RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 FGD6Q6ZV73 1430 aa28.71■■■□□ 2.19
CDHR4-201ENST00000343366 RSPH4AQ5TD94 716 aa28.71■■■□□ 2.19
CDHR4-201ENST00000343366 UBAP1LF5GYI3 381 aa28.7■■■□□ 2.18
CDHR4-201ENST00000343366 A2ML1A8K2U0 1454 aa28.69■■■□□ 2.18
CDHR4-201ENST00000343366 NEURL4Q96JN8 1562 aa28.68■■■□□ 2.18
CDHR4-201ENST00000343366 PPARGC1BQ86YN6 1023 aaKnown RBP28.68■■■□□ 2.18
CDHR4-201ENST00000343366 PPP6R1Q9UPN7 881 aa28.68■■■□□ 2.18
CDHR4-201ENST00000343366 POLR1AO95602 1720 aaPredicted RBP28.68■■■□□ 2.18
CDHR4-201ENST00000343366 CAMSAP2Q08AD1 1489 aa28.67■■■□□ 2.18
CDHR4-201ENST00000343366 PTPN23Q9H3S7 1636 aa28.67■■■□□ 2.18
CDHR4-201ENST00000343366 MBD5Q9P267 1494 aa28.66■■■□□ 2.18
CDHR4-201ENST00000343366 GGT6Q6P531 493 aa28.62■■■□□ 2.17
CDHR4-201ENST00000343366 ARHGEF5Q12774 1597 aa28.61■■■□□ 2.17
CDHR4-201ENST00000343366 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.61■■■□□ 2.17
CDHR4-201ENST00000343366 MED1Q15648 1581 aaPredicted RBP28.6■■■□□ 2.17
CDHR4-201ENST00000343366 RTEL1-TNFRSF6BF6WH68 1400 aa28.6■■■□□ 2.17
CDHR4-201ENST00000343366 CPS1P31327 1500 aa28.59■■■□□ 2.17
CDHR4-201ENST00000343366 ZNF644Q9H582 1327 aaPredicted RBP28.59■■■□□ 2.17
CDHR4-201ENST00000343366 FAM135AQ9P2D6 1515 aa28.58■■■□□ 2.17
CDHR4-201ENST00000343366 ALKQ9UM73 1620 aa28.58■■■□□ 2.17
CDHR4-201ENST00000343366 CCDC141Q6ZP82 1450 aa28.56■■■□□ 2.16
CDHR4-201ENST00000343366 RRBP1Q9P2E9 1410 aaKnown RBP28.56■■■□□ 2.16
CDHR4-201ENST00000343366 VWDEQ8N2E2 1590 aa28.55■■■□□ 2.16
CDHR4-201ENST00000343366 PZPP20742 1482 aa28.54■■■□□ 2.16
CDHR4-201ENST00000343366 DHX29Q7Z478 1369 aaKnown RBP28.54■■■□□ 2.16
CDHR4-201ENST00000343366 SHANK2Q9UPX8 1470 aa28.53■■■□□ 2.16
CDHR4-201ENST00000343366 TSPY4P0CV99 314 aa28.52■■■□□ 2.16
CDHR4-201ENST00000343366 TSPY10P0CW01 314 aa28.52■■■□□ 2.16
CDHR4-201ENST00000343366 KDM5DQ9BY66 1539 aa28.52■■■□□ 2.16
CDHR4-201ENST00000343366 HSPA1LP34931 641 aa28.51■■■□□ 2.15
CDHR4-201ENST00000343366 FAM50AQ14320 339 aaKnown RBP28.5■■■□□ 2.15
CDHR4-201ENST00000343366 TNRQ92752 1358 aa28.5■■■□□ 2.15
CDHR4-201ENST00000343366 DEPDC5O75140 1603 aa28.49■■■□□ 2.15
CDHR4-201ENST00000343366 MED14O60244 1454 aa28.48■■■□□ 2.15
CDHR4-201ENST00000343366 FBXO31Q5XUX0 539 aaPredicted RBP28.47■■■□□ 2.15
CDHR4-201ENST00000343366 MAST1Q9Y2H9 1570 aa28.45■■■□□ 2.14
CDHR4-201ENST00000343366 CROCC2H7BZ55 1655 aa28.45■■■□□ 2.14
CDHR4-201ENST00000343366 DAPK1P53355 1430 aa28.44■■■□□ 2.14
CDHR4-201ENST00000343366 STRCP1A6NGW2 1772 aa28.42■■■□□ 2.14
CDHR4-201ENST00000343366 NLRP1Q9C000 1473 aa28.42■■■□□ 2.14
CDHR4-201ENST00000343366 TOM1O60784 492 aa28.41■■■□□ 2.14
CDHR4-201ENST00000343366 ABCC5O15440 1437 aa28.41■■■□□ 2.14
CDHR4-201ENST00000343366 UGGT1Q9NYU2 1555 aa28.38■■■□□ 2.13
CDHR4-201ENST00000343366 IQGAP1P46940 1657 aa28.38■■■□□ 2.13
CDHR4-201ENST00000343366 KIF3BO15066 747 aa28.37■■■□□ 2.13
CDHR4-201ENST00000343366 PIP4K2BP78356 416 aa28.37■■■□□ 2.13
CDHR4-201ENST00000343366 NPHP4O75161 1426 aaPredicted RBP28.36■■■□□ 2.13
CDHR4-201ENST00000343366 RNF17Q9BXT8 1623 aaKnown RBP28.36■■■□□ 2.13
CDHR4-201ENST00000343366 ANKLE2Q86XL3 938 aa28.34■■■□□ 2.13
CDHR4-201ENST00000343366 SCAF1Q9H7N4 1312 aaKnown RBP28.32■■■□□ 2.12
CDHR4-201ENST00000343366 ZC3H13Q5T200 1668 aaKnown RBP28.32■■■□□ 2.12
CDHR4-201ENST00000343366 THEMISQ8N1K5 641 aaPredicted RBP28.31■■■□□ 2.12
CDHR4-201ENST00000343366 ANKRD30AQ9BXX3 1397 aa28.31■■■□□ 2.12
CDHR4-201ENST00000343366 SYNMO15061 1565 aa28.31■■■□□ 2.12
CDHR4-201ENST00000343366 LRRC7Q96NW7 1537 aa28.3■■■□□ 2.12
CDHR4-201ENST00000343366 ADGRL2O95490 1459 aa28.3■■■□□ 2.12
CDHR4-201ENST00000343366 WASHC2CQ9Y4E1 1318 aa28.3■■■□□ 2.12
CDHR4-201ENST00000343366 ROCK1Q13464 1354 aa28.28■■■□□ 2.12
CDHR4-201ENST00000343366 ABCC3O15438 1527 aa28.28■■■□□ 2.12
CDHR4-201ENST00000343366 MROH1Q8NDA8 1641 aa28.26■■■□□ 2.11
CDHR4-201ENST00000343366 EIF2AK4Q9P2K8 1649 aaKnown RBP28.23■■■□□ 2.11
CDHR4-201ENST00000343366 UBR1Q8IWV7 1749 aa28.23■■■□□ 2.11
CDHR4-201ENST00000343366 DUOX2Q9NRD8 1548 aa28.23■■■□□ 2.11
CDHR4-201ENST00000343366 ERVK-7P63135 1459 aa28.22■■■□□ 2.11
CDHR4-201ENST00000343366 XIRP1Q702N8 1843 aaKnown RBP28.21■■■□□ 2.11
CDHR4-201ENST00000343366 ITGAEP38570 1179 aa28.21■■■□□ 2.11
CDHR4-201ENST00000343366 CHIC2Q9UKJ5 165 aa28.21■■■□□ 2.11
CDHR4-201ENST00000343366 KIF15Q9NS87 1388 aa28.2■■■□□ 2.1
CDHR4-201ENST00000343366 ERBINQ96RT1 1412 aa28.17■■■□□ 2.1
CDHR4-201ENST00000343366 RRP7BPQ9NSQ0 103 aa28.16■■■□□ 2.1
CDHR4-201ENST00000343366 ARHGAP23Q9P227 1491 aa28.15■■■□□ 2.1
CDHR4-201ENST00000343366 CEP152O94986 1710 aa28.15■■■□□ 2.1
CDHR4-201ENST00000343366 SLIT1O75093 1534 aa28.13■■■□□ 2.09
CDHR4-201ENST00000343366 CFAP65Q6ZU64 1925 aaKnown RBP28.12■■■□□ 2.09
CDHR4-201ENST00000343366 SCAF11Q99590 1463 aaKnown RBP28.11■■■□□ 2.09
CDHR4-201ENST00000343366 PHF23Q9BUL5 403 aaPredicted RBP28.11■■■□□ 2.09
CDHR4-201ENST00000343366 TRIM26Q12899 539 aaPredicted RBP28.1■■■□□ 2.09
CDHR4-201ENST00000343366 RGS17Q9UGC6 210 aaPredicted RBP28.1■■■□□ 2.09
CDHR4-201ENST00000343366 HFM1A2PYH4 1435 aa28.08■■■□□ 2.09
CDHR4-201ENST00000343366 ANKRD50Q9ULJ7 1429 aa28.08■■■□□ 2.09
CDHR4-201ENST00000343366 ACIN1Q9UKV3 1341 aaKnown RBP28.07■■■□□ 2.08
CDHR4-201ENST00000343366 GCC2Q8IWJ2 1684 aa28.07■■■□□ 2.08
CDHR4-201ENST00000343366 PRDM15P57071 1507 aaPredicted RBP28.05■■■□□ 2.08
CDHR4-201ENST00000343366 ARHGAP31Q2M1Z3 1444 aa28.04■■■□□ 2.08
CDHR4-201ENST00000343366 LTKP29376 864 aa28.04■■■□□ 2.08
CDHR4-201ENST00000343366 NAIPQ13075 1403 aa28.01■■■□□ 2.08
CDHR4-201ENST00000343366 KDM5AP29375 1690 aaKnown RBP27.99■■■□□ 2.07
CDHR4-201ENST00000343366 PIK3C2BO00750 1634 aa27.98■■■□□ 2.07
CDHR4-201ENST00000343366 FAM135BQ49AJ0 1406 aa27.97■■■□□ 2.07
CDHR4-201ENST00000343366 SENP3Q9H4L4 574 aaPredicted RBP27.94■■■□□ 2.06
CDHR4-201ENST00000343366 KANK1Q14678 1352 aa27.94■■■□□ 2.06
CDHR4-201ENST00000343366 SETD5Q9C0A6 1442 aa27.92■■■□□ 2.06
CDHR4-201ENST00000343366 TET3O43151 1660 aa27.92■■■□□ 2.06
CDHR4-201ENST00000343366 TXNDC2Q86VQ3 553 aa27.92■■■□□ 2.06
CDHR4-201ENST00000343366 TMEM2Q9UHN6 1383 aa27.91■■■□□ 2.06
CDHR4-201ENST00000343366 UNC13BO14795 1591 aa27.9■■■□□ 2.06
CDHR4-201ENST00000343366 ROBO1Q9Y6N7 1651 aa27.89■■■□□ 2.06
CDHR4-201ENST00000343366 HRCP23327 699 aa27.88■■■□□ 2.05
CDHR4-201ENST00000343366 NWD1Q149M9 1564 aa27.86■■■□□ 2.05
CDHR4-201ENST00000343366 LMTK2Q8IWU2 1503 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms