaPredicted RBP28.47■■■□□ 2.15
SLX1A-202ENST00000345535 NLRP1Q9C000 1473 aa28.46■■■□□ 2.15
SLX1A-202ENST00000345535 ANKLE2Q86XL3 938 aa28.45■■■□□ 2.14
SLX1A-202ENST00000345535 FBXO31Q5XUX0 539 aaPredicted RBP28.44■■■□□ 2.14
SLX1A-202ENST00000345535 CPS1P31327 1500 aa28.43■■■□□ 2.14
SLX1A-202ENST00000345535 POLR1AO95602 1720 aaPredicted RBP28.43■■■□□ 2.14
SLX1A-202ENST00000345535 MIA2Q96PC5 1412 aa28.43■■■□□ 2.14
SLX1A-202ENST00000345535 TOM1O60784 492 aa28.39■■■□□ 2.14
SLX1A-202ENST00000345535 VPS8Q8N3P4 1428 aa28.37■■■□□ 2.13
SLX1A-202ENST00000345535 SHANK2Q9UPX8 1470 aa28.37■■■□□ 2.13
SLX1A-202ENST00000345535 LRRC9Q6ZRR7 1453 aa28.36■■■□□ 2.13
SLX1A-202ENST00000345535 UGGT1Q9NYU2 1555 aa28.36■■■□□ 2.13
SLX1A-202ENST00000345535 NEURL4Q96JN8 1562 aa28.35■■■□□ 2.13
SLX1A-202ENST00000345535 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.35■■■□□ 2.131e-15■■■□□ 16.1
SLX1A-202ENST00000345535 MAST1Q9Y2H9 1570 aa28.33■■■□□ 2.13
SLX1A-202ENST00000345535 RNF17Q9BXT8 1623 aaKnown RBP28.32■■■□□ 2.12
SLX1A-202ENST00000345535 ZC3H13Q5T200 1668 aaKnown RBP28.32■■■□□ 2.12
SLX1A-202ENST00000345535 SCAF1Q9H7N4 1312 aaKnown RBP28.32■■■□□ 2.12
SLX1A-202ENST00000345535 DEPDC5O75140 1603 aa28.32■■■□□ 2.12
SLX1A-202ENST00000345535 MED14O60244 1454 aa28.31■■■□□ 2.12
SLX1A-202ENST00000345535 EIF2AK4Q9P2K8 1649 aaKnown RBP28.3■■■□□ 2.12
SLX1A-202ENST00000345535 MAP3K1Q13233 1512 aa28.3■■■□□ 2.12
SLX1A-202ENST00000345535 NPHP4O75161 1426 aaPredicted RBP28.3■■■□□ 2.12
SLX1A-202ENST00000345535 ABCC3O15438 1527 aa28.28■■■□□ 2.12
SLX1A-202ENST00000345535 MYOM3Q5VTT5 1437 aa28.26■■■□□ 2.12
SLX1A-202ENST00000345535 PIP4K2BP78356 416 aa28.26■■■□□ 2.11
SLX1A-202ENST00000345535 VWDEQ8N2E2 1590 aa28.23■■■□□ 2.11
SLX1A-202ENST00000345535 DUOX2Q9NRD8 1548 aa28.22■■■□□ 2.11
SLX1A-202ENST00000345535 ERVK-7P63135 1459 aa28.21■■■□□ 2.11
SLX1A-202ENST00000345535 HSPA1LP34931 641 aa28.21■■■□□ 2.11
SLX1A-202ENST00000345535 IQGAP1P46940 1657 aa28.21■■■□□ 2.11
SLX1A-202ENST00000345535 KANK4Q5T7N3 995 aaPredicted RBP28.16■■■□□ 2.1
SLX1A-202ENST00000345535 APLP2Q06481 763 aa28.15■■■□□ 2.1
SLX1A-202ENST00000345535 MROH1Q8NDA8 1641 aa28.13■■■□□ 2.09
SLX1A-202ENST00000345535 KIF15Q9NS87 1388 aa28.12■■■□□ 2.09
SLX1A-202ENST00000345535 ARHGAP31Q2M1Z3 1444 aa28.12■■■□□ 2.09
SLX1A-202ENST00000345535 ERBINQ96RT1 1412 aa28.12■■■□□ 2.09
SLX1A-202ENST00000345535 SYNMO15061 1565 aa28.11■■■□□ 2.09
SLX1A-202ENST00000345535 LOC105371045A0A1W2PR82 267 aa28.11■■■□□ 2.09
SLX1A-202ENST00000345535 SCAF11Q99590 1463 aaKnown RBP28.1■■■□□ 2.09
SLX1A-202ENST00000345535 MED1Q15648 1581 aaPredicted RBP28.1■■■□□ 2.09
SLX1A-202ENST00000345535 CEP152O94986 1710 aa28.09■■■□□ 2.09
SLX1A-202ENST00000345535 EID1Q9Y6B2 187 aa28.09■■■□□ 2.09
SLX1A-202ENST00000345535 KANK1Q14678 1352 aa28.09■■■□□ 2.09
SLX1A-202ENST00000345535 PRDM15P57071 1507 aaPredicted RBP28.08■■■□□ 2.09
SLX1A-202ENST00000345535 UBR1Q8IWV7 1749 aa28.08■■■□□ 2.09
SLX1A-202ENST00000345535 CFAP65Q6ZU64 1925 aaKnown RBP28.08■■■□□ 2.09
SLX1A-202ENST00000345535 LRRC7Q96NW7 1537 aa28.07■■■□□ 2.08
SLX1A-202ENST00000345535 SLIT1O75093 1534 aa28.04■■■□□ 2.08
SLX1A-202ENST00000345535 TXNDC2Q86VQ3 553 aa28.04■■■□□ 2.08
SLX1A-202ENST00000345535 PHF23Q9BUL5 403 aaPredicted RBP28.04■■■□□ 2.08
SLX1A-202ENST00000345535 RRP7BPQ9NSQ0 103 aa28.04■■■□□ 2.08
SLX1A-202ENST00000345535 ARHGAP23Q9P227 1491 aa28.03■■■□□ 2.08
SLX1A-202ENST00000345535 ABCC5O15440 1437 aa28.03■■■□□ 2.08
SLX1A-202ENST00000345535 STAG3Q9UJ98 1225 aa28.02■■■□□ 2.08
SLX1A-202ENST00000345535 CROCC2H7BZ55 1655 aa28.02■■■□□ 2.08
SLX1A-202ENST00000345535 PTPN23Q9H3S7 1636 aa28.02■■■□□ 2.08
SLX1A-202ENST00000345535 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28■■■□□ 2.07
SLX1A-202ENST00000345535 DAPK1P53355 1430 aa27.99■■■□□ 2.07
SLX1A-202ENST00000345535 STRCP1A6NGW2 1772 aa27.99■■■□□ 2.07
SLX1A-202ENST00000345535 ANKRD30AQ9BXX3 1397 aa27.99■■■□□ 2.07
SLX1A-202ENST00000345535 ALKQ9UM73 1620 aa27.98■■■□□ 2.07
SLX1A-202ENST00000345535 LTKP29376 864 aa27.97■■■□□ 2.07
SLX1A-202ENST00000345535 FGD6Q6ZV73 1430 aa27.95■■■□□ 2.07
SLX1A-202ENST00000345535 TMEM2Q9UHN6 1383 aa27.95■■■□□ 2.06
SLX1A-202ENST00000345535 KDM5AP29375 1690 aaKnown RBP27.94■■■□□ 2.06
SLX1A-202ENST00000345535 LMTK2Q8IWU2 1503 aa27.92■■■□□ 2.06
SLX1A-202ENST00000345535 PIK3C2BO00750 1634 aa27.9■■■□□ 2.06
SLX1A-202ENST00000345535 EFCAB6Q5THR3 1501 aa27.9■■■□□ 2.06
SLX1A-202ENST00000345535 SLC52A1Q9NWF4 448 aa27.86■■■□□ 2.05
SLX1A-202ENST00000345535 CHIC2Q9UKJ5 165 aa27.86■■■□□ 2.05
SLX1A-202ENST00000345535 IDI1Q13907 227 aa27.85■■■□□ 2.05
SLX1A-202ENST00000345535 SENP3Q9H4L4 574 aaPredicted RBP27.85■■■□□ 2.05
SLX1A-202ENST00000345535 KCNA6P17658 529 aa27.83■■■□□ 2.05
SLX1A-202ENST00000345535 FAM135BQ49AJ0 1406 aa27.82■■■□□ 2.04
SLX1A-202ENST00000345535 NOS1P29475 1434 aa27.8■■■□□ 2.04
SLX1A-202ENST00000345535 ADGRL2O95490 1459 aa27.79■■■□□ 2.04
SLX1A-202ENST00000345535 RPRD2Q5VT52 1461 aaKnown RBP27.78■■■□□ 2.04
SLX1A-202ENST00000345535 TMEM94Q12767 1356 aa27.78■■■□□ 2.04
SLX1A-202ENST00000345535 HDGFP51858 240 aaKnown RBP27.78■■■□□ 2.04
SLX1A-202ENST00000345535 XIRP1Q702N8 1843 aaKnown RBP27.78■■■□□ 2.04
SLX1A-202ENST00000345535 ADGRB3O60242 1522 aa27.77■■■□□ 2.04
SLX1A-202ENST00000345535 PROSER2Q86WR7 435 aaPredicted RBP27.77■■■□□ 2.04
SLX1A-202ENST00000345535 BCANQ96GW7 911 aa27.75■■■□□ 2.03
SLX1A-202ENST00000345535 SLC26A8Q96RN1 970 aa27.75■■■□□ 2.03
SLX1A-202ENST00000345535 NKTRP30414 1462 aaKnown RBP27.75■■■□□ 2.03
SLX1A-202ENST00000345535 TET3O43151 1660 aa27.74■■■□□ 2.03
SLX1A-202ENST00000345535 ANKRD50Q9ULJ7 1429 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms