RNA–Protein interactions for RNA: ENST00000229384.5

GATC-201, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-201ENST00000229384 CAMSAP1Q5T5Y3 1602 aa23.44■■□□□ 1.34
GATC-201ENST00000229384 KDM5DQ9BY66 1539 aa23.43■■□□□ 1.34
GATC-201ENST00000229384 PTPRTO14522 1441 aa23.42■■□□□ 1.34
GATC-201ENST00000229384 DMRT2Q9Y5R5 561 aa23.42■■□□□ 1.34
GATC-201ENST00000229384 CEP170BQ9Y4F5 1589 aaPredicted RBP23.42■■□□□ 1.34
GATC-201ENST00000229384 EIF2AK4Q9P2K8 1649 aaKnown RBP23.41■■□□□ 1.34
GATC-201ENST00000229384 APLP2Q06481 763 aa23.41■■□□□ 1.34
GATC-201ENST00000229384 ABCC5O15440 1437 aa23.4■■□□□ 1.34
GATC-201ENST00000229384 PZPP20742 1482 aa23.39■■□□□ 1.34
GATC-201ENST00000229384 CERKQ8TCT0 537 aa23.39■■□□□ 1.33
GATC-201ENST00000229384 MROH1Q8NDA8 1641 aa23.39■■□□□ 1.33
GATC-201ENST00000229384 TCOF1Q13428 1488 aaKnown RBP23.38■■□□□ 1.33
GATC-201ENST00000229384 FGD6Q6ZV73 1430 aa23.38■■□□□ 1.33
GATC-201ENST00000229384 DNMT1P26358 1616 aaKnown RBP23.37■■□□□ 1.33
GATC-201ENST00000229384 SHANK2Q9UPX8 1470 aa23.36■■□□□ 1.33
GATC-201ENST00000229384 FBXO31Q5XUX0 539 aaPredicted RBP23.36■■□□□ 1.33
GATC-201ENST00000229384 WASHC2CQ9Y4E1 1318 aa23.35■■□□□ 1.33
GATC-201ENST00000229384 PLA2R1Q13018 1463 aa23.35■■□□□ 1.33
GATC-201ENST00000229384 ZC3H13Q5T200 1668 aaKnown RBP23.35■■□□□ 1.33
GATC-201ENST00000229384 ABCC3O15438 1527 aa23.34■■□□□ 1.33
GATC-201ENST00000229384 DUOX2Q9NRD8 1548 aa23.34■■□□□ 1.33
GATC-201ENST00000229384 A2ML1A8K2U0 1454 aa23.34■■□□□ 1.33
GATC-201ENST00000229384 DAPK1P53355 1430 aa23.33■■□□□ 1.33
GATC-201ENST00000229384 CEP152O94986 1710 aa23.33■■□□□ 1.32
GATC-201ENST00000229384 LTBP4Q8N2S1 1624 aa23.33■■□□□ 1.32
GATC-201ENST00000229384 NCKAP5LQ9HCH0 1330 aa23.32■■□□□ 1.32
GATC-201ENST00000229384 TNRQ92752 1358 aa23.31■■□□□ 1.32
GATC-201ENST00000229384 CFAP65Q6ZU64 1925 aaKnown RBP23.29■■□□□ 1.32
GATC-201ENST00000229384 KIF15Q9NS87 1388 aa23.28■■□□□ 1.32
GATC-201ENST00000229384 PKD2Q13563 968 aa23.26■■□□□ 1.31
GATC-201ENST00000229384 RRP7BPQ9NSQ0 103 aa23.26■■□□□ 1.31
GATC-201ENST00000229384 SPATA31D1Q6ZQQ2 1576 aa23.26■■□□□ 1.31
GATC-201ENST00000229384 DEPDC5O75140 1603 aa23.26■■□□□ 1.31
GATC-201ENST00000229384 ERBINQ96RT1 1412 aa23.25■■□□□ 1.31
GATC-201ENST00000229384 PRDM15P57071 1507 aaPredicted RBP23.25■■□□□ 1.31
GATC-201ENST00000229384 POLR1AO95602 1720 aaPredicted RBP23.25■■□□□ 1.31
GATC-201ENST00000229384 NEURL4Q96JN8 1562 aa23.23■■□□□ 1.31
GATC-201ENST00000229384 NLRP1Q9C000 1473 aa23.22■■□□□ 1.31
GATC-201ENST00000229384 ERVK-7P63135 1459 aa23.21■■□□□ 1.31
GATC-201ENST00000229384 ADGRL2O95490 1459 aa23.19■■□□□ 1.3
GATC-201ENST00000229384 CHIC2Q9UKJ5 165 aa23.19■■□□□ 1.3
GATC-201ENST00000229384 UGGT1Q9NYU2 1555 aa23.18■■□□□ 1.3
GATC-201ENST00000229384 ANKRD30AQ9BXX3 1397 aa23.17■■□□□ 1.3
GATC-201ENST00000229384 VWDEQ8N2E2 1590 aa23.17■■□□□ 1.3
GATC-201ENST00000229384 ARHGAP31Q2M1Z3 1444 aa23.16■■□□□ 1.3
GATC-201ENST00000229384 ZNF335Q9H4Z2 1342 aaPredicted RBP23.16■■□□□ 1.3
GATC-201ENST00000229384 IQSEC2Q5JU85 1478 aa23.15■■□□□ 1.3
GATC-201ENST00000229384 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.14■■□□□ 1.3
GATC-201ENST00000229384 UBR1Q8IWV7 1749 aa23.14■■□□□ 1.3
GATC-201ENST00000229384 FAM50AQ14320 339 aaKnown RBP23.12■■□□□ 1.29
GATC-201ENST00000229384 THEMISQ8N1K5 641 aaPredicted RBP23.12■■□□□ 1.29
GATC-201ENST00000229384 LMTK2Q8IWU2 1503 aa23.12■■□□□ 1.29
GATC-201ENST00000229384 MED14O60244 1454 aa23.11■■□□□ 1.29
GATC-201ENST00000229384 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.1■■□□□ 1.29
GATC-201ENST00000229384 ANKLE2Q86XL3 938 aa23.08■■□□□ 1.29
GATC-201ENST00000229384 IQGAP1P46940 1657 aa23.06■■□□□ 1.28
GATC-201ENST00000229384 PIK3C2BO00750 1634 aa23.04■■□□□ 1.28
GATC-201ENST00000229384 KANK1Q14678 1352 aa23.04■■□□□ 1.28
GATC-201ENST00000229384 NPHP4O75161 1426 aaPredicted RBP23.04■■□□□ 1.28
GATC-201ENST00000229384 ANKRD50Q9ULJ7 1429 aa23.04■■□□□ 1.28
GATC-201ENST00000229384 EFCAB6Q5THR3 1501 aa23.03■■□□□ 1.28
GATC-201ENST00000229384 ARHGAP23Q9P227 1491 aa23.03■■□□□ 1.28
GATC-201ENST00000229384 SYNMO15061 1565 aa23.02■■□□□ 1.28
GATC-201ENST00000229384 STRCP1A6NGW2 1772 aa23.02■■□□□ 1.28
GATC-201ENST00000229384 PPARGC1BQ86YN6 1023 aaKnown RBP23.01■■□□□ 1.27
GATC-201ENST00000229384 SLIT1O75093 1534 aa23.01■■□□□ 1.27
GATC-201ENST00000229384 KDM5AP29375 1690 aaKnown RBP23■■□□□ 1.27
GATC-201ENST00000229384 NOS1P29475 1434 aa22.99■■□□□ 1.27
GATC-201ENST00000229384 UNC13BO14795 1591 aa22.99■■□□□ 1.27
GATC-201ENST00000229384 ROCK1Q13464 1354 aa22.98■■□□□ 1.27
GATC-201ENST00000229384 CPS1P31327 1500 aa22.98■■□□□ 1.27
GATC-201ENST00000229384 TET3O43151 1660 aa22.97■■□□□ 1.27
GATC-201ENST00000229384 LTKP29376 864 aa22.97■■□□□ 1.27
GATC-201ENST00000229384 SCAF11Q99590 1463 aaKnown RBP22.96■■□□□ 1.27
GATC-201ENST00000229384 IDI1Q13907 227 aa22.95■■□□□ 1.26
GATC-201ENST00000229384 GCC2Q8IWJ2 1684 aa22.95■■□□□ 1.26
GATC-201ENST00000229384 RPRD2Q5VT52 1461 aaKnown RBP22.92■■□□□ 1.26
GATC-201ENST00000229384 MYO5BQ9ULV0 1848 aa22.92■■□□□ 1.26
GATC-201ENST00000229384 TXNDC2Q86VQ3 553 aa22.91■■□□□ 1.26
GATC-201ENST00000229384 E9PCH4 1651 aa22.9■■□□□ 1.26
GATC-201ENST00000229384 TMEM2Q9UHN6 1383 aa22.9■■□□□ 1.26
GATC-201ENST00000229384 UBAP1LF5GYI3 381 aa22.9■■□□□ 1.26
GATC-201ENST00000229384 IQGAP3Q86VI3 1631 aa22.9■■□□□ 1.26
GATC-201ENST00000229384 ADGRB3O60242 1522 aa22.88■■□□□ 1.25
GATC-201ENST00000229384 ALKQ9UM73 1620 aa22.88■■□□□ 1.25
GATC-201ENST00000229384 RRBP1Q9P2E9 1410 aaKnown RBP22.86■■□□□ 1.25
GATC-201ENST00000229384 LRRC7Q96NW7 1537 aa22.86■■□□□ 1.25
GATC-201ENST00000229384 ITGAEP38570 1179 aa22.85■■□□□ 1.25
GATC-201ENST00000229384 SLC52A1Q9NWF4 448 aa22.85■■□□□ 1.25
GATC-201ENST00000229384 XIRP1Q702N8 1843 aaKnown RBP22.85■■□□□ 1.25
GATC-201ENST00000229384 TMEM131LA2VDJ0 1609 aa22.83■■□□□ 1.25
GATC-201ENST00000229384 STAG3Q9UJ98 1225 aa22.82■■□□□ 1.24
GATC-201ENST00000229384 EID1Q9Y6B2 187 aa22.82■■□□□ 1.24
GATC-201ENST00000229384 ZFYVE9O95405 1425 aa22.79■■□□□ 1.24
GATC-201ENST00000229384 NUP155O75694 1391 aa22.77■■□□□ 1.24
GATC-201ENST00000229384 TOM1O60784 492 aa22.76■■□□□ 1.23
GATC-201ENST00000229384 PIP4K2BP78356 416 aa22.72■■□□□ 1.23
GATC-201ENST00000229384 NAIPQ13075 1403 aa22.72■■□□□ 1.23
GATC-201ENST00000229384 SPHKAPQ2M3C7 1700 aa22.71■■□□□ 1.23
GATC-201ENST00000229384 SLC26A8Q96RN1 970 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms