RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 DISP3Q9P2K9 1392 aa24.94■■□□□ 1.58
LINC01116-202ENST00000339037 ZNF335Q9H4Z2 1342 aaPredicted RBP24.94■■□□□ 1.58
LINC01116-202ENST00000339037 KIF3BO15066 747 aa24.94■■□□□ 1.58
LINC01116-202ENST00000339037 RSPH4AQ5TD94 716 aa24.94■■□□□ 1.58
LINC01116-202ENST00000339037 PPP4R3CPQ6ZMV5 832 aa24.94■■□□□ 1.58
LINC01116-202ENST00000339037 A2ML1A8K2U0 1454 aa24.92■■□□□ 1.58
LINC01116-202ENST00000339037 KDM5DQ9BY66 1539 aa24.91■■□□□ 1.58
LINC01116-202ENST00000339037 FAM135AQ9P2D6 1515 aa24.9■■□□□ 1.58
LINC01116-202ENST00000339037 TNRQ92752 1358 aa24.88■■□□□ 1.57
LINC01116-202ENST00000339037 PZPP20742 1482 aa24.88■■□□□ 1.57
LINC01116-202ENST00000339037 DNMT1P26358 1616 aaKnown RBP24.87■■□□□ 1.57
LINC01116-202ENST00000339037 ARHGEF5Q12774 1597 aa24.87■■□□□ 1.57
LINC01116-202ENST00000339037 WASHC2CQ9Y4E1 1318 aa24.86■■□□□ 1.57
LINC01116-202ENST00000339037 TSPY4P0CV99 314 aa24.86■■□□□ 1.57
LINC01116-202ENST00000339037 TSPY10P0CW01 314 aa24.86■■□□□ 1.57
LINC01116-202ENST00000339037 FBXO31Q5XUX0 539 aaPredicted RBP24.86■■□□□ 1.57
LINC01116-202ENST00000339037 VPS8Q8N3P4 1428 aa24.86■■□□□ 1.57
LINC01116-202ENST00000339037 LRRC9Q6ZRR7 1453 aa24.84■■□□□ 1.57
LINC01116-202ENST00000339037 UBAP1LF5GYI3 381 aa24.82■■□□□ 1.56
LINC01116-202ENST00000339037 SPATA31D1Q6ZQQ2 1576 aa24.81■■□□□ 1.56
LINC01116-202ENST00000339037 ILDR2Q71H61 639 aa24.8■■□□□ 1.56
LINC01116-202ENST00000339037 MIA2Q96PC5 1412 aa24.78■■□□□ 1.56
LINC01116-202ENST00000339037 NLRP1Q9C000 1473 aa24.77■■□□□ 1.56
LINC01116-202ENST00000339037 NEURL4Q96JN8 1562 aa24.76■■□□□ 1.55
LINC01116-202ENST00000339037 POLR1AO95602 1720 aaPredicted RBP24.76■■□□□ 1.55
LINC01116-202ENST00000339037 LOC105371045A0A1W2PR82 267 aa24.75■■□□□ 1.55
LINC01116-202ENST00000339037 MAST1Q9Y2H9 1570 aa24.75■■□□□ 1.55
LINC01116-202ENST00000339037 THEMISQ8N1K5 641 aaPredicted RBP24.74■■□□□ 1.55
LINC01116-202ENST00000339037 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.74■■□□□ 1.55
LINC01116-202ENST00000339037 RNF17Q9BXT8 1623 aaKnown RBP24.73■■□□□ 1.55
LINC01116-202ENST00000339037 MAP3K1Q13233 1512 aa24.73■■□□□ 1.55
LINC01116-202ENST00000339037 ANKLE2Q86XL3 938 aa24.73■■□□□ 1.55
LINC01116-202ENST00000339037 UGGT1Q9NYU2 1555 aa24.72■■□□□ 1.55
LINC01116-202ENST00000339037 KANK4Q5T7N3 995 aaPredicted RBP24.72■■□□□ 1.55
LINC01116-202ENST00000339037 ABCC3O15438 1527 aa24.71■■□□□ 1.55
LINC01116-202ENST00000339037 MYOM3Q5VTT5 1437 aa24.71■■□□□ 1.55
LINC01116-202ENST00000339037 CPS1P31327 1500 aa24.71■■□□□ 1.55
LINC01116-202ENST00000339037 SHANK2Q9UPX8 1470 aa24.7■■□□□ 1.54
LINC01116-202ENST00000339037 SOCS7O14512 581 aa24.69■■□□□ 1.54
LINC01116-202ENST00000339037 MSH5O43196 834 aa24.69■■□□□ 1.54
LINC01116-202ENST00000339037 ZC3H13Q5T200 1668 aaKnown RBP24.69■■□□□ 1.54
LINC01116-202ENST00000339037 EIF2AK4Q9P2K8 1649 aaKnown RBP24.68■■□□□ 1.54
LINC01116-202ENST00000339037 NPHP4O75161 1426 aaPredicted RBP24.66■■□□□ 1.54
LINC01116-202ENST00000339037 MED14O60244 1454 aa24.65■■□□□ 1.54
LINC01116-202ENST00000339037 DEPDC5O75140 1603 aa24.64■■□□□ 1.54
LINC01116-202ENST00000339037 ERVK-7P63135 1459 aa24.64■■□□□ 1.53
LINC01116-202ENST00000339037 SCAF1Q9H7N4 1312 aaKnown RBP24.63■■□□□ 1.53
LINC01116-202ENST00000339037 MROH1Q8NDA8 1641 aa24.63■■□□□ 1.53
LINC01116-202ENST00000339037 VWDEQ8N2E2 1590 aa24.63■■□□□ 1.53
LINC01116-202ENST00000339037 DUOX2Q9NRD8 1548 aa24.62■■□□□ 1.53
LINC01116-202ENST00000339037 TOM1O60784 492 aa24.62■■□□□ 1.53
LINC01116-202ENST00000339037 PIP4K2BP78356 416 aa24.61■■□□□ 1.53
LINC01116-202ENST00000339037 KIF15Q9NS87 1388 aa24.59■■□□□ 1.53
LINC01116-202ENST00000339037 IQGAP1P46940 1657 aa24.59■■□□□ 1.53
LINC01116-202ENST00000339037 CEP152O94986 1710 aa24.56■■□□□ 1.52
LINC01116-202ENST00000339037 HSPA1LP34931 641 aa24.56■■□□□ 1.52
LINC01116-202ENST00000339037 ERBINQ96RT1 1412 aa24.55■■□□□ 1.52
LINC01116-202ENST00000339037 APLP2Q06481 763 aa24.55■■□□□ 1.52
LINC01116-202ENST00000339037 PRDM15P57071 1507 aaPredicted RBP24.55■■□□□ 1.52
LINC01116-202ENST00000339037 ABCC5O15440 1437 aa24.54■■□□□ 1.52
LINC01116-202ENST00000339037 RRP7BPQ9NSQ0 103 aa24.53■■□□□ 1.52
LINC01116-202ENST00000339037 PTPN23Q9H3S7 1636 aa24.52■■□□□ 1.52
LINC01116-202ENST00000339037 CROCC2H7BZ55 1655 aa24.52■■□□□ 1.52
LINC01116-202ENST00000339037 ARHGAP31Q2M1Z3 1444 aa24.52■■□□□ 1.52
LINC01116-202ENST00000339037 UBR1Q8IWV7 1749 aa24.5■■□□□ 1.51
LINC01116-202ENST00000339037 SCAF11Q99590 1463 aaKnown RBP24.5■■□□□ 1.51
LINC01116-202ENST00000339037 DAPK1P53355 1430 aa24.49■■□□□ 1.51
LINC01116-202ENST00000339037 FGD6Q6ZV73 1430 aa24.48■■□□□ 1.51
LINC01116-202ENST00000339037 CFAP65Q6ZU64 1925 aaKnown RBP24.47■■□□□ 1.51
LINC01116-202ENST00000339037 LRRC7Q96NW7 1537 aa24.47■■□□□ 1.51
LINC01116-202ENST00000339037 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.47■■□□□ 1.51
LINC01116-202ENST00000339037 SYNMO15061 1565 aa24.46■■□□□ 1.51
LINC01116-202ENST00000339037 ALKQ9UM73 1620 aa24.46■■□□□ 1.51
LINC01116-202ENST00000339037 ARHGAP23Q9P227 1491 aa24.45■■□□□ 1.51
LINC01116-202ENST00000339037 KANK1Q14678 1352 aa24.45■■□□□ 1.5
LINC01116-202ENST00000339037 SLIT1O75093 1534 aa24.45■■□□□ 1.5
LINC01116-202ENST00000339037 STRCP1A6NGW2 1772 aa24.44■■□□□ 1.5
LINC01116-202ENST00000339037 MED1Q15648 1581 aaPredicted RBP24.44■■□□□ 1.5
LINC01116-202ENST00000339037 LTKP29376 864 aa24.43■■□□□ 1.5
LINC01116-202ENST00000339037 TXNDC2Q86VQ3 553 aa24.43■■□□□ 1.5
LINC01116-202ENST00000339037 ANKRD30AQ9BXX3 1397 aa24.42■■□□□ 1.5
LINC01116-202ENST00000339037 EID1Q9Y6B2 187 aa24.41■■□□□ 1.5
LINC01116-202ENST00000339037 CHIC2Q9UKJ5 165 aa24.4■■□□□ 1.5
LINC01116-202ENST00000339037 NCBP3Q53F19 620 aaKnown RBP24.38■■□□□ 1.49
LINC01116-202ENST00000339037 STAG3Q9UJ98 1225 aa24.38■■□□□ 1.49
LINC01116-202ENST00000339037 LMTK2Q8IWU2 1503 aa24.38■■□□□ 1.49
LINC01116-202ENST00000339037 PIK3C2BO00750 1634 aa24.38■■□□□ 1.49
LINC01116-202ENST00000339037 TMEM2Q9UHN6 1383 aa24.38■■□□□ 1.49
LINC01116-202ENST00000339037 EFCAB6Q5THR3 1501 aa24.34■■□□□ 1.49
LINC01116-202ENST00000339037 IDI1Q13907 227 aa24.32■■□□□ 1.48
LINC01116-202ENST00000339037 KDM5AP29375 1690 aaKnown RBP24.31■■□□□ 1.48
LINC01116-202ENST00000339037 ADGRL2O95490 1459 aa24.3■■□□□ 1.48
LINC01116-202ENST00000339037 NOS1P29475 1434 aa24.28■■□□□ 1.48
LINC01116-202ENST00000339037 FAM50AQ14320 339 aaKnown RBP24.27■■□□□ 1.48
LINC01116-202ENST00000339037 ADGRB3O60242 1522 aa24.25■■□□□ 1.47
LINC01116-202ENST00000339037 SLC52A1Q9NWF4 448 aa24.25■■□□□ 1.47
LINC01116-202ENST00000339037 ANKRD50Q9ULJ7 1429 aa24.25■■□□□ 1.47
LINC01116-202ENST00000339037 XIRP1Q702N8 1843 aaKnown RBP24.24■■□□□ 1.47
LINC01116-202ENST00000339037 TMEM94Q12767 1356 aa24.23■■□□□ 1.47
LINC01116-202ENST00000339037 RPRD2Q5VT52 1461 aaKnown RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms