RNA–Protein interactions for RNA: ENST00000345535.8

SLX1A-202, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLX1A, Length 762 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-202ENST00000345535 NISCHQ9Y2I1 1504 aa45■■■■■ 4.79
SLX1A-202ENST00000345535 ABCC9O60706 1549 aa40.62■■■■■ 4.09
SLX1A-202ENST00000345535 CCDC180Q9P1Z9 1646 aa40.52■■■■■ 4.08
SLX1A-202ENST00000345535 RB1CC1Q8TDY2 1594 aa38.7■■■■□ 3.79
SLX1A-202ENST00000345535 NACADO15069 1562 aa38.4■■■■□ 3.74
SLX1A-202ENST00000345535 DNAJC5BQ9UF47 199 aa38.19■■■■□ 3.7
SLX1A-202ENST00000345535 DCAF8L2P0C7V8 631 aa38.08■■■■□ 3.69
SLX1A-202ENST00000345535 MYO15BQ96JP2 1530 aa37.84■■■■□ 3.65
SLX1A-202ENST00000345535 PABPN1Q86U42 306 aaKnown RBP eCLIP37.77■■■■□ 3.64
SLX1A-202ENST00000345535 UNC13AQ9UPW8 1703 aa37.64■■■■□ 3.62
SLX1A-202ENST00000345535 BICRAQ9NZM4 1560 aa37.42■■■■□ 3.58
SLX1A-202ENST00000345535 ZCCHC6Q5VYS8 1495 aaKnown RBP37.24■■■■□ 3.55
SLX1A-202ENST00000345535 DCAF1Q9Y4B6 1507 aa37.24■■■■□ 3.55
SLX1A-202ENST00000345535 SHROOM4Q9ULL8 1493 aa37.16■■■■□ 3.54
SLX1A-202ENST00000345535 SCRIBQ14160 1630 aa36.81■■■■□ 3.48
SLX1A-202ENST00000345535 CC2D2AQ9P2K1 1620 aa36.7■■■■□ 3.47
SLX1A-202ENST00000345535 CECR2Q9BXF3 1484 aa36.69■■■■□ 3.46
SLX1A-202ENST00000345535 EIF4G1Q04637 1599 aaKnown RBP36.6■■■■□ 3.45
SLX1A-202ENST00000345535 NCAPD3P42695 1498 aa35.41■■■■□ 3.26
SLX1A-202ENST00000345535 DNAJC5Q9H3Z4 198 aa35.41■■■■□ 3.26
SLX1A-202ENST00000345535 CUX2O14529 1486 aa35.24■■■■□ 3.23
SLX1A-202ENST00000345535 ATAD2BQ9ULI0 1458 aa35.23■■■■□ 3.23
SLX1A-202ENST00000345535 ERCC6Q03468 1493 aa35.22■■■■□ 3.23
SLX1A-202ENST00000345535 SMARCA2P51531 1590 aa35.21■■■■□ 3.23
SLX1A-202ENST00000345535 HMGXB3Q12766 1538 aa35.15■■■■□ 3.22
SLX1A-202ENST00000345535 SMARCA4P51532 1647 aa35.13■■■■□ 3.21
SLX1A-202ENST00000345535 BAZ1AQ9NRL2 1556 aaPredicted RBP35■■■■□ 3.19
SLX1A-202ENST00000345535 BAZ1BQ9UIG0 1483 aaKnown RBP34.93■■■■□ 3.18
SLX1A-202ENST00000345535 PEG3Q9GZU2 1588 aa34.83■■■■□ 3.17
SLX1A-202ENST00000345535 NESP48681 1621 aa34.78■■■■□ 3.16
SLX1A-202ENST00000345535 LAMC3Q9Y6N6 1575 aa34.68■■■■□ 3.14
SLX1A-202ENST00000345535 MROH2BQ7Z745 1585 aa34.6■■■■□ 3.13
SLX1A-202ENST00000345535 PDS5BQ9NTI5 1447 aa34.54■■■■□ 3.12
SLX1A-202ENST00000345535 THOC2Q8NI27 1593 aaKnown RBP34.53■■■■□ 3.12
SLX1A-202ENST00000345535 KIF21AQ7Z4S6 1674 aa34.35■■■■□ 3.09
SLX1A-202ENST00000345535 CADPSQ9ULU8 1353 aa34.34■■■■□ 3.09
SLX1A-202ENST00000345535 MRC2Q9UBG0 1479 aa34.18■■■■□ 3.06
SLX1A-202ENST00000345535 WIZO95785 1651 aa34.15■■■■□ 3.06
SLX1A-202ENST00000345535 WDR62O43379 1518 aa34.07■■■■□ 3.04
SLX1A-202ENST00000345535 CEP164Q9UPV0 1460 aa34.01■■■■□ 3.04
SLX1A-202ENST00000345535 FANCD2Q9BXW9 1451 aa33.92■■■■□ 3.02
SLX1A-202ENST00000345535 CFTRP13569 1480 aa33.88■■■■□ 3.01
SLX1A-202ENST00000345535 RSF1Q96T23 1441 aaPredicted RBP33.86■■■■□ 3.01
SLX1A-202ENST00000345535 TOP2AP11388 1531 aaKnown RBP33.8■■■■□ 3
SLX1A-202ENST00000345535 TRIM41Q8WV44 630 aa33.72■■■□□ 2.99
SLX1A-202ENST00000345535 OSCARQ8IYS5 282 aa33.61■■■□□ 2.97
SLX1A-202ENST00000345535 URB2Q14146 1524 aaKnown RBP33.58■■■□□ 2.97
SLX1A-202ENST00000345535 PRDM2Q13029 1718 aa33.5■■■□□ 2.95
SLX1A-202ENST00000345535 CCDC88BA6NC98 1476 aa33.37■■■□□ 2.93
SLX1A-202ENST00000345535 IFT140Q96RY7 1462 aa33.36■■■□□ 2.93
SLX1A-202ENST00000345535 ABCC8Q09428 1581 aa33.3■■■□□ 2.92
SLX1A-202ENST00000345535 TOPBP1Q92547 1522 aa33.23■■■□□ 2.91
SLX1A-202ENST00000345535 ZNF608Q9ULD9 1512 aaPredicted RBP33.18■■■□□ 2.9
SLX1A-202ENST00000345535 DNMBPQ6XZF7 1577 aa33.13■■■□□ 2.89
SLX1A-202ENST00000345535 RIMBP3CA6NJZ7 1639 aa33.06■■■□□ 2.88
SLX1A-202ENST00000345535 RIMBP3BA6NNM3 1639 aa33.06■■■□□ 2.88
SLX1A-202ENST00000345535 RIMBP3Q9UFD9 1639 aa33.06■■■□□ 2.88
SLX1A-202ENST00000345535 EIF4G3O43432 1585 aaKnown RBP33.04■■■□□ 2.88
SLX1A-202ENST00000345535 ARHGEF11O15085 1522 aa32.97■■■□□ 2.87
SLX1A-202ENST00000345535 TARBP1Q13395 1621 aaKnown RBP32.92■■■□□ 2.86
SLX1A-202ENST00000345535 AQRO60306 1485 aaKnown RBP eCLIP32.88■■■□□ 2.857e-13■■■■□ 23.3
SLX1A-202ENST00000345535 POLA1P09884 1462 aaPredicted RBP32.87■■■□□ 2.85
SLX1A-202ENST00000345535 CHD1O14646 1710 aa32.8■■■□□ 2.84
SLX1A-202ENST00000345535 FBLN2P98095 1184 aa32.8■■■□□ 2.84
SLX1A-202ENST00000345535 SOGA1O94964 1423 aa32.77■■■□□ 2.84
SLX1A-202ENST00000345535 CYB5RLQ6IPT4 315 aa32.76■■■□□ 2.83
SLX1A-202ENST00000345535 WDR97A6NE52 1622 aa32.74■■■□□ 2.83
SLX1A-202ENST00000345535 RAD54L2Q9Y4B4 1467 aa32.7■■■□□ 2.83
SLX1A-202ENST00000345535 TDRD9Q8NDG6 1382 aaKnown RBP32.67■■■□□ 2.82
SLX1A-202ENST00000345535 FGD5Q6ZNL6 1462 aa32.63■■■□□ 2.81
SLX1A-202ENST00000345535 ARAP1Q96P48 1450 aa32.6■■■□□ 2.81
SLX1A-202ENST00000345535 SNAPC4Q5SXM2 1469 aa32.58■■■□□ 2.81
SLX1A-202ENST00000345535 MAGI1Q96QZ7 1491 aaPredicted RBP32.58■■■□□ 2.81
SLX1A-202ENST00000345535 CHMP7Q8WUX9 453 aaPredicted RBP32.57■■■□□ 2.8
SLX1A-202ENST00000345535 CUX1P39880 1505 aa32.54■■■□□ 2.8
SLX1A-202ENST00000345535 GRIN2BQ13224 1484 aa32.54■■■□□ 2.8
SLX1A-202ENST00000345535 TRHP20396 242 aaPredicted RBP32.52■■■□□ 2.8
SLX1A-202ENST00000345535 SYNJ1O43426 1573 aa32.52■■■□□ 2.8
SLX1A-202ENST00000345535 CLASP1Q7Z460 1538 aa32.46■■■□□ 2.79
SLX1A-202ENST00000345535 SYNJ2O15056 1496 aa32.44■■■□□ 2.78
SLX1A-202ENST00000345535 GAPVD1Q14C86 1478 aa32.37■■■□□ 2.77
SLX1A-202ENST00000345535 PBRM1Q86U86 1689 aa32.3■■■□□ 2.76
SLX1A-202ENST00000345535 ABCA10Q8WWZ4 1543 aa32.3■■■□□ 2.76
SLX1A-202ENST00000345535 ABCA5Q8WWZ7 1642 aa32.21■■■□□ 2.75
SLX1A-202ENST00000345535 SUPT5HO00267 1087 aaKnown RBP32.19■■■□□ 2.74
SLX1A-202ENST00000345535 WRNQ14191 1432 aaPredicted RBP eCLIP32.18■■■□□ 2.74
SLX1A-202ENST00000345535 GRIN2AQ12879 1464 aa32.07■■■□□ 2.72
SLX1A-202ENST00000345535 TOP2BQ02880 1626 aa32.01■■■□□ 2.72
SLX1A-202ENST00000345535 ADAMTS12P58397 1594 aa32■■■□□ 2.71
SLX1A-202ENST00000345535 BIVM-ERCC5R4GMW8 1640 aa32■■■□□ 2.71
SLX1A-202ENST00000345535 FHAD1B1AJZ9 1412 aa31.98■■■□□ 2.71
SLX1A-202ENST00000345535 NUP160Q12769 1436 aa31.98■■■□□ 2.71
SLX1A-202ENST00000345535 ERICH3Q5RHP9 1530 aa31.92■■■□□ 2.7
SLX1A-202ENST00000345535 CEP170Q5SW79 1584 aa31.9■■■□□ 2.7
SLX1A-202ENST00000345535 SHROOM2Q13796 1616 aa31.82■■■□□ 2.69
SLX1A-202ENST00000345535 ERCC6L2Q5T890 1561 aa31.82■■■□□ 2.68
SLX1A-202ENST00000345535 AEBP2Q6ZN18 517 aaPredicted RBP31.79■■■□□ 2.68
SLX1A-202ENST00000345535 PRG4Q92954 1404 aaPredicted RBP31.69■■■□□ 2.66
SLX1A-202ENST00000345535 JPH4Q96JJ6 628 aa31.68■■■□□ 2.66
SLX1A-202ENST00000345535 NPM1P06748 294 aaKnown RBP eCLIP31.55■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms