RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 APLP2Q06481 763 aa26.78■■□□□ 1.88
BRCC3-202ENST00000340647 FGD6Q6ZV73 1430 aa26.78■■□□□ 1.88
BRCC3-202ENST00000340647 ZNF142P52746 1687 aaPredicted RBP26.78■■□□□ 1.88
BRCC3-202ENST00000340647 MROH1Q8NDA8 1641 aa26.77■■□□□ 1.88
BRCC3-202ENST00000340647 DNMT1P26358 1616 aaKnown RBP26.76■■□□□ 1.87
BRCC3-202ENST00000340647 KDM5DQ9BY66 1539 aa26.75■■□□□ 1.87
BRCC3-202ENST00000340647 EIF2AK4Q9P2K8 1649 aaKnown RBP26.74■■□□□ 1.87
BRCC3-202ENST00000340647 FAM135AQ9P2D6 1515 aa26.74■■□□□ 1.87
BRCC3-202ENST00000340647 SHANK2Q9UPX8 1470 aa26.73■■□□□ 1.87
BRCC3-202ENST00000340647 NCOA1Q15788 1441 aa26.73■■□□□ 1.87
BRCC3-202ENST00000340647 DMRT2Q9Y5R5 561 aa26.72■■□□□ 1.87
BRCC3-202ENST00000340647 DAPK1P53355 1430 aa26.72■■□□□ 1.87
BRCC3-202ENST00000340647 CAMSAP1Q5T5Y3 1602 aa26.72■■□□□ 1.87
BRCC3-202ENST00000340647 CEP170BQ9Y4F5 1589 aaPredicted RBP26.71■■□□□ 1.87
BRCC3-202ENST00000340647 FBXO31Q5XUX0 539 aaPredicted RBP26.7■■□□□ 1.86
BRCC3-202ENST00000340647 PZPP20742 1482 aa26.69■■□□□ 1.86
BRCC3-202ENST00000340647 DUOX2Q9NRD8 1548 aa26.69■■□□□ 1.86
BRCC3-202ENST00000340647 ABCC3O15438 1527 aa26.67■■□□□ 1.86
BRCC3-202ENST00000340647 CEP152O94986 1710 aa26.66■■□□□ 1.86
BRCC3-202ENST00000340647 WASHC2CQ9Y4E1 1318 aa26.65■■□□□ 1.86
BRCC3-202ENST00000340647 PTPRTO14522 1441 aa26.65■■□□□ 1.86
BRCC3-202ENST00000340647 ZC3H13Q5T200 1668 aaKnown RBP26.64■■□□□ 1.86
BRCC3-202ENST00000340647 KIF15Q9NS87 1388 aa26.63■■□□□ 1.85
BRCC3-202ENST00000340647 A2ML1A8K2U0 1454 aa26.62■■□□□ 1.85
BRCC3-202ENST00000340647 CFAP65Q6ZU64 1925 aaKnown RBP26.61■■□□□ 1.85
BRCC3-202ENST00000340647 RRP7BPQ9NSQ0 103 aa26.61■■□□□ 1.85
BRCC3-202ENST00000340647 DEPDC5O75140 1603 aa26.61■■□□□ 1.85
BRCC3-202ENST00000340647 PLA2R1Q13018 1463 aa26.6■■□□□ 1.85
BRCC3-202ENST00000340647 TNRQ92752 1358 aa26.59■■□□□ 1.85
BRCC3-202ENST00000340647 LTBP4Q8N2S1 1624 aa26.59■■□□□ 1.85
BRCC3-202ENST00000340647 NCKAP5LQ9HCH0 1330 aa26.59■■□□□ 1.85
BRCC3-202ENST00000340647 PRDM15P57071 1507 aaPredicted RBP26.58■■□□□ 1.85
BRCC3-202ENST00000340647 ERBINQ96RT1 1412 aa26.57■■□□□ 1.84
BRCC3-202ENST00000340647 SPATA31D1Q6ZQQ2 1576 aa26.56■■□□□ 1.84
BRCC3-202ENST00000340647 CHIC2Q9UKJ5 165 aa26.56■■□□□ 1.84
BRCC3-202ENST00000340647 ADGRL2O95490 1459 aa26.55■■□□□ 1.84
BRCC3-202ENST00000340647 ILDR2Q71H61 639 aa26.53■■□□□ 1.84
BRCC3-202ENST00000340647 ERVK-7P63135 1459 aa26.51■■□□□ 1.83
BRCC3-202ENST00000340647 DISP3Q9P2K9 1392 aa26.51■■□□□ 1.83
BRCC3-202ENST00000340647 VWDEQ8N2E2 1590 aa26.5■■□□□ 1.83
BRCC3-202ENST00000340647 NEURL4Q96JN8 1562 aa26.5■■□□□ 1.83
BRCC3-202ENST00000340647 POLR1AO95602 1720 aaPredicted RBP26.5■■□□□ 1.83
BRCC3-202ENST00000340647 ANKRD30AQ9BXX3 1397 aa26.49■■□□□ 1.83
BRCC3-202ENST00000340647 NLRP1Q9C000 1473 aa26.49■■□□□ 1.83
BRCC3-202ENST00000340647 FAM50AQ14320 339 aaKnown RBP26.48■■□□□ 1.83
BRCC3-202ENST00000340647 PKD2Q13563 968 aa26.47■■□□□ 1.83
BRCC3-202ENST00000340647 ARHGAP31Q2M1Z3 1444 aa26.46■■□□□ 1.83
BRCC3-202ENST00000340647 PPARGC1BQ86YN6 1023 aaKnown RBP26.45■■□□□ 1.82
BRCC3-202ENST00000340647 UGGT1Q9NYU2 1555 aa26.45■■□□□ 1.82
BRCC3-202ENST00000340647 IQSEC2Q5JU85 1478 aa26.44■■□□□ 1.82
BRCC3-202ENST00000340647 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.43■■□□□ 1.82
BRCC3-202ENST00000340647 UBR1Q8IWV7 1749 aa26.42■■□□□ 1.82
BRCC3-202ENST00000340647 LMTK2Q8IWU2 1503 aa26.42■■□□□ 1.82
BRCC3-202ENST00000340647 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.41■■□□□ 1.82
BRCC3-202ENST00000340647 ZNF335Q9H4Z2 1342 aaPredicted RBP26.4■■□□□ 1.82
BRCC3-202ENST00000340647 ANKRD50Q9ULJ7 1429 aa26.36■■□□□ 1.81
BRCC3-202ENST00000340647 SOCS7O14512 581 aa26.35■■□□□ 1.81
BRCC3-202ENST00000340647 THEMISQ8N1K5 641 aaPredicted RBP26.35■■□□□ 1.81
BRCC3-202ENST00000340647 MED14O60244 1454 aa26.35■■□□□ 1.81
BRCC3-202ENST00000340647 EFCAB6Q5THR3 1501 aa26.34■■□□□ 1.81
BRCC3-202ENST00000340647 SYNMO15061 1565 aa26.33■■□□□ 1.81
BRCC3-202ENST00000340647 PIK3C2BO00750 1634 aa26.33■■□□□ 1.81
BRCC3-202ENST00000340647 UNC13BO14795 1591 aa26.31■■□□□ 1.8
BRCC3-202ENST00000340647 KANK1Q14678 1352 aa26.31■■□□□ 1.8
BRCC3-202ENST00000340647 ANKLE2Q86XL3 938 aa26.3■■□□□ 1.8
BRCC3-202ENST00000340647 ROCK1Q13464 1354 aa26.3■■□□□ 1.8
BRCC3-202ENST00000340647 NOS1P29475 1434 aa26.29■■□□□ 1.8
BRCC3-202ENST00000340647 ARHGAP23Q9P227 1491 aa26.29■■□□□ 1.8
BRCC3-202ENST00000340647 IQGAP1P46940 1657 aa26.28■■□□□ 1.8
BRCC3-202ENST00000340647 STRCP1A6NGW2 1772 aa26.28■■□□□ 1.8
BRCC3-202ENST00000340647 NPHP4O75161 1426 aaPredicted RBP26.27■■□□□ 1.8
BRCC3-202ENST00000340647 TET3O43151 1660 aa26.26■■□□□ 1.79
BRCC3-202ENST00000340647 SLIT1O75093 1534 aa26.26■■□□□ 1.79
BRCC3-202ENST00000340647 KDM5AP29375 1690 aaKnown RBP26.25■■□□□ 1.79
BRCC3-202ENST00000340647 UBAP1LF5GYI3 381 aa26.24■■□□□ 1.79
BRCC3-202ENST00000340647 GCC2Q8IWJ2 1684 aa26.24■■□□□ 1.79
BRCC3-202ENST00000340647 RRBP1Q9P2E9 1410 aaKnown RBP26.23■■□□□ 1.79
BRCC3-202ENST00000340647 LTKP29376 864 aa26.23■■□□□ 1.79
BRCC3-202ENST00000340647 IDI1Q13907 227 aa26.23■■□□□ 1.79
BRCC3-202ENST00000340647 E9PCH4 1651 aa26.21■■□□□ 1.79
BRCC3-202ENST00000340647 ITGAEP38570 1179 aa26.2■■□□□ 1.78
BRCC3-202ENST00000340647 MYO5BQ9ULV0 1848 aa26.2■■□□□ 1.78
BRCC3-202ENST00000340647 IQGAP3Q86VI3 1631 aa26.2■■□□□ 1.78
BRCC3-202ENST00000340647 SCAF11Q99590 1463 aaKnown RBP26.19■■□□□ 1.78
BRCC3-202ENST00000340647 RPRD2Q5VT52 1461 aaKnown RBP26.18■■□□□ 1.78
BRCC3-202ENST00000340647 CPS1P31327 1500 aa26.15■■□□□ 1.78
BRCC3-202ENST00000340647 TMEM2Q9UHN6 1383 aa26.15■■□□□ 1.78
BRCC3-202ENST00000340647 ADGRB3O60242 1522 aa26.14■■□□□ 1.77
BRCC3-202ENST00000340647 TXNDC2Q86VQ3 553 aa26.13■■□□□ 1.77
BRCC3-202ENST00000340647 ALKQ9UM73 1620 aa26.11■■□□□ 1.77
BRCC3-202ENST00000340647 TMEM131LA2VDJ0 1609 aa26.1■■□□□ 1.77
BRCC3-202ENST00000340647 SLC52A1Q9NWF4 448 aa26.08■■□□□ 1.77
BRCC3-202ENST00000340647 XIRP1Q702N8 1843 aaKnown RBP26.08■■□□□ 1.77
BRCC3-202ENST00000340647 LRRC7Q96NW7 1537 aa26.06■■□□□ 1.76
BRCC3-202ENST00000340647 NUP155O75694 1391 aa26.06■■□□□ 1.76
BRCC3-202ENST00000340647 NAIPQ13075 1403 aa26.05■■□□□ 1.76
BRCC3-202ENST00000340647 ZFYVE9O95405 1425 aa26.04■■□□□ 1.76
BRCC3-202ENST00000340647 HSPA1LP34931 641 aa26.03■■□□□ 1.76
BRCC3-202ENST00000340647 STAG3Q9UJ98 1225 aa26.02■■□□□ 1.76
BRCC3-202ENST00000340647 PIP4K2BP78356 416 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms