RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 NISCHQ9Y2I1 1504 aa29.3■■■□□ 2.28
SNU13-201ENST00000215956 ABCC9O60706 1549 aa26.82■■□□□ 1.88
SNU13-201ENST00000215956 CCDC180Q9P1Z9 1646 aa26.51■■□□□ 1.83
SNU13-201ENST00000215956 DNAJC5BQ9UF47 199 aa25.44■■□□□ 1.66
SNU13-201ENST00000215956 RB1CC1Q8TDY2 1594 aa25.39■■□□□ 1.65
SNU13-201ENST00000215956 NACADO15069 1562 aa25.11■■□□□ 1.61
SNU13-201ENST00000215956 UNC13AQ9UPW8 1703 aa24.88■■□□□ 1.57
SNU13-201ENST00000215956 PABPN1Q86U42 306 aaKnown RBP eCLIP24.86■■□□□ 1.57
SNU13-201ENST00000215956 DCAF8L2P0C7V8 631 aa24.83■■□□□ 1.56
SNU13-201ENST00000215956 BICRAQ9NZM4 1560 aa24.66■■□□□ 1.54
SNU13-201ENST00000215956 MYO15BQ96JP2 1530 aa24.64■■□□□ 1.53
SNU13-201ENST00000215956 SHROOM4Q9ULL8 1493 aa24.29■■□□□ 1.48
SNU13-201ENST00000215956 CC2D2AQ9P2K1 1620 aa24.23■■□□□ 1.47
SNU13-201ENST00000215956 ZCCHC6Q5VYS8 1495 aaKnown RBP24.22■■□□□ 1.47
SNU13-201ENST00000215956 CECR2Q9BXF3 1484 aa24.19■■□□□ 1.46
SNU13-201ENST00000215956 DCAF1Q9Y4B6 1507 aa24.19■■□□□ 1.46
SNU13-201ENST00000215956 SCRIBQ14160 1630 aa24.11■■□□□ 1.45
SNU13-201ENST00000215956 EIF4G1Q04637 1599 aaKnown RBP24.09■■□□□ 1.45
SNU13-201ENST00000215956 DNAJC5Q9H3Z4 198 aa23.64■■□□□ 1.38
SNU13-201ENST00000215956 CUX2O14529 1486 aa23.28■■□□□ 1.32
SNU13-201ENST00000215956 ERCC6Q03468 1493 aa23.19■■□□□ 1.3
SNU13-201ENST00000215956 NCAPD3P42695 1498 aa23.16■■□□□ 1.3
SNU13-201ENST00000215956 ATAD2BQ9ULI0 1458 aa23.05■■□□□ 1.28
SNU13-201ENST00000215956 HMGXB3Q12766 1538 aa22.99■■□□□ 1.27
SNU13-201ENST00000215956 SMARCA2P51531 1590 aa22.98■■□□□ 1.27
SNU13-201ENST00000215956 SMARCA4P51532 1647 aa22.96■■□□□ 1.27
SNU13-201ENST00000215956 NESP48681 1621 aa22.93■■□□□ 1.26
SNU13-201ENST00000215956 THOC2Q8NI27 1593 aaKnown RBP22.82■■□□□ 1.24
SNU13-201ENST00000215956 BAZ1BQ9UIG0 1483 aaKnown RBP22.82■■□□□ 1.24
SNU13-201ENST00000215956 BAZ1AQ9NRL2 1556 aaPredicted RBP22.78■■□□□ 1.24
SNU13-201ENST00000215956 PEG3Q9GZU2 1588 aa22.74■■□□□ 1.23
SNU13-201ENST00000215956 LAMC3Q9Y6N6 1575 aa22.74■■□□□ 1.23
SNU13-201ENST00000215956 KIF21AQ7Z4S6 1674 aa22.68■■□□□ 1.22
SNU13-201ENST00000215956 PDS5BQ9NTI5 1447 aa22.58■■□□□ 1.21
SNU13-201ENST00000215956 MROH2BQ7Z745 1585 aa22.57■■□□□ 1.2
SNU13-201ENST00000215956 TRIM41Q8WV44 630 aa22.46■■□□□ 1.19
SNU13-201ENST00000215956 CADPSQ9ULU8 1353 aa22.43■■□□□ 1.18
SNU13-201ENST00000215956 MRC2Q9UBG0 1479 aa22.43■■□□□ 1.18
SNU13-201ENST00000215956 WDR62O43379 1518 aa22.41■■□□□ 1.18
SNU13-201ENST00000215956 WIZO95785 1651 aa22.31■■□□□ 1.16
SNU13-201ENST00000215956 CEP164Q9UPV0 1460 aa22.27■■□□□ 1.16
SNU13-201ENST00000215956 FANCD2Q9BXW9 1451 aa22.2■■□□□ 1.14
SNU13-201ENST00000215956 CFTRP13569 1480 aa22.12■■□□□ 1.13
SNU13-201ENST00000215956 OSCARQ8IYS5 282 aa22.1■■□□□ 1.13
SNU13-201ENST00000215956 URB2Q14146 1524 aaKnown RBP22.05■■□□□ 1.12
SNU13-201ENST00000215956 TOP2AP11388 1531 aaKnown RBP22■■□□□ 1.11
SNU13-201ENST00000215956 PRDM2Q13029 1718 aa21.96■■□□□ 1.11
SNU13-201ENST00000215956 RSF1Q96T23 1441 aaPredicted RBP21.95■■□□□ 1.1
SNU13-201ENST00000215956 RIMBP3CA6NJZ7 1639 aa21.93■■□□□ 1.1
SNU13-201ENST00000215956 RIMBP3BA6NNM3 1639 aa21.93■■□□□ 1.1
SNU13-201ENST00000215956 RIMBP3Q9UFD9 1639 aa21.93■■□□□ 1.1
SNU13-201ENST00000215956 IFT140Q96RY7 1462 aa21.83■■□□□ 1.09
SNU13-201ENST00000215956 ZNF608Q9ULD9 1512 aaPredicted RBP21.83■■□□□ 1.09
SNU13-201ENST00000215956 ARHGEF11O15085 1522 aa21.81■■□□□ 1.08
SNU13-201ENST00000215956 TOPBP1Q92547 1522 aa21.75■■□□□ 1.07
SNU13-201ENST00000215956 EIF4G3O43432 1585 aaKnown RBP21.74■■□□□ 1.07
SNU13-201ENST00000215956 CCDC88BA6NC98 1476 aa21.71■■□□□ 1.07
SNU13-201ENST00000215956 ABCC8Q09428 1581 aa21.67■■□□□ 1.06
SNU13-201ENST00000215956 CHD1O14646 1710 aa21.66■■□□□ 1.06
SNU13-201ENST00000215956 DNMBPQ6XZF7 1577 aa21.65■■□□□ 1.06
SNU13-201ENST00000215956 CYB5RLQ6IPT4 315 aa21.61■■□□□ 1.05
SNU13-201ENST00000215956 TARBP1Q13395 1621 aaKnown RBP21.6■■□□□ 1.05
SNU13-201ENST00000215956 AQRO60306 1485 aaKnown RBP eCLIP21.57■■□□□ 1.04
SNU13-201ENST00000215956 ARAP1Q96P48 1450 aa21.57■■□□□ 1.04
SNU13-201ENST00000215956 POLA1P09884 1462 aaPredicted RBP21.5■■□□□ 1.03
SNU13-201ENST00000215956 TRHP20396 242 aaPredicted RBP21.5■■□□□ 1.03
SNU13-201ENST00000215956 FBLN2P98095 1184 aa21.47■■□□□ 1.03
SNU13-201ENST00000215956 RAD54L2Q9Y4B4 1467 aa21.41■■□□□ 1.02
SNU13-201ENST00000215956 CLASP1Q7Z460 1538 aa21.37■■□□□ 1.01
SNU13-201ENST00000215956 SNAPC4Q5SXM2 1469 aa21.37■■□□□ 1.01
SNU13-201ENST00000215956 WDR97A6NE52 1622 aa21.37■■□□□ 1.01
SNU13-201ENST00000215956 TDRD9Q8NDG6 1382 aaKnown RBP21.37■■□□□ 1.01
SNU13-201ENST00000215956 SOGA1O94964 1423 aa21.36■■□□□ 1.01
SNU13-201ENST00000215956 SUPT5HO00267 1087 aaKnown RBP21.34■■□□□ 1.01
SNU13-201ENST00000215956 SYNJ1O43426 1573 aa21.33■■□□□ 1
SNU13-201ENST00000215956 FGD5Q6ZNL6 1462 aa21.31■■□□□ 1
SNU13-201ENST00000215956 MAGI1Q96QZ7 1491 aaPredicted RBP21.3■■□□□ 1
SNU13-201ENST00000215956 CHMP7Q8WUX9 453 aaPredicted RBP21.26■□□□□ 0.99
SNU13-201ENST00000215956 GRIN2BQ13224 1484 aa21.24■□□□□ 0.99
SNU13-201ENST00000215956 CUX1P39880 1505 aa21.23■□□□□ 0.99
SNU13-201ENST00000215956 SYNJ2O15056 1496 aa21.22■□□□□ 0.99
SNU13-201ENST00000215956 PBRM1Q86U86 1689 aa21.2■□□□□ 0.98
SNU13-201ENST00000215956 AEBP2Q6ZN18 517 aaPredicted RBP21.15■□□□□ 0.98
SNU13-201ENST00000215956 GAPVD1Q14C86 1478 aa21.14■□□□□ 0.97
SNU13-201ENST00000215956 ABCA5Q8WWZ7 1642 aa21.08■□□□□ 0.96
SNU13-201ENST00000215956 ABCA10Q8WWZ4 1543 aa21.04■□□□□ 0.96
SNU13-201ENST00000215956 ERCC6L2Q5T890 1561 aa21■□□□□ 0.95
SNU13-201ENST00000215956 GRIN2AQ12879 1464 aa20.98■□□□□ 0.95
SNU13-201ENST00000215956 ADAMTS12P58397 1594 aa20.95■□□□□ 0.94
SNU13-201ENST00000215956 CEP170Q5SW79 1584 aa20.94■□□□□ 0.94
SNU13-201ENST00000215956 NUP160Q12769 1436 aa20.92■□□□□ 0.94
SNU13-201ENST00000215956 SHROOM2Q13796 1616 aa20.9■□□□□ 0.94
SNU13-201ENST00000215956 WRNQ14191 1432 aaPredicted RBP eCLIP20.86■□□□□ 0.93
SNU13-201ENST00000215956 KIF13AQ9H1H9 1805 aa20.86■□□□□ 0.93
SNU13-201ENST00000215956 FHAD1B1AJZ9 1412 aa20.83■□□□□ 0.92
SNU13-201ENST00000215956 BIVM-ERCC5R4GMW8 1640 aa20.83■□□□□ 0.92
SNU13-201ENST00000215956 TOP2BQ02880 1626 aa20.81■□□□□ 0.92
SNU13-201ENST00000215956 ERICH3Q5RHP9 1530 aa20.78■□□□□ 0.92
SNU13-201ENST00000215956 PRG4Q92954 1404 aaPredicted RBP20.72■□□□□ 0.91
SNU13-201ENST00000215956 RUSC2Q8N2Y8 1516 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms