RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 DUOX2Q9NRD8 1548 aa21.83■■□□□ 1.09
SMARCD2-202ENST00000323347 DHX29Q7Z478 1369 aaKnown RBP21.82■■□□□ 1.08
SMARCD2-202ENST00000323347 ARAP3Q8WWN8 1544 aa21.81■■□□□ 1.08
SMARCD2-202ENST00000323347 ROCK2O75116 1388 aaKnown RBP21.81■■□□□ 1.08
SMARCD2-202ENST00000323347 ATP10AO60312 1499 aa21.81■■□□□ 1.08
SMARCD2-202ENST00000323347 FKBP8Q14318 412 aa21.8■■□□□ 1.08
SMARCD2-202ENST00000323347 ERBINQ96RT1 1412 aa21.8■■□□□ 1.08
SMARCD2-202ENST00000323347 HNRNPUQ00839 825 aaKnown RBP eCLIP21.79■■□□□ 1.08
SMARCD2-202ENST00000323347 PLA2R1Q13018 1463 aa21.79■■□□□ 1.08
SMARCD2-202ENST00000323347 CCDC184Q52MB2 194 aa21.78■■□□□ 1.08
SMARCD2-202ENST00000323347 ABCC1P33527 1531 aa21.77■■□□□ 1.08
SMARCD2-202ENST00000323347 NEFLP07196 543 aa21.77■■□□□ 1.08
SMARCD2-202ENST00000323347 EFCAB2Q5VUJ9 269 aa21.77■■□□□ 1.08
SMARCD2-202ENST00000323347 CCDC144AA2RUR9 1427 aa21.76■■□□□ 1.07
SMARCD2-202ENST00000323347 CARD11Q9BXL7 1154 aa21.74■■□□□ 1.07
SMARCD2-202ENST00000323347 ZNF326Q5BKZ1 582 aaKnown RBP21.74■■□□□ 1.07
SMARCD2-202ENST00000323347 PRAG1Q86YV5 1406 aa21.73■■□□□ 1.07
SMARCD2-202ENST00000323347 RTEL1-TNFRSF6BF6WH68 1400 aa21.73■■□□□ 1.07
SMARCD2-202ENST00000323347 DCAF11Q8TEB1 546 aa21.72■■□□□ 1.07
SMARCD2-202ENST00000323347 TRPM1Q7Z4N2 1603 aa21.72■■□□□ 1.07
SMARCD2-202ENST00000323347 MRS2Q9HD23 443 aa21.72■■□□□ 1.07
SMARCD2-202ENST00000323347 GPRASP1Q5JY77 1395 aa21.72■■□□□ 1.07
SMARCD2-202ENST00000323347 LAMC1P11047 1609 aa21.71■■□□□ 1.07
SMARCD2-202ENST00000323347 ZBED9Q6R2W3 1325 aa21.69■■□□□ 1.06
SMARCD2-202ENST00000323347 TRAPPC8Q9Y2L5 1435 aa21.68■■□□□ 1.06
SMARCD2-202ENST00000323347 A2MP01023 1474 aa21.68■■□□□ 1.06
SMARCD2-202ENST00000323347 TSHZ2Q9NRE2 1034 aa21.66■■□□□ 1.06
SMARCD2-202ENST00000323347 KDM2AQ9Y2K7 1162 aa21.66■■□□□ 1.06
SMARCD2-202ENST00000323347 KTN1Q86UP2 1357 aaKnown RBP21.66■■□□□ 1.06
SMARCD2-202ENST00000323347 ST20-MTHFSA0A0A6YYL1 179 aa21.65■■□□□ 1.06
SMARCD2-202ENST00000323347 ERICH6BQ5W0A0 696 aa21.65■■□□□ 1.06
SMARCD2-202ENST00000323347 E9PCH4 1651 aa21.65■■□□□ 1.06
SMARCD2-202ENST00000323347 WDR7Q9Y4E6 1490 aa21.63■■□□□ 1.05
SMARCD2-202ENST00000323347 EIF2AK4Q9P2K8 1649 aaKnown RBP21.63■■□□□ 1.05
SMARCD2-202ENST00000323347 ZFYVE16Q7Z3T8 1539 aa21.62■■□□□ 1.05
SMARCD2-202ENST00000323347 FAM9BQ8IZU0 186 aa21.62■■□□□ 1.05
SMARCD2-202ENST00000323347 PRDM15P57071 1507 aaPredicted RBP21.61■■□□□ 1.05
SMARCD2-202ENST00000323347 BCANQ96GW7 911 aa21.61■■□□□ 1.05
SMARCD2-202ENST00000323347 ABCA9Q8IUA7 1624 aa21.61■■□□□ 1.05
SMARCD2-202ENST00000323347 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.61■■□□□ 1.051e-7■■■■□ 21.5
SMARCD2-202ENST00000323347 DEPDC5O75140 1603 aa21.59■■□□□ 1.05
SMARCD2-202ENST00000323347 SPAG9O60271 1321 aaKnown RBP21.59■■□□□ 1.05
SMARCD2-202ENST00000323347 PTPRTO14522 1441 aa21.57■■□□□ 1.04
SMARCD2-202ENST00000323347 INO80Q9ULG1 1556 aaPredicted RBP21.56■■□□□ 1.04
SMARCD2-202ENST00000323347 RALBP1Q15311 655 aa21.55■■□□□ 1.04
SMARCD2-202ENST00000323347 STAC3Q96MF2 364 aa21.55■■□□□ 1.04
SMARCD2-202ENST00000323347 VWDEQ8N2E2 1590 aa21.54■■□□□ 1.04
SMARCD2-202ENST00000323347 TRPM2O94759 1503 aa21.54■■□□□ 1.04
SMARCD2-202ENST00000323347 RNF17Q9BXT8 1623 aaKnown RBP21.54■■□□□ 1.04
SMARCD2-202ENST00000323347 NBPF1Q3BBV0 1214 aa21.53■■□□□ 1.04
SMARCD2-202ENST00000323347 PNISRQ8TF01 805 aaKnown RBP21.53■■□□□ 1.04
SMARCD2-202ENST00000323347 COL17A1Q9UMD9 1497 aaPredicted RBP21.53■■□□□ 1.04
SMARCD2-202ENST00000323347 BRD4O60885 1362 aaPredicted RBP21.53■■□□□ 1.04
SMARCD2-202ENST00000323347 RGL3Q3MIN7 710 aa21.53■■□□□ 1.04
SMARCD2-202ENST00000323347 POLR3GLQ9BT43 218 aa21.53■■□□□ 1.04
SMARCD2-202ENST00000323347 FANCAO15360 1455 aa21.52■■□□□ 1.04
SMARCD2-202ENST00000323347 ATP7AQ04656 1500 aa21.51■■□□□ 1.03
SMARCD2-202ENST00000323347 AFAP1Q8N556 730 aa21.51■■□□□ 1.03
SMARCD2-202ENST00000323347 NEURL4Q96JN8 1562 aa21.51■■□□□ 1.03
SMARCD2-202ENST00000323347 SMG6Q86US8 1419 aaKnown RBP21.51■■□□□ 1.03
SMARCD2-202ENST00000323347 TESK2Q96S53 571 aa21.51■■□□□ 1.03
SMARCD2-202ENST00000323347 LRPPRCP42704 1394 aaKnown RBP21.5■■□□□ 1.03
SMARCD2-202ENST00000323347 TET3O43151 1660 aa21.5■■□□□ 1.03
SMARCD2-202ENST00000323347 WASHC2CQ9Y4E1 1318 aa21.5■■□□□ 1.03
SMARCD2-202ENST00000323347 MYBBP1AQ9BQG0 1328 aaKnown RBP21.49■■□□□ 1.03
SMARCD2-202ENST00000323347 CEP152O94986 1710 aa21.47■■□□□ 1.03
SMARCD2-202ENST00000323347 SPHKAPQ2M3C7 1700 aa21.47■■□□□ 1.03
SMARCD2-202ENST00000323347 PER1O15534 1290 aaPredicted RBP21.47■■□□□ 1.03
SMARCD2-202ENST00000323347 PARD3Q8TEW0 1356 aa21.47■■□□□ 1.03
SMARCD2-202ENST00000323347 MADDQ8WXG6 1647 aa21.46■■□□□ 1.03
SMARCD2-202ENST00000323347 ASXL2Q76L83 1435 aa21.45■■□□□ 1.02
SMARCD2-202ENST00000323347 TMC1Q8TDI8 760 aa21.45■■□□□ 1.02
SMARCD2-202ENST00000323347 ADGRL1O94910 1474 aa21.44■■□□□ 1.02
SMARCD2-202ENST00000323347 SCAPERQ9BY12 1400 aa21.44■■□□□ 1.02
SMARCD2-202ENST00000323347 KANK1Q14678 1352 aa21.43■■□□□ 1.02
SMARCD2-202ENST00000323347 CLTCL1P53675 1640 aa21.42■■□□□ 1.02
SMARCD2-202ENST00000323347 PPP4R2Q9NY27 417 aa21.42■■□□□ 1.02
SMARCD2-202ENST00000323347 MROH1Q8NDA8 1641 aa21.42■■□□□ 1.02
SMARCD2-202ENST00000323347 DISP3Q9P2K9 1392 aa21.42■■□□□ 1.02
SMARCD2-202ENST00000323347 RNF123Q5XPI4 1314 aa21.41■■□□□ 1.02
SMARCD2-202ENST00000323347 IQGAP1P46940 1657 aa21.41■■□□□ 1.02
SMARCD2-202ENST00000323347 INSRP06213 1382 aa21.4■■□□□ 1.02
SMARCD2-202ENST00000323347 NUDCQ9Y266 331 aa21.4■■□□□ 1.02
SMARCD2-202ENST00000323347 TMF1P82094 1093 aa21.39■■□□□ 1.02
SMARCD2-202ENST00000323347 ILDR1Q86SU0 546 aaPredicted RBP21.39■■□□□ 1.01
SMARCD2-202ENST00000323347 NLRP13Q86W25 1043 aa21.39■■□□□ 1.01
SMARCD2-202ENST00000323347 ZMYM4Q5VZL5 1548 aa21.38■■□□□ 1.01
SMARCD2-202ENST00000323347 LMTK2Q8IWU2 1503 aa21.38■■□□□ 1.01
SMARCD2-202ENST00000323347 KIAA1210Q9ULL0 1709 aa21.37■■□□□ 1.01
SMARCD2-202ENST00000323347 KIDINS220Q9ULH0 1771 aa21.36■■□□□ 1.01
SMARCD2-202ENST00000323347 IRX6P78412 446 aaPredicted RBP21.35■■□□□ 1.01
SMARCD2-202ENST00000323347 KIF13AQ9H1H9 1805 aa21.35■■□□□ 1.01
SMARCD2-202ENST00000323347 SCAF11Q99590 1463 aaKnown RBP21.34■■□□□ 1.01
SMARCD2-202ENST00000323347 ZNF518AQ6AHZ1 1483 aa21.34■■□□□ 1.01
SMARCD2-202ENST00000323347 CFAP74Q9C0B2 1584 aa21.32■■□□□ 1
SMARCD2-202ENST00000323347 MYOM2P54296 1465 aa21.32■■□□□ 1
SMARCD2-202ENST00000323347 KIF3BO15066 747 aa21.32■■□□□ 1
SMARCD2-202ENST00000323347 EFCAB6Q5THR3 1501 aa21.32■■□□□ 1
SMARCD2-202ENST00000323347 CNGB1Q14028 1251 aaPredicted RBP21.3■■□□□ 1
SMARCD2-202ENST00000323347 PANK3Q9H999 370 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms