RNA–Protein interactions for RNA: ENST00000300954.9

PCSK4-201, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCSK4, Length 2,661 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-201ENST00000300954 NISCHQ9Y2I1 1504 aa35.2■■■■□ 3.22
PCSK4-201ENST00000300954 CCDC180Q9P1Z9 1646 aa30.23■■■□□ 2.43
PCSK4-201ENST00000300954 ZCCHC6Q5VYS8 1495 aaKnown RBP29.72■■■□□ 2.35
PCSK4-201ENST00000300954 SHROOM4Q9ULL8 1493 aa29.4■■■□□ 2.3
PCSK4-201ENST00000300954 DCAF1Q9Y4B6 1507 aa29.03■■■□□ 2.24
PCSK4-201ENST00000300954 DCAF8L2P0C7V8 631 aa28.89■■■□□ 2.22
PCSK4-201ENST00000300954 SUPT5HO00267 1087 aaKnown RBP28.66■■■□□ 2.18
PCSK4-201ENST00000300954 MYO15BQ96JP2 1530 aa28.36■■■□□ 2.13
PCSK4-201ENST00000300954 SCRIBQ14160 1630 aa28.04■■■□□ 2.08
PCSK4-201ENST00000300954 ABCC9O60706 1549 aa28.01■■■□□ 2.08
PCSK4-201ENST00000300954 NACADO15069 1562 aa27.97■■■□□ 2.07
PCSK4-201ENST00000300954 CHIC1Q5VXU3 224 aa27.85■■■□□ 2.05
PCSK4-201ENST00000300954 RSF1Q96T23 1441 aaPredicted RBP27.66■■■□□ 2.02
PCSK4-201ENST00000300954 RB1CC1Q8TDY2 1594 aa27.55■■■□□ 2
PCSK4-201ENST00000300954 CECR2Q9BXF3 1484 aa27.38■■□□□ 1.97
PCSK4-201ENST00000300954 MROH2BQ7Z745 1585 aa27.29■■□□□ 1.96
PCSK4-201ENST00000300954 UNC13AQ9UPW8 1703 aa27.17■■□□□ 1.94
PCSK4-201ENST00000300954 WIZO95785 1651 aa27.12■■□□□ 1.93
PCSK4-201ENST00000300954 BAZ1AQ9NRL2 1556 aaPredicted RBP27.06■■□□□ 1.92
PCSK4-201ENST00000300954 SMARCA4P51532 1647 aa26.89■■□□□ 1.9
PCSK4-201ENST00000300954 LOC105371045A0A1W2PR82 267 aa26.89■■□□□ 1.89
PCSK4-201ENST00000300954 BICRAQ9NZM4 1560 aa26.84■■□□□ 1.89
PCSK4-201ENST00000300954 TRIM41Q8WV44 630 aa26.82■■□□□ 1.88
PCSK4-201ENST00000300954 TOP2AP11388 1531 aaKnown RBP26.76■■□□□ 1.87
PCSK4-201ENST00000300954 EIF4G1Q04637 1599 aaKnown RBP26.72■■□□□ 1.87
PCSK4-201ENST00000300954 PABPN1Q86U42 306 aaKnown RBP eCLIP26.63■■□□□ 1.85
PCSK4-201ENST00000300954 SMARCA2P51531 1590 aa26.58■■□□□ 1.85
PCSK4-201ENST00000300954 CCDC88BA6NC98 1476 aa26.57■■□□□ 1.84
PCSK4-201ENST00000300954 PEG3Q9GZU2 1588 aa26.5■■□□□ 1.83
PCSK4-201ENST00000300954 PCGF6Q9BYE7 350 aa26.45■■□□□ 1.82
PCSK4-201ENST00000300954 FAM9AQ8IZU1 332 aaPredicted RBP26.43■■□□□ 1.82
PCSK4-201ENST00000300954 ABCC8Q09428 1581 aa26.31■■□□□ 1.8
PCSK4-201ENST00000300954 HRCP23327 699 aa26.31■■□□□ 1.8
PCSK4-201ENST00000300954 ATAD2BQ9ULI0 1458 aa26.26■■□□□ 1.79
PCSK4-201ENST00000300954 TRIM26Q12899 539 aaPredicted RBP26.17■■□□□ 1.78
PCSK4-201ENST00000300954 BAZ1BQ9UIG0 1483 aaKnown RBP26.12■■□□□ 1.77
PCSK4-201ENST00000300954 EHMT2Q96KQ7 1210 aa26.1■■□□□ 1.77
PCSK4-201ENST00000300954 SOGA1O94964 1423 aa25.98■■□□□ 1.75
PCSK4-201ENST00000300954 WRNQ14191 1432 aaPredicted RBP eCLIP25.96■■□□□ 1.75
PCSK4-201ENST00000300954 EEA1Q15075 1411 aa25.92■■□□□ 1.74
PCSK4-201ENST00000300954 SYNJ1O43426 1573 aa25.88■■□□□ 1.73
PCSK4-201ENST00000300954 RUSC2Q8N2Y8 1516 aa25.88■■□□□ 1.73
PCSK4-201ENST00000300954 HMGXB3Q12766 1538 aa25.86■■□□□ 1.73
PCSK4-201ENST00000300954 NCAPD3P42695 1498 aa25.86■■□□□ 1.73
PCSK4-201ENST00000300954 CSRNP3Q8WYN3 585 aa25.81■■□□□ 1.72
PCSK4-201ENST00000300954 TNIKQ9UKE5 1360 aa25.76■■□□□ 1.71
PCSK4-201ENST00000300954 CEP162Q5TB80 1403 aa25.71■■□□□ 1.71
PCSK4-201ENST00000300954 PPARGC1BQ86YN6 1023 aaKnown RBP25.69■■□□□ 1.7
PCSK4-201ENST00000300954 GOLGA3Q08378 1498 aa25.66■■□□□ 1.7
PCSK4-201ENST00000300954 TOP2BQ02880 1626 aa25.66■■□□□ 1.7
PCSK4-201ENST00000300954 BIVM-ERCC5R4GMW8 1640 aa25.62■■□□□ 1.69
PCSK4-201ENST00000300954 KIF21BO75037 1637 aa25.61■■□□□ 1.69
PCSK4-201ENST00000300954 CEP164Q9UPV0 1460 aa25.57■■□□□ 1.68
PCSK4-201ENST00000300954 UBTFP17480 764 aaKnown RBP25.55■■□□□ 1.68
PCSK4-201ENST00000300954 CFTRP13569 1480 aa25.53■■□□□ 1.68
PCSK4-201ENST00000300954 ZEB1P37275 1124 aaPredicted RBP25.46■■□□□ 1.67
PCSK4-201ENST00000300954 CUX1P39880 1505 aa25.44■■□□□ 1.66
PCSK4-201ENST00000300954 PRDM2Q13029 1718 aa25.41■■□□□ 1.66
PCSK4-201ENST00000300954 RAPGEF2Q9Y4G8 1499 aa25.39■■□□□ 1.66
PCSK4-201ENST00000300954 CC2D2AQ9P2K1 1620 aa25.35■■□□□ 1.65
PCSK4-201ENST00000300954 CLIP1P30622 1438 aa25.3■■□□□ 1.64
PCSK4-201ENST00000300954 PRXQ9BXM0 1461 aa25.28■■□□□ 1.64
PCSK4-201ENST00000300954 ERICH3Q5RHP9 1530 aa25.27■■□□□ 1.64
PCSK4-201ENST00000300954 CADPSQ9ULU8 1353 aa25.27■■□□□ 1.64
PCSK4-201ENST00000300954 KIF27Q86VH2 1401 aa25.2■■□□□ 1.62
PCSK4-201ENST00000300954 VPS8Q8N3P4 1428 aa25.19■■□□□ 1.62
PCSK4-201ENST00000300954 TTBK1Q5TCY1 1321 aaPredicted RBP25.18■■□□□ 1.62
PCSK4-201ENST00000300954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.09■■□□□ 1.61
PCSK4-201ENST00000300954 FGD5Q6ZNL6 1462 aa25.02■■□□□ 1.6
PCSK4-201ENST00000300954 ARAP1Q96P48 1450 aa25■■□□□ 1.59
PCSK4-201ENST00000300954 FANCD2Q9BXW9 1451 aa25■■□□□ 1.59
PCSK4-201ENST00000300954 CCER1Q8TC90 406 aaPredicted RBP25■■□□□ 1.59
PCSK4-201ENST00000300954 CUX2O14529 1486 aa25■■□□□ 1.59
PCSK4-201ENST00000300954 RANGAP1P46060 587 aaPredicted RBP24.99■■□□□ 1.59
PCSK4-201ENST00000300954 IGF1RP08069 1367 aa24.97■■□□□ 1.59
PCSK4-201ENST00000300954 APLP2Q06481 763 aa24.9■■□□□ 1.58
PCSK4-201ENST00000300954 DNMBPQ6XZF7 1577 aa24.9■■□□□ 1.58
PCSK4-201ENST00000300954 NESP48681 1621 aa24.89■■□□□ 1.58
PCSK4-201ENST00000300954 ARHGAP35Q9NRY4 1499 aa24.85■■□□□ 1.57
PCSK4-201ENST00000300954 TOPBP1Q92547 1522 aa24.83■■□□□ 1.57
PCSK4-201ENST00000300954 CARMIL1Q5VZK9 1371 aa24.83■■□□□ 1.56
PCSK4-201ENST00000300954 LAMC3Q9Y6N6 1575 aa24.82■■□□□ 1.56
PCSK4-201ENST00000300954 ABCA10Q8WWZ4 1543 aa24.79■■□□□ 1.56
PCSK4-201ENST00000300954 POLA1P09884 1462 aaPredicted RBP24.78■■□□□ 1.56
PCSK4-201ENST00000300954 RAD54L2Q9Y4B4 1467 aa24.76■■□□□ 1.55
PCSK4-201ENST00000300954 HNRNPUL2Q1KMD3 747 aaKnown RBP24.72■■□□□ 1.55
PCSK4-201ENST00000300954 KANK4Q5T7N3 995 aaPredicted RBP24.71■■□□□ 1.55
PCSK4-201ENST00000300954 URB2Q14146 1524 aaKnown RBP24.69■■□□□ 1.54
PCSK4-201ENST00000300954 WDR97A6NE52 1622 aa24.66■■□□□ 1.54
PCSK4-201ENST00000300954 DNAJC5BQ9UF47 199 aa24.64■■□□□ 1.54
PCSK4-201ENST00000300954 CUL7Q14999 1698 aa24.62■■□□□ 1.53
PCSK4-201ENST00000300954 PDS5BQ9NTI5 1447 aa24.59■■□□□ 1.53
PCSK4-201ENST00000300954 RRBP1Q9P2E9 1410 aaKnown RBP24.59■■□□□ 1.53
PCSK4-201ENST00000300954 MAP3K1Q13233 1512 aa24.58■■□□□ 1.53
PCSK4-201ENST00000300954 KIF21AQ7Z4S6 1674 aa24.56■■□□□ 1.52
PCSK4-201ENST00000300954 ABCA5Q8WWZ7 1642 aa24.54■■□□□ 1.52
PCSK4-201ENST00000300954 TIAM1Q13009 1591 aa24.54■■□□□ 1.52
PCSK4-201ENST00000300954 CTTNBP2Q8WZ74 1663 aa24.5■■□□□ 1.51
PCSK4-201ENST00000300954 FHAD1B1AJZ9 1412 aa24.47■■□□□ 1.51
PCSK4-201ENST00000300954 EFCAB5A4FU69 1503 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms