RNA–Protein interactions for RNA: ENST00000300954.9

PCSK4-201, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCSK4, Length 2,661 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-201ENST00000300954 DCAF11Q8TEB1 546 aa22.62■■□□□ 1.21
PCSK4-201ENST00000300954 CCDC144AA2RUR9 1427 aa22.62■■□□□ 1.21
PCSK4-201ENST00000300954 DHX29Q7Z478 1369 aaKnown RBP22.61■■□□□ 1.21
PCSK4-201ENST00000300954 KDM2AQ9Y2K7 1162 aa22.6■■□□□ 1.21
PCSK4-201ENST00000300954 CARD11Q9BXL7 1154 aa22.6■■□□□ 1.21
PCSK4-201ENST00000300954 ATP10AO60312 1499 aa22.59■■□□□ 1.21
PCSK4-201ENST00000300954 TRPM1Q7Z4N2 1603 aa22.58■■□□□ 1.21
PCSK4-201ENST00000300954 HNRNPUQ00839 825 aaKnown RBP eCLIP22.58■■□□□ 1.21
PCSK4-201ENST00000300954 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.58■■□□□ 1.21
PCSK4-201ENST00000300954 PRAG1Q86YV5 1406 aa22.57■■□□□ 1.2
PCSK4-201ENST00000300954 WDR7Q9Y4E6 1490 aa22.57■■□□□ 1.2
PCSK4-201ENST00000300954 RTEL1-TNFRSF6BF6WH68 1400 aa22.56■■□□□ 1.2
PCSK4-201ENST00000300954 FKBP8Q14318 412 aa22.55■■□□□ 1.2
PCSK4-201ENST00000300954 A2MP01023 1474 aa22.54■■□□□ 1.2
PCSK4-201ENST00000300954 ABCA9Q8IUA7 1624 aa22.54■■□□□ 1.2
PCSK4-201ENST00000300954 ZFYVE16Q7Z3T8 1539 aa22.54■■□□□ 1.2
PCSK4-201ENST00000300954 ROCK2O75116 1388 aaKnown RBP22.52■■□□□ 1.2
PCSK4-201ENST00000300954 MRS2Q9HD23 443 aa22.52■■□□□ 1.2
PCSK4-201ENST00000300954 ST20-MTHFSA0A0A6YYL1 179 aa22.51■■□□□ 1.19
PCSK4-201ENST00000300954 AFAP1Q8N556 730 aa22.49■■□□□ 1.19
PCSK4-201ENST00000300954 SPAG9O60271 1321 aaKnown RBP22.49■■□□□ 1.19
PCSK4-201ENST00000300954 LAMC1P11047 1609 aa22.48■■□□□ 1.19
PCSK4-201ENST00000300954 GPRASP1Q5JY77 1395 aa22.48■■□□□ 1.19
PCSK4-201ENST00000300954 RGL3Q3MIN7 710 aa22.47■■□□□ 1.19
PCSK4-201ENST00000300954 DEPDC5O75140 1603 aa22.47■■□□□ 1.19
PCSK4-201ENST00000300954 INO80Q9ULG1 1556 aaPredicted RBP22.47■■□□□ 1.19
PCSK4-201ENST00000300954 FANCAO15360 1455 aa22.47■■□□□ 1.19
PCSK4-201ENST00000300954 E9PCH4 1651 aa22.47■■□□□ 1.19
PCSK4-201ENST00000300954 POLR3GLQ9BT43 218 aa22.46■■□□□ 1.19
PCSK4-201ENST00000300954 FAM9BQ8IZU0 186 aa22.45■■□□□ 1.19
PCSK4-201ENST00000300954 NEFLP07196 543 aa22.45■■□□□ 1.18
PCSK4-201ENST00000300954 BCANQ96GW7 911 aa22.44■■□□□ 1.18
PCSK4-201ENST00000300954 PRDM15P57071 1507 aaPredicted RBP22.43■■□□□ 1.18
PCSK4-201ENST00000300954 ATP7AQ04656 1500 aa22.43■■□□□ 1.18
PCSK4-201ENST00000300954 EIF2AK4Q9P2K8 1649 aaKnown RBP22.43■■□□□ 1.18
PCSK4-201ENST00000300954 NBPF1Q3BBV0 1214 aa22.43■■□□□ 1.18
PCSK4-201ENST00000300954 ASXL2Q76L83 1435 aa22.42■■□□□ 1.18
PCSK4-201ENST00000300954 ZBED9Q6R2W3 1325 aa22.4■■□□□ 1.18
PCSK4-201ENST00000300954 VWDEQ8N2E2 1590 aa22.39■■□□□ 1.18
PCSK4-201ENST00000300954 TRPM2O94759 1503 aa22.39■■□□□ 1.17
PCSK4-201ENST00000300954 PTPRTO14522 1441 aa22.38■■□□□ 1.17
PCSK4-201ENST00000300954 ADGRL1O94910 1474 aa22.38■■□□□ 1.17
PCSK4-201ENST00000300954 TET3O43151 1660 aa22.37■■□□□ 1.17
PCSK4-201ENST00000300954 SPHKAPQ2M3C7 1700 aa22.37■■□□□ 1.17
PCSK4-201ENST00000300954 RNF17Q9BXT8 1623 aaKnown RBP22.37■■□□□ 1.17
PCSK4-201ENST00000300954 SCAPERQ9BY12 1400 aa22.37■■□□□ 1.17
PCSK4-201ENST00000300954 CEP152O94986 1710 aa22.36■■□□□ 1.17
PCSK4-201ENST00000300954 COL17A1Q9UMD9 1497 aaPredicted RBP22.33■■□□□ 1.17
PCSK4-201ENST00000300954 CLTCL1P53675 1640 aa22.33■■□□□ 1.16
PCSK4-201ENST00000300954 MROH1Q8NDA8 1641 aa22.33■■□□□ 1.16
PCSK4-201ENST00000300954 MADDQ8WXG6 1647 aa22.33■■□□□ 1.16
PCSK4-201ENST00000300954 TESK2Q96S53 571 aa22.33■■□□□ 1.16
PCSK4-201ENST00000300954 TSHZ2Q9NRE2 1034 aa22.32■■□□□ 1.16
PCSK4-201ENST00000300954 KTN1Q86UP2 1357 aaKnown RBP22.32■■□□□ 1.16
PCSK4-201ENST00000300954 OSCARQ8IYS5 282 aa22.31■■□□□ 1.16
PCSK4-201ENST00000300954 KIDINS220Q9ULH0 1771 aa22.3■■□□□ 1.16
PCSK4-201ENST00000300954 CNGB1Q14028 1251 aaPredicted RBP22.3■■□□□ 1.16
PCSK4-201ENST00000300954 PNISRQ8TF01 805 aaKnown RBP22.28■■□□□ 1.16
PCSK4-201ENST00000300954 DISP3Q9P2K9 1392 aa22.28■■□□□ 1.16
PCSK4-201ENST00000300954 KANK1Q14678 1352 aa22.28■■□□□ 1.16
PCSK4-201ENST00000300954 RALBP1Q15311 655 aa22.27■■□□□ 1.16
PCSK4-201ENST00000300954 KIF3BO15066 747 aa22.26■■□□□ 1.15
PCSK4-201ENST00000300954 NEURL4Q96JN8 1562 aa22.26■■□□□ 1.15
PCSK4-201ENST00000300954 IQGAP1P46940 1657 aa22.25■■□□□ 1.15
PCSK4-201ENST00000300954 PER1O15534 1290 aaPredicted RBP22.25■■□□□ 1.15
PCSK4-201ENST00000300954 MYBBP1AQ9BQG0 1328 aaKnown RBP22.25■■□□□ 1.15
PCSK4-201ENST00000300954 BRD4O60885 1362 aaPredicted RBP22.25■■□□□ 1.15
PCSK4-201ENST00000300954 STAC3Q96MF2 364 aa22.24■■□□□ 1.15
PCSK4-201ENST00000300954 ZNF518AQ6AHZ1 1483 aa22.24■■□□□ 1.15
PCSK4-201ENST00000300954 LRPPRCP42704 1394 aaKnown RBP22.23■■□□□ 1.15
PCSK4-201ENST00000300954 PARD3Q8TEW0 1356 aa22.23■■□□□ 1.15
PCSK4-201ENST00000300954 TMC1Q8TDI8 760 aa22.23■■□□□ 1.15
PCSK4-201ENST00000300954 NPM1P06748 294 aaKnown RBP eCLIP22.21■■□□□ 1.15
PCSK4-201ENST00000300954 CFAP74Q9C0B2 1584 aa22.21■■□□□ 1.15
PCSK4-201ENST00000300954 ERICH6BQ5W0A0 696 aa22.2■■□□□ 1.14
PCSK4-201ENST00000300954 MYT1LQ9UL68 1186 aa22.2■■□□□ 1.14
PCSK4-201ENST00000300954 EFCAB6Q5THR3 1501 aa22.2■■□□□ 1.14
PCSK4-201ENST00000300954 SMG6Q86US8 1419 aaKnown RBP22.19■■□□□ 1.14
PCSK4-201ENST00000300954 IRX6P78412 446 aaPredicted RBP22.19■■□□□ 1.14
PCSK4-201ENST00000300954 LMTK2Q8IWU2 1503 aa22.19■■□□□ 1.14
PCSK4-201ENST00000300954 TMF1P82094 1093 aa22.19■■□□□ 1.14
PCSK4-201ENST00000300954 CD109Q6YHK3 1445 aa22.18■■□□□ 1.14
PCSK4-201ENST00000300954 MYT1Q01538 1121 aa22.18■■□□□ 1.14
PCSK4-201ENST00000300954 KIAA1210Q9ULL0 1709 aa22.18■■□□□ 1.14
PCSK4-201ENST00000300954 WASHC2CQ9Y4E1 1318 aa22.18■■□□□ 1.14
PCSK4-201ENST00000300954 PPRC1Q5VV67 1664 aaKnown RBP22.17■■□□□ 1.14
PCSK4-201ENST00000300954 POGZQ7Z3K3 1410 aa22.16■■□□□ 1.14
PCSK4-201ENST00000300954 UGGT1Q9NYU2 1555 aa22.16■■□□□ 1.14
PCSK4-201ENST00000300954 SCAF11Q99590 1463 aaKnown RBP22.15■■□□□ 1.14
PCSK4-201ENST00000300954 MLH3Q9UHC1 1453 aa22.15■■□□□ 1.14
PCSK4-201ENST00000300954 FRMPD1Q5SYB0 1578 aa22.14■■□□□ 1.13
PCSK4-201ENST00000300954 KIF1BO60333 1816 aa22.13■■□□□ 1.13
PCSK4-201ENST00000300954 IFT172Q9UG01 1749 aa22.13■■□□□ 1.13
PCSK4-201ENST00000300954 NLRP13Q86W25 1043 aa22.13■■□□□ 1.13
PCSK4-201ENST00000300954 PANK3Q9H999 370 aa22.13■■□□□ 1.13
PCSK4-201ENST00000300954 MYOM2P54296 1465 aa22.12■■□□□ 1.13
PCSK4-201ENST00000300954 MAP3K4Q9Y6R4 1608 aa22.12■■□□□ 1.13
PCSK4-201ENST00000300954 NUDCQ9Y266 331 aa22.11■■□□□ 1.13
PCSK4-201ENST00000300954 HECW2Q9P2P5 1572 aa22.11■■□□□ 1.13
PCSK4-201ENST00000300954 MROH2AA6NES4 1674 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms