RNA–Protein interactions for RNA: ENST00000281047.3

MSGN1-201, Transcript of mesogenin 1, humanhuman

APPRIS P1 BASIC

Gene MSGN1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1-201ENST00000281047 NCOA1Q15788 1441 aa30.23■■■□□ 2.43
MSGN1-201ENST00000281047 FGD6Q6ZV73 1430 aa30.23■■■□□ 2.43
MSGN1-201ENST00000281047 SHANK2Q9UPX8 1470 aa30.22■■■□□ 2.43
MSGN1-201ENST00000281047 PTPRTO14522 1441 aa30.22■■■□□ 2.43
MSGN1-201ENST00000281047 ZNF142P52746 1687 aaPredicted RBP30.21■■■□□ 2.43
MSGN1-201ENST00000281047 CAMSAP1Q5T5Y3 1602 aa30.2■■■□□ 2.43
MSGN1-201ENST00000281047 EIF2AK4Q9P2K8 1649 aaKnown RBP30.2■■■□□ 2.43
MSGN1-201ENST00000281047 PZPP20742 1482 aa30.19■■■□□ 2.42
MSGN1-201ENST00000281047 TCOF1Q13428 1488 aaKnown RBP30.19■■■□□ 2.42
MSGN1-201ENST00000281047 ABCC5O15440 1437 aa30.19■■■□□ 2.42
MSGN1-201ENST00000281047 CEP170BQ9Y4F5 1589 aaPredicted RBP30.19■■■□□ 2.42
MSGN1-201ENST00000281047 RNF17Q9BXT8 1623 aaKnown RBP30.18■■■□□ 2.42
MSGN1-201ENST00000281047 DUOX2Q9NRD8 1548 aa30.18■■■□□ 2.42
MSGN1-201ENST00000281047 CERKQ8TCT0 537 aa30.17■■■□□ 2.42
MSGN1-201ENST00000281047 CROCC2H7BZ55 1655 aa30.17■■■□□ 2.42
MSGN1-201ENST00000281047 DAPK1P53355 1430 aa30.16■■■□□ 2.42
MSGN1-201ENST00000281047 TNRQ92752 1358 aa30.15■■■□□ 2.42
MSGN1-201ENST00000281047 KIF15Q9NS87 1388 aa30.15■■■□□ 2.42
MSGN1-201ENST00000281047 DNMT1P26358 1616 aaKnown RBP30.14■■■□□ 2.42
MSGN1-201ENST00000281047 A2ML1A8K2U0 1454 aa30.13■■■□□ 2.41
MSGN1-201ENST00000281047 PLA2R1Q13018 1463 aa30.13■■■□□ 2.41
MSGN1-201ENST00000281047 FBXO31Q5XUX0 539 aaPredicted RBP30.12■■■□□ 2.41
MSGN1-201ENST00000281047 ZC3H13Q5T200 1668 aaKnown RBP30.11■■■□□ 2.41
MSGN1-201ENST00000281047 ERBINQ96RT1 1412 aa30.1■■■□□ 2.41
MSGN1-201ENST00000281047 ABCC3O15438 1527 aa30.1■■■□□ 2.41
MSGN1-201ENST00000281047 PKD2Q13563 968 aa30.09■■■□□ 2.41
MSGN1-201ENST00000281047 RRP7BPQ9NSQ0 103 aa30.09■■■□□ 2.41
MSGN1-201ENST00000281047 NCKAP5LQ9HCH0 1330 aa30.07■■■□□ 2.4
MSGN1-201ENST00000281047 MROH1Q8NDA8 1641 aa30.06■■■□□ 2.4
MSGN1-201ENST00000281047 ANKRD30AQ9BXX3 1397 aa30.05■■■□□ 2.4
MSGN1-201ENST00000281047 NLRP1Q9C000 1473 aa30.03■■■□□ 2.4
MSGN1-201ENST00000281047 CHIC2Q9UKJ5 165 aa30.02■■■□□ 2.4
MSGN1-201ENST00000281047 FAM50AQ14320 339 aaKnown RBP30.01■■■□□ 2.39
MSGN1-201ENST00000281047 PRDM15P57071 1507 aaPredicted RBP30■■■□□ 2.39
MSGN1-201ENST00000281047 SPATA31D1Q6ZQQ2 1576 aa29.97■■■□□ 2.39
MSGN1-201ENST00000281047 CEP152O94986 1710 aa29.96■■■□□ 2.39
MSGN1-201ENST00000281047 ERVK-7P63135 1459 aa29.95■■■□□ 2.39
MSGN1-201ENST00000281047 KANK1Q14678 1352 aa29.95■■■□□ 2.39
MSGN1-201ENST00000281047 THEMISQ8N1K5 641 aaPredicted RBP29.95■■■□□ 2.39
MSGN1-201ENST00000281047 ADGRL2O95490 1459 aa29.94■■■□□ 2.38
MSGN1-201ENST00000281047 LTBP4Q8N2S1 1624 aa29.94■■■□□ 2.38
MSGN1-201ENST00000281047 UGGT1Q9NYU2 1555 aa29.94■■■□□ 2.38
MSGN1-201ENST00000281047 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.93■■■□□ 2.38
MSGN1-201ENST00000281047 DEPDC5O75140 1603 aa29.93■■■□□ 2.38
MSGN1-201ENST00000281047 ARHGAP31Q2M1Z3 1444 aa29.91■■■□□ 2.38
MSGN1-201ENST00000281047 ANKLE2Q86XL3 938 aa29.89■■■□□ 2.38
MSGN1-201ENST00000281047 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.89■■■□□ 2.37
MSGN1-201ENST00000281047 POLR1AO95602 1720 aaPredicted RBP29.88■■■□□ 2.37
MSGN1-201ENST00000281047 IQSEC2Q5JU85 1478 aa29.87■■■□□ 2.37
MSGN1-201ENST00000281047 ZNF335Q9H4Z2 1342 aaPredicted RBP29.87■■■□□ 2.37
MSGN1-201ENST00000281047 NEURL4Q96JN8 1562 aa29.83■■■□□ 2.37
MSGN1-201ENST00000281047 LMTK2Q8IWU2 1503 aa29.83■■■□□ 2.37
MSGN1-201ENST00000281047 ANKRD50Q9ULJ7 1429 aa29.82■■■□□ 2.36
MSGN1-201ENST00000281047 VWDEQ8N2E2 1590 aa29.81■■■□□ 2.36
MSGN1-201ENST00000281047 CFAP65Q6ZU64 1925 aaKnown RBP29.78■■■□□ 2.36
MSGN1-201ENST00000281047 MED14O60244 1454 aa29.77■■■□□ 2.36
MSGN1-201ENST00000281047 NPHP4O75161 1426 aaPredicted RBP29.77■■■□□ 2.36
MSGN1-201ENST00000281047 PPARGC1BQ86YN6 1023 aaKnown RBP29.75■■■□□ 2.35
MSGN1-201ENST00000281047 ROCK1Q13464 1354 aa29.75■■■□□ 2.35
MSGN1-201ENST00000281047 UBR1Q8IWV7 1749 aa29.74■■■□□ 2.35
MSGN1-201ENST00000281047 EFCAB6Q5THR3 1501 aa29.72■■■□□ 2.35
MSGN1-201ENST00000281047 IQGAP1P46940 1657 aa29.69■■■□□ 2.34
MSGN1-201ENST00000281047 CPS1P31327 1500 aa29.68■■■□□ 2.34
MSGN1-201ENST00000281047 STAG3Q9UJ98 1225 aa29.67■■■□□ 2.34
MSGN1-201ENST00000281047 SLIT1O75093 1534 aa29.66■■■□□ 2.34
MSGN1-201ENST00000281047 PIK3C2BO00750 1634 aa29.66■■■□□ 2.34
MSGN1-201ENST00000281047 RPRD2Q5VT52 1461 aaKnown RBP29.66■■■□□ 2.34
MSGN1-201ENST00000281047 SCAF11Q99590 1463 aaKnown RBP29.66■■■□□ 2.34
MSGN1-201ENST00000281047 ARHGAP23Q9P227 1491 aa29.66■■■□□ 2.34
MSGN1-201ENST00000281047 NOS1P29475 1434 aa29.65■■■□□ 2.34
MSGN1-201ENST00000281047 ITGAEP38570 1179 aa29.65■■■□□ 2.34
MSGN1-201ENST00000281047 EID1Q9Y6B2 187 aa29.63■■■□□ 2.33
MSGN1-201ENST00000281047 UNC13BO14795 1591 aa29.63■■■□□ 2.33
MSGN1-201ENST00000281047 SYNMO15061 1565 aa29.62■■■□□ 2.33
MSGN1-201ENST00000281047 UBAP1LF5GYI3 381 aa29.62■■■□□ 2.33
MSGN1-201ENST00000281047 IDI1Q13907 227 aa29.62■■■□□ 2.33
MSGN1-201ENST00000281047 TXNDC2Q86VQ3 553 aa29.62■■■□□ 2.33
MSGN1-201ENST00000281047 TET3O43151 1660 aa29.61■■■□□ 2.33
MSGN1-201ENST00000281047 KDM5AP29375 1690 aaKnown RBP29.61■■■□□ 2.33
MSGN1-201ENST00000281047 SLC52A1Q9NWF4 448 aa29.6■■■□□ 2.33
MSGN1-201ENST00000281047 TMEM2Q9UHN6 1383 aa29.6■■■□□ 2.33
MSGN1-201ENST00000281047 LTKP29376 864 aa29.59■■■□□ 2.33
MSGN1-201ENST00000281047 RRBP1Q9P2E9 1410 aaKnown RBP29.55■■■□□ 2.32
MSGN1-201ENST00000281047 GCC2Q8IWJ2 1684 aa29.55■■■□□ 2.32
MSGN1-201ENST00000281047 ADGRB3O60242 1522 aa29.55■■■□□ 2.32
MSGN1-201ENST00000281047 IQGAP3Q86VI3 1631 aa29.51■■■□□ 2.31
MSGN1-201ENST00000281047 NUP155O75694 1391 aa29.51■■■□□ 2.31
MSGN1-201ENST00000281047 TOM1O60784 492 aa29.49■■■□□ 2.31
MSGN1-201ENST00000281047 E9PCH4 1651 aa29.45■■■□□ 2.31
MSGN1-201ENST00000281047 LRRC7Q96NW7 1537 aa29.43■■■□□ 2.3
MSGN1-201ENST00000281047 STRCP1A6NGW2 1772 aa29.43■■■□□ 2.3
MSGN1-201ENST00000281047 SCAF1Q9H7N4 1312 aaKnown RBP29.41■■■□□ 2.3
MSGN1-201ENST00000281047 HDGFP51858 240 aaKnown RBP29.4■■■□□ 2.3
MSGN1-201ENST00000281047 PIP4K2BP78356 416 aa29.39■■■□□ 2.3
MSGN1-201ENST00000281047 TMEM131LA2VDJ0 1609 aa29.38■■■□□ 2.29
MSGN1-201ENST00000281047 CHGAP10645 457 aaKnown RBP29.37■■■□□ 2.29
MSGN1-201ENST00000281047 ZFYVE9O95405 1425 aa29.37■■■□□ 2.29
MSGN1-201ENST00000281047 BCANQ96GW7 911 aa29.36■■■□□ 2.29
MSGN1-201ENST00000281047 RIMS2Q9UQ26 1411 aa29.36■■■□□ 2.29
MSGN1-201ENST00000281047 PPP1R15AO75807 674 aaPredicted RBP29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms