RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 CPS1P31327 1500 aa18.66■□□□□ 0.58
SNU13-201ENST00000215956 TIAM1Q13009 1591 aa18.65■□□□□ 0.58
SNU13-201ENST00000215956 SCAF1Q9H7N4 1312 aaKnown RBP18.64■□□□□ 0.57
SNU13-201ENST00000215956 MTUS2Q5JR59 1369 aa18.64■□□□□ 0.57
SNU13-201ENST00000215956 MAP3K1Q13233 1512 aa18.64■□□□□ 0.57
SNU13-201ENST00000215956 HSPA1LP34931 641 aa18.63■□□□□ 0.57
SNU13-201ENST00000215956 PPARGC1BQ86YN6 1023 aaKnown RBP18.63■□□□□ 0.57
SNU13-201ENST00000215956 MBD5Q9P267 1494 aa18.62■□□□□ 0.57
SNU13-201ENST00000215956 PIP4K2BP78356 416 aa18.62■□□□□ 0.57
SNU13-201ENST00000215956 SHANK2Q9UPX8 1470 aa18.62■□□□□ 0.57
SNU13-201ENST00000215956 TOM1O60784 492 aa18.61■□□□□ 0.57
SNU13-201ENST00000215956 ZNF644Q9H582 1327 aaPredicted RBP18.61■□□□□ 0.57
SNU13-201ENST00000215956 TNRQ92752 1358 aa18.61■□□□□ 0.57
SNU13-201ENST00000215956 RTEL1-TNFRSF6BF6WH68 1400 aa18.61■□□□□ 0.57
SNU13-201ENST00000215956 KDM5DQ9BY66 1539 aa18.6■□□□□ 0.57
SNU13-201ENST00000215956 FAM135AQ9P2D6 1515 aa18.6■□□□□ 0.57
SNU13-201ENST00000215956 PZPP20742 1482 aa18.6■□□□□ 0.57
SNU13-201ENST00000215956 DHX29Q7Z478 1369 aaKnown RBP18.6■□□□□ 0.57
SNU13-201ENST00000215956 EHBP1L1Q8N3D4 1523 aa18.59■□□□□ 0.57
SNU13-201ENST00000215956 VWDEQ8N2E2 1590 aa18.58■□□□□ 0.56
SNU13-201ENST00000215956 FBXO31Q5XUX0 539 aaPredicted RBP18.57■□□□□ 0.56
SNU13-201ENST00000215956 DEPDC5O75140 1603 aa18.55■□□□□ 0.56
SNU13-201ENST00000215956 KIF3BO15066 747 aa18.55■□□□□ 0.56
SNU13-201ENST00000215956 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.55■□□□□ 0.56
SNU13-201ENST00000215956 CCDC141Q6ZP82 1450 aa18.54■□□□□ 0.56
SNU13-201ENST00000215956 ALKQ9UM73 1620 aa18.54■□□□□ 0.56
SNU13-201ENST00000215956 NLRP1Q9C000 1473 aa18.54■□□□□ 0.56
SNU13-201ENST00000215956 UGGT1Q9NYU2 1555 aa18.53■□□□□ 0.56
SNU13-201ENST00000215956 ANKLE2Q86XL3 938 aa18.53■□□□□ 0.56
SNU13-201ENST00000215956 IQGAP1P46940 1657 aa18.53■□□□□ 0.56
SNU13-201ENST00000215956 MED14O60244 1454 aa18.52■□□□□ 0.56
SNU13-201ENST00000215956 NPHP4O75161 1426 aaPredicted RBP18.52■□□□□ 0.56
SNU13-201ENST00000215956 WASHC2CQ9Y4E1 1318 aa18.51■□□□□ 0.55
SNU13-201ENST00000215956 MIA2Q96PC5 1412 aa18.51■□□□□ 0.55
SNU13-201ENST00000215956 CAMSAP2Q08AD1 1489 aa18.5■□□□□ 0.55
SNU13-201ENST00000215956 THEMISQ8N1K5 641 aaPredicted RBP18.5■□□□□ 0.55
SNU13-201ENST00000215956 STRCP1A6NGW2 1772 aa18.5■□□□□ 0.55
SNU13-201ENST00000215956 PHF23Q9BUL5 403 aaPredicted RBP18.49■□□□□ 0.55
SNU13-201ENST00000215956 SYNMO15061 1565 aa18.48■□□□□ 0.55
SNU13-201ENST00000215956 RNF17Q9BXT8 1623 aaKnown RBP18.47■□□□□ 0.55
SNU13-201ENST00000215956 ZC3H13Q5T200 1668 aaKnown RBP18.45■□□□□ 0.54
SNU13-201ENST00000215956 ARHGEF5Q12774 1597 aa18.45■□□□□ 0.54
SNU13-201ENST00000215956 NCOA2Q15596 1464 aa18.45■□□□□ 0.54
SNU13-201ENST00000215956 RSPH4AQ5TD94 716 aa18.45■□□□□ 0.54
SNU13-201ENST00000215956 LRRC7Q96NW7 1537 aa18.44■□□□□ 0.54
SNU13-201ENST00000215956 LRRC9Q6ZRR7 1453 aa18.43■□□□□ 0.54
SNU13-201ENST00000215956 KANK4Q5T7N3 995 aaPredicted RBP18.43■□□□□ 0.54
SNU13-201ENST00000215956 ABCC3O15438 1527 aa18.43■□□□□ 0.54
SNU13-201ENST00000215956 CFAP65Q6ZU64 1925 aaKnown RBP18.41■□□□□ 0.54
SNU13-201ENST00000215956 ERVK-7P63135 1459 aa18.4■□□□□ 0.54
SNU13-201ENST00000215956 HRCP23327 699 aa18.4■□□□□ 0.54
SNU13-201ENST00000215956 SENP3Q9H4L4 574 aaPredicted RBP18.4■□□□□ 0.54
SNU13-201ENST00000215956 UBR1Q8IWV7 1749 aa18.4■□□□□ 0.54
SNU13-201ENST00000215956 EIF2AK4Q9P2K8 1649 aaKnown RBP18.39■□□□□ 0.53
SNU13-201ENST00000215956 CEP152O94986 1710 aa18.38■□□□□ 0.53
SNU13-201ENST00000215956 TSPY4P0CV99 314 aa18.38■□□□□ 0.53
SNU13-201ENST00000215956 TSPY10P0CW01 314 aa18.38■□□□□ 0.53
SNU13-201ENST00000215956 MAST1Q9Y2H9 1570 aa18.38■□□□□ 0.53
SNU13-201ENST00000215956 MROH1Q8NDA8 1641 aa18.36■□□□□ 0.53
SNU13-201ENST00000215956 ZEB1P37275 1124 aaPredicted RBP18.36■□□□□ 0.53
SNU13-201ENST00000215956 RRBP1Q9P2E9 1410 aaKnown RBP18.36■□□□□ 0.53
SNU13-201ENST00000215956 XIRP1Q702N8 1843 aaKnown RBP18.36■□□□□ 0.53
SNU13-201ENST00000215956 SCAF11Q99590 1463 aaKnown RBP18.35■□□□□ 0.53
SNU13-201ENST00000215956 SLIT1O75093 1534 aa18.31■□□□□ 0.52
SNU13-201ENST00000215956 ARHGAP23Q9P227 1491 aa18.31■□□□□ 0.52
SNU13-201ENST00000215956 RGS17Q9UGC6 210 aaPredicted RBP18.29■□□□□ 0.52
SNU13-201ENST00000215956 LTKP29376 864 aa18.27■□□□□ 0.52
SNU13-201ENST00000215956 DUOX2Q9NRD8 1548 aa18.26■□□□□ 0.51
SNU13-201ENST00000215956 TXNDC2Q86VQ3 553 aa18.26■□□□□ 0.51
SNU13-201ENST00000215956 PRDM15P57071 1507 aaPredicted RBP18.26■□□□□ 0.51
SNU13-201ENST00000215956 PIK3C2BO00750 1634 aa18.25■□□□□ 0.51
SNU13-201ENST00000215956 ARHGAP31Q2M1Z3 1444 aa18.24■□□□□ 0.51
SNU13-201ENST00000215956 EID1Q9Y6B2 187 aa18.23■□□□□ 0.51
SNU13-201ENST00000215956 FAM135BQ49AJ0 1406 aa18.22■□□□□ 0.51
SNU13-201ENST00000215956 CROCC2H7BZ55 1655 aa18.21■□□□□ 0.51
SNU13-201ENST00000215956 KDM5AP29375 1690 aaKnown RBP18.21■□□□□ 0.51
SNU13-201ENST00000215956 ROBO1Q9Y6N7 1651 aa18.21■□□□□ 0.51
SNU13-201ENST00000215956 MYOM3Q5VTT5 1437 aa18.2■□□□□ 0.5
SNU13-201ENST00000215956 TMEM2Q9UHN6 1383 aa18.2■□□□□ 0.5
SNU13-201ENST00000215956 ERBINQ96RT1 1412 aa18.19■□□□□ 0.5
SNU13-201ENST00000215956 TMEM94Q12767 1356 aa18.18■□□□□ 0.5
SNU13-201ENST00000215956 KIF15Q9NS87 1388 aa18.18■□□□□ 0.5
SNU13-201ENST00000215956 POTEAQ6S8J7 498 aa18.17■□□□□ 0.5
SNU13-201ENST00000215956 EFCAB6Q5THR3 1501 aa18.17■□□□□ 0.5
SNU13-201ENST00000215956 CCER1Q8TC90 406 aaPredicted RBP18.16■□□□□ 0.5
SNU13-201ENST00000215956 STAG3Q9UJ98 1225 aa18.16■□□□□ 0.5
SNU13-201ENST00000215956 FGD6Q6ZV73 1430 aa18.15■□□□□ 0.5
SNU13-201ENST00000215956 TET3O43151 1660 aa18.14■□□□□ 0.5
SNU13-201ENST00000215956 SETD1AO15047 1707 aaKnown RBP18.14■□□□□ 0.49
SNU13-201ENST00000215956 NWD1Q149M9 1564 aa18.13■□□□□ 0.49
SNU13-201ENST00000215956 KCNA6P17658 529 aa18.13■□□□□ 0.49
SNU13-201ENST00000215956 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.12■□□□□ 0.49
SNU13-201ENST00000215956 NKTRP30414 1462 aaKnown RBP18.12■□□□□ 0.49
SNU13-201ENST00000215956 ABCC5O15440 1437 aa18.12■□□□□ 0.49
SNU13-201ENST00000215956 FAM50AQ14320 339 aaKnown RBP18.12■□□□□ 0.49
SNU13-201ENST00000215956 RRP7BPQ9NSQ0 103 aa18.12■□□□□ 0.49
SNU13-201ENST00000215956 KANK1Q14678 1352 aa18.12■□□□□ 0.49
SNU13-201ENST00000215956 LMTK2Q8IWU2 1503 aa18.11■□□□□ 0.49
SNU13-201ENST00000215956 PHLPP1O60346 1717 aa18.11■□□□□ 0.49
SNU13-201ENST00000215956 PTPN23Q9H3S7 1636 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms