RNA–Protein interactions for RNA: ENST00000323418.10

ME3-201, Transcript of malic enzyme 3, humanhuman

TSL 5 BASIC

Gene ME3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-201ENST00000323418 RNF17Q9BXT8 1623 aaKnown RBP33.57■■■□□ 2.96
ME3-201ENST00000323418 CROCC2H7BZ55 1655 aa33.55■■■□□ 2.96
ME3-201ENST00000323418 EIF2AK4Q9P2K8 1649 aaKnown RBP33.53■■■□□ 2.96
ME3-201ENST00000323418 KIF3BO15066 747 aa33.52■■■□□ 2.96
ME3-201ENST00000323418 PZPP20742 1482 aa33.5■■■□□ 2.95
ME3-201ENST00000323418 PLA2R1Q13018 1463 aa33.5■■■□□ 2.95
ME3-201ENST00000323418 LTBP4Q8N2S1 1624 aa33.5■■■□□ 2.95
ME3-201ENST00000323418 TSPY4P0CV99 314 aa33.49■■■□□ 2.95
ME3-201ENST00000323418 TSPY10P0CW01 314 aa33.49■■■□□ 2.95
ME3-201ENST00000323418 MROH1Q8NDA8 1641 aa33.49■■■□□ 2.95
ME3-201ENST00000323418 PTPN23Q9H3S7 1636 aa33.49■■■□□ 2.95
ME3-201ENST00000323418 DNMT1P26358 1616 aaKnown RBP33.48■■■□□ 2.95
ME3-201ENST00000323418 ZC3H13Q5T200 1668 aaKnown RBP33.46■■■□□ 2.95
ME3-201ENST00000323418 TCOF1Q13428 1488 aaKnown RBP33.46■■■□□ 2.95
ME3-201ENST00000323418 A2ML1A8K2U0 1454 aa33.45■■■□□ 2.95
ME3-201ENST00000323418 SHANK2Q9UPX8 1470 aa33.41■■■□□ 2.94
ME3-201ENST00000323418 ABCC3O15438 1527 aa33.4■■■□□ 2.94
ME3-201ENST00000323418 CEP152O94986 1710 aa33.39■■■□□ 2.94
ME3-201ENST00000323418 DUOX2Q9NRD8 1548 aa33.38■■■□□ 2.93
ME3-201ENST00000323418 ABCC5O15440 1437 aa33.38■■■□□ 2.93
ME3-201ENST00000323418 POLR1AO95602 1720 aaPredicted RBP33.38■■■□□ 2.93
ME3-201ENST00000323418 FBXO31Q5XUX0 539 aaPredicted RBP33.37■■■□□ 2.93
ME3-201ENST00000323418 TNRQ92752 1358 aa33.36■■■□□ 2.93
ME3-201ENST00000323418 NCKAP5LQ9HCH0 1330 aa33.36■■■□□ 2.93
ME3-201ENST00000323418 FGD6Q6ZV73 1430 aa33.36■■■□□ 2.93
ME3-201ENST00000323418 WASHC2CQ9Y4E1 1318 aa33.35■■■□□ 2.93
ME3-201ENST00000323418 SPATA31D1Q6ZQQ2 1576 aa33.32■■■□□ 2.92
ME3-201ENST00000323418 NEURL4Q96JN8 1562 aa33.31■■■□□ 2.92
ME3-201ENST00000323418 DAPK1P53355 1430 aa33.31■■■□□ 2.92
ME3-201ENST00000323418 PRDM15P57071 1507 aaPredicted RBP33.3■■■□□ 2.92
ME3-201ENST00000323418 APLP2Q06481 763 aa33.3■■■□□ 2.92
ME3-201ENST00000323418 PKD2Q13563 968 aa33.3■■■□□ 2.92
ME3-201ENST00000323418 DEPDC5O75140 1603 aa33.29■■■□□ 2.92
ME3-201ENST00000323418 IQSEC2Q5JU85 1478 aa33.29■■■□□ 2.92
ME3-201ENST00000323418 NLRP1Q9C000 1473 aa33.28■■■□□ 2.92
ME3-201ENST00000323418 KIF15Q9NS87 1388 aa33.26■■■□□ 2.92
ME3-201ENST00000323418 ERBINQ96RT1 1412 aa33.26■■■□□ 2.91
ME3-201ENST00000323418 CFAP65Q6ZU64 1925 aaKnown RBP33.24■■■□□ 2.91
ME3-201ENST00000323418 ERVK-7P63135 1459 aa33.23■■■□□ 2.91
ME3-201ENST00000323418 UGGT1Q9NYU2 1555 aa33.21■■■□□ 2.91
ME3-201ENST00000323418 ZNF335Q9H4Z2 1342 aaPredicted RBP33.2■■■□□ 2.91
ME3-201ENST00000323418 UBR1Q8IWV7 1749 aa33.15■■■□□ 2.9
ME3-201ENST00000323418 RRP7BPQ9NSQ0 103 aa33.14■■■□□ 2.9
ME3-201ENST00000323418 VWDEQ8N2E2 1590 aa33.13■■■□□ 2.89
ME3-201ENST00000323418 ADGRL2O95490 1459 aa33.13■■■□□ 2.89
ME3-201ENST00000323418 ARHGAP31Q2M1Z3 1444 aa33.13■■■□□ 2.89
ME3-201ENST00000323418 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.13■■■□□ 2.89
ME3-201ENST00000323418 MED14O60244 1454 aa33.11■■■□□ 2.89
ME3-201ENST00000323418 ANKRD30AQ9BXX3 1397 aa33.08■■■□□ 2.89
ME3-201ENST00000323418 LMTK2Q8IWU2 1503 aa33.07■■■□□ 2.89
ME3-201ENST00000323418 IQGAP1P46940 1657 aa33.07■■■□□ 2.89
ME3-201ENST00000323418 THEMISQ8N1K5 641 aaPredicted RBP33.07■■■□□ 2.88
ME3-201ENST00000323418 CHIC2Q9UKJ5 165 aa33.03■■■□□ 2.88
ME3-201ENST00000323418 ANKLE2Q86XL3 938 aa33.01■■■□□ 2.87
ME3-201ENST00000323418 NPHP4O75161 1426 aaPredicted RBP33.01■■■□□ 2.87
ME3-201ENST00000323418 CPS1P31327 1500 aa33■■■□□ 2.87
ME3-201ENST00000323418 PIK3C2BO00750 1634 aa32.99■■■□□ 2.87
ME3-201ENST00000323418 STRCP1A6NGW2 1772 aa32.98■■■□□ 2.87
ME3-201ENST00000323418 ARHGAP23Q9P227 1491 aa32.97■■■□□ 2.87
ME3-201ENST00000323418 EFCAB6Q5THR3 1501 aa32.97■■■□□ 2.87
ME3-201ENST00000323418 KDM5AP29375 1690 aaKnown RBP32.96■■■□□ 2.87
ME3-201ENST00000323418 SLIT1O75093 1534 aa32.96■■■□□ 2.87
ME3-201ENST00000323418 SYNMO15061 1565 aa32.95■■■□□ 2.86
ME3-201ENST00000323418 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.94■■■□□ 2.86
ME3-201ENST00000323418 KANK1Q14678 1352 aa32.94■■■□□ 2.86
ME3-201ENST00000323418 FAM50AQ14320 339 aaKnown RBP32.91■■■□□ 2.86
ME3-201ENST00000323418 SCAF11Q99590 1463 aaKnown RBP32.89■■■□□ 2.86
ME3-201ENST00000323418 ANKRD50Q9ULJ7 1429 aa32.88■■■□□ 2.85
ME3-201ENST00000323418 UNC13BO14795 1591 aa32.87■■■□□ 2.85
ME3-201ENST00000323418 NOS1P29475 1434 aa32.87■■■□□ 2.85
ME3-201ENST00000323418 TET3O43151 1660 aa32.85■■■□□ 2.85
ME3-201ENST00000323418 ALKQ9UM73 1620 aa32.84■■■□□ 2.85
ME3-201ENST00000323418 GCC2Q8IWJ2 1684 aa32.83■■■□□ 2.85
ME3-201ENST00000323418 UBAP1LF5GYI3 381 aa32.83■■■□□ 2.85
ME3-201ENST00000323418 LTKP29376 864 aa32.8■■■□□ 2.84
ME3-201ENST00000323418 RPRD2Q5VT52 1461 aaKnown RBP32.79■■■□□ 2.84
ME3-201ENST00000323418 ADGRB3O60242 1522 aa32.78■■■□□ 2.84
ME3-201ENST00000323418 ROCK1Q13464 1354 aa32.77■■■□□ 2.84
ME3-201ENST00000323418 TMEM2Q9UHN6 1383 aa32.77■■■□□ 2.84
ME3-201ENST00000323418 MYO5BQ9ULV0 1848 aa32.77■■■□□ 2.84
ME3-201ENST00000323418 LRRC7Q96NW7 1537 aa32.77■■■□□ 2.84
ME3-201ENST00000323418 XIRP1Q702N8 1843 aaKnown RBP32.76■■■□□ 2.83
ME3-201ENST00000323418 IDI1Q13907 227 aa32.75■■■□□ 2.83
ME3-201ENST00000323418 IQGAP3Q86VI3 1631 aa32.73■■■□□ 2.83
ME3-201ENST00000323418 E9PCH4 1651 aa32.73■■■□□ 2.83
ME3-201ENST00000323418 TXNDC2Q86VQ3 553 aa32.72■■■□□ 2.83
ME3-201ENST00000323418 TMEM131LA2VDJ0 1609 aa32.66■■■□□ 2.82
ME3-201ENST00000323418 DISP3Q9P2K9 1392 aa32.65■■■□□ 2.82
ME3-201ENST00000323418 EID1Q9Y6B2 187 aa32.63■■■□□ 2.81
ME3-201ENST00000323418 TOM1O60784 492 aa32.62■■■□□ 2.81
ME3-201ENST00000323418 PPARGC1BQ86YN6 1023 aaKnown RBP32.62■■■□□ 2.81
ME3-201ENST00000323418 SLC52A1Q9NWF4 448 aa32.62■■■□□ 2.81
ME3-201ENST00000323418 STAG3Q9UJ98 1225 aa32.61■■■□□ 2.81
ME3-201ENST00000323418 ZFYVE9O95405 1425 aa32.59■■■□□ 2.81
ME3-201ENST00000323418 PIP4K2BP78356 416 aa32.56■■■□□ 2.8
ME3-201ENST00000323418 RRBP1Q9P2E9 1410 aaKnown RBP32.56■■■□□ 2.8
ME3-201ENST00000323418 NWD1Q149M9 1564 aa32.56■■■□□ 2.8
ME3-201ENST00000323418 HSPA1LP34931 641 aa32.54■■■□□ 2.8
ME3-201ENST00000323418 ILDR2Q71H61 639 aa32.53■■■□□ 2.8
ME3-201ENST00000323418 SCAF1Q9H7N4 1312 aaKnown RBP32.51■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms