RNA–Protein interactions for RNA: ENST00000245923.8

RTN2-201, Transcript of reticulon 2, humanhuman

TSL 1 (best) BASIC

Gene RTN2, Length 2,293 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-201ENST00000245923 DCAF11Q8TEB1 546 aa36.17■■■■□ 3.38
RTN2-201ENST00000245923 ROCK2O75116 1388 aaKnown RBP36.16■■■■□ 3.38
RTN2-201ENST00000245923 CCDC144AA2RUR9 1427 aa36.16■■■■□ 3.38
RTN2-201ENST00000245923 TSHZ2Q9NRE2 1034 aa36.15■■■■□ 3.38
RTN2-201ENST00000245923 MAGI2Q86UL8 1455 aa36.14■■■■□ 3.38
RTN2-201ENST00000245923 PLA2R1Q13018 1463 aa36.14■■■■□ 3.38
RTN2-201ENST00000245923 KDM2AQ9Y2K7 1162 aa36.13■■■■□ 3.37
RTN2-201ENST00000245923 ERBINQ96RT1 1412 aa36.12■■■■□ 3.37
RTN2-201ENST00000245923 ABCC1P33527 1531 aa36.12■■■■□ 3.37
RTN2-201ENST00000245923 TRPM1Q7Z4N2 1603 aa36.12■■■■□ 3.37
RTN2-201ENST00000245923 FAM9BQ8IZU0 186 aa36.1■■■■□ 3.37
RTN2-201ENST00000245923 EFCAB2Q5VUJ9 269 aa36.09■■■■□ 3.37
RTN2-201ENST00000245923 PRAG1Q86YV5 1406 aa36.08■■■■□ 3.37
RTN2-201ENST00000245923 ZBED9Q6R2W3 1325 aa36.06■■■■□ 3.36
RTN2-201ENST00000245923 ATP10AO60312 1499 aa36.06■■■■□ 3.36
RTN2-201ENST00000245923 ARAP3Q8WWN8 1544 aa36.04■■■■□ 3.36
RTN2-201ENST00000245923 ST20-MTHFSA0A0A6YYL1 179 aa36.03■■■■□ 3.36
RTN2-201ENST00000245923 POLR3GLQ9BT43 218 aa36.03■■■■□ 3.36
RTN2-201ENST00000245923 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.03■■■■□ 3.36
RTN2-201ENST00000245923 E9PCH4 1651 aa36.01■■■■□ 3.35
RTN2-201ENST00000245923 A2MP01023 1474 aa36■■■■□ 3.35
RTN2-201ENST00000245923 LAMC1P11047 1609 aa36■■■■□ 3.35
RTN2-201ENST00000245923 TRAPPC8Q9Y2L5 1435 aa35.98■■■■□ 3.35
RTN2-201ENST00000245923 GPRASP1Q5JY77 1395 aa35.96■■■■□ 3.35
RTN2-201ENST00000245923 RTEL1-TNFRSF6BF6WH68 1400 aa35.92■■■■□ 3.34
RTN2-201ENST00000245923 EIF2AK4Q9P2K8 1649 aaKnown RBP35.92■■■■□ 3.34
RTN2-201ENST00000245923 RGL3Q3MIN7 710 aa35.9■■■■□ 3.34
RTN2-201ENST00000245923 ERICH6BQ5W0A0 696 aa35.88■■■■□ 3.34
RTN2-201ENST00000245923 PRDM15P57071 1507 aaPredicted RBP35.88■■■■□ 3.33
RTN2-201ENST00000245923 ZFYVE16Q7Z3T8 1539 aa35.88■■■■□ 3.33
RTN2-201ENST00000245923 KTN1Q86UP2 1357 aaKnown RBP35.87■■■■□ 3.33
RTN2-201ENST00000245923 WDR7Q9Y4E6 1490 aa35.85■■■■□ 3.33
RTN2-201ENST00000245923 SPAG9O60271 1321 aaKnown RBP35.84■■■■□ 3.33
RTN2-201ENST00000245923 NBPF1Q3BBV0 1214 aa35.82■■■■□ 3.33
RTN2-201ENST00000245923 ABCA9Q8IUA7 1624 aa35.82■■■■□ 3.32
RTN2-201ENST00000245923 DEPDC5O75140 1603 aa35.81■■■■□ 3.32
RTN2-201ENST00000245923 CNGB1Q14028 1251 aaPredicted RBP35.78■■■■□ 3.32
RTN2-201ENST00000245923 PNISRQ8TF01 805 aaKnown RBP35.77■■■■□ 3.32
RTN2-201ENST00000245923 RNF17Q9BXT8 1623 aaKnown RBP35.77■■■■□ 3.32
RTN2-201ENST00000245923 RALBP1Q15311 655 aa35.77■■■■□ 3.32
RTN2-201ENST00000245923 COL17A1Q9UMD9 1497 aaPredicted RBP35.76■■■■□ 3.32
RTN2-201ENST00000245923 IRX6P78412 446 aaPredicted RBP35.76■■■■□ 3.32
RTN2-201ENST00000245923 INO80Q9ULG1 1556 aaPredicted RBP35.76■■■■□ 3.31
RTN2-201ENST00000245923 AFAP1Q8N556 730 aa35.75■■■■□ 3.31
RTN2-201ENST00000245923 BRD4O60885 1362 aaPredicted RBP35.74■■■■□ 3.31
RTN2-201ENST00000245923 SMG6Q86US8 1419 aaKnown RBP35.74■■■■□ 3.31
RTN2-201ENST00000245923 TRPM2O94759 1503 aa35.74■■■■□ 3.31
RTN2-201ENST00000245923 MYBBP1AQ9BQG0 1328 aaKnown RBP35.73■■■■□ 3.31
RTN2-201ENST00000245923 TMC1Q8TDI8 760 aa35.73■■■■□ 3.31
RTN2-201ENST00000245923 FANCAO15360 1455 aa35.72■■■■□ 3.31
RTN2-201ENST00000245923 SPHKAPQ2M3C7 1700 aa35.72■■■■□ 3.31
RTN2-201ENST00000245923 ATP7AQ04656 1500 aa35.71■■■■□ 3.31
RTN2-201ENST00000245923 CEP152O94986 1710 aa35.7■■■■□ 3.31
RTN2-201ENST00000245923 TESK2Q96S53 571 aa35.69■■■■□ 3.3
RTN2-201ENST00000245923 TET3O43151 1660 aa35.69■■■■□ 3.3
RTN2-201ENST00000245923 LRPPRCP42704 1394 aaKnown RBP35.69■■■■□ 3.3
RTN2-201ENST00000245923 PTPRTO14522 1441 aa35.68■■■■□ 3.3
RTN2-201ENST00000245923 VWDEQ8N2E2 1590 aa35.66■■■■□ 3.3
RTN2-201ENST00000245923 MADDQ8WXG6 1647 aa35.66■■■■□ 3.3
RTN2-201ENST00000245923 PPP4R2Q9NY27 417 aa35.66■■■■□ 3.3
RTN2-201ENST00000245923 PARD3Q8TEW0 1356 aa35.64■■■■□ 3.3
RTN2-201ENST00000245923 DISP3Q9P2K9 1392 aa35.63■■■■□ 3.29
RTN2-201ENST00000245923 PER1O15534 1290 aaPredicted RBP35.62■■■■□ 3.29
RTN2-201ENST00000245923 CLTCL1P53675 1640 aa35.61■■■■□ 3.29
RTN2-201ENST00000245923 ADGRL1O94910 1474 aa35.6■■■■□ 3.29
RTN2-201ENST00000245923 NUDCQ9Y266 331 aa35.6■■■■□ 3.29
RTN2-201ENST00000245923 WASHC2CQ9Y4E1 1318 aa35.59■■■■□ 3.29
RTN2-201ENST00000245923 IQGAP1P46940 1657 aa35.59■■■■□ 3.29
RTN2-201ENST00000245923 STAC3Q96MF2 364 aa35.58■■■■□ 3.29
RTN2-201ENST00000245923 ASXL2Q76L83 1435 aa35.57■■■■□ 3.29
RTN2-201ENST00000245923 SCAPERQ9BY12 1400 aa35.56■■■■□ 3.28
RTN2-201ENST00000245923 KANK1Q14678 1352 aa35.56■■■■□ 3.28
RTN2-201ENST00000245923 TMF1P82094 1093 aa35.55■■■■□ 3.28
RTN2-201ENST00000245923 MYT1Q01538 1121 aa35.54■■■■□ 3.28
RTN2-201ENST00000245923 NLRP13Q86W25 1043 aa35.54■■■■□ 3.28
RTN2-201ENST00000245923 NEURL4Q96JN8 1562 aa35.53■■■■□ 3.28
RTN2-201ENST00000245923 RBM19Q9Y4C8 960 aaKnown RBP35.53■■■■□ 3.28
RTN2-201ENST00000245923 MROH1Q8NDA8 1641 aa35.53■■■■□ 3.28
RTN2-201ENST00000245923 RNF123Q5XPI4 1314 aa35.51■■■■□ 3.28
RTN2-201ENST00000245923 KIDINS220Q9ULH0 1771 aa35.46■■■■□ 3.27
RTN2-201ENST00000245923 KIAA1210Q9ULL0 1709 aa35.45■■■■□ 3.27
RTN2-201ENST00000245923 KIF3BO15066 747 aa35.45■■■■□ 3.27
RTN2-201ENST00000245923 PANK3Q9H999 370 aa35.44■■■■□ 3.26
RTN2-201ENST00000245923 SCAF11Q99590 1463 aaKnown RBP35.42■■■■□ 3.26
RTN2-201ENST00000245923 EFCAB6Q5THR3 1501 aa35.39■■■■□ 3.26
RTN2-201ENST00000245923 MYT1LQ9UL68 1186 aa35.38■■■■□ 3.25
RTN2-201ENST00000245923 INSRP06213 1382 aa35.37■■■■□ 3.25
RTN2-201ENST00000245923 ZNF518AQ6AHZ1 1483 aa35.37■■■■□ 3.25
RTN2-201ENST00000245923 ZMYM4Q5VZL5 1548 aa35.37■■■■□ 3.25
RTN2-201ENST00000245923 KIF1BO60333 1816 aa35.35■■■■□ 3.25
RTN2-201ENST00000245923 LMTK2Q8IWU2 1503 aa35.34■■■■□ 3.25
RTN2-201ENST00000245923 CFAP74Q9C0B2 1584 aa35.34■■■■□ 3.25
RTN2-201ENST00000245923 B4GALNT3Q6L9W6 998 aa35.34■■■■□ 3.25
RTN2-201ENST00000245923 CC2D1BQ5T0F9 858 aaKnown RBP35.33■■■■□ 3.25
RTN2-201ENST00000245923 MYOM2P54296 1465 aa35.33■■■■□ 3.25
RTN2-201ENST00000245923 SYNMO15061 1565 aa35.32■■■■□ 3.24
RTN2-201ENST00000245923 MAP3K4Q9Y6R4 1608 aa35.31■■■■□ 3.24
RTN2-201ENST00000245923 PPRC1Q5VV67 1664 aaKnown RBP35.31■■■■□ 3.24
RTN2-201ENST00000245923 IFT172Q9UG01 1749 aa35.31■■■■□ 3.24
RTN2-201ENST00000245923 SENP3-EIF4A1A0A087X0R7 540 aa35.3■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms