RNA–Protein interactions for RNA: ENST00000245923.8
RTN2-201, Transcript of reticulon 2, human
Retrieved 6 of 6 RNA–protein pairs in 2.8 ms
RTN2-201, Transcript of reticulon 2, human
TSL 1 (best) BASIC
Gene RTN2, Length 2,293 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .
RNA | Protein | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Transcript Symbol | Ensembl Transcript ID | Gene | UniProt Accession | Length | Protein Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
RTN2-201 | ENST00000245923 | PCBP2 | Q15366 | 365 aa | Known RBP eCLIP | 25.99 | ■■□□□ 1.75 | 4e-15 | ■■■■□ 19.9 |
RTN2-201 | ENST00000245923 | LARP4 | Q71RC2 | 724 aa | Known RBP eCLIP | 26.31 | ■■□□□ 1.8 | 3e-11 | ■■■■■ 43.4 |
RTN2-201 | ENST00000245923 | SND1 | Q7KZF4 | 910 aa | Known RBP eCLIP | 28.71 | ■■■□□ 2.19 | 7e-8 | ■■□□□ 11.9 |
RTN2-201 | ENST00000245923 | PABPC4 | Q13310 | 644 aa | Known RBP eCLIP | 29.01 | ■■■□□ 2.24 | 7e-7 | ■■■■□ 24.8 |
RTN2-201 | ENST00000245923 | RBFOX2 | O43251 | 390 aa | Known RBP eCLIP | 21.81 | ■■□□□ 1.08 | 8e-7 | ■■■■□ 24.2 |
RTN2-201 | ENST00000245923 | PCBP1 | Q15365 | 356 aa | Known RBP eCLIP | 27.34 | ■■□□□ 1.97 | 2e-6 | ■■■■■ 32.7 |