RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 TSPY10P0CW01 314 aa25.16■■□□□ 1.62
ERCC1-201ENST00000013807 KIF3BO15066 747 aa25.15■■□□□ 1.62
ERCC1-201ENST00000013807 LTBP4Q8N2S1 1624 aa25.15■■□□□ 1.62
ERCC1-201ENST00000013807 MYOM3Q5VTT5 1437 aa25.13■■□□□ 1.61
ERCC1-201ENST00000013807 KDM5DQ9BY66 1539 aa25.13■■□□□ 1.61
ERCC1-201ENST00000013807 TCOF1Q13428 1488 aaKnown RBP25.12■■□□□ 1.61
ERCC1-201ENST00000013807 A2ML1A8K2U0 1454 aa25.1■■□□□ 1.61
ERCC1-201ENST00000013807 PZPP20742 1482 aa25.1■■□□□ 1.61
ERCC1-201ENST00000013807 PKD2Q13563 968 aa25.1■■□□□ 1.61
ERCC1-201ENST00000013807 IQSEC2Q5JU85 1478 aa25.09■■□□□ 1.61
ERCC1-201ENST00000013807 DNMT1P26358 1616 aaKnown RBP25.09■■□□□ 1.61
ERCC1-201ENST00000013807 RNF17Q9BXT8 1623 aaKnown RBP25.09■■□□□ 1.61
ERCC1-201ENST00000013807 EIF2AK4Q9P2K8 1649 aaKnown RBP25.08■■□□□ 1.6
ERCC1-201ENST00000013807 WASHC2CQ9Y4E1 1318 aa25.06■■□□□ 1.6
ERCC1-201ENST00000013807 NCKAP5LQ9HCH0 1330 aa25.05■■□□□ 1.6
ERCC1-201ENST00000013807 ZC3H13Q5T200 1668 aaKnown RBP25.04■■□□□ 1.6
ERCC1-201ENST00000013807 TNRQ92752 1358 aa25.03■■□□□ 1.6
ERCC1-201ENST00000013807 FBXO31Q5XUX0 539 aaPredicted RBP25.02■■□□□ 1.6
ERCC1-201ENST00000013807 POLR1AO95602 1720 aaPredicted RBP25■■□□□ 1.59
ERCC1-201ENST00000013807 CROCC2H7BZ55 1655 aa24.99■■□□□ 1.59
ERCC1-201ENST00000013807 MROH1Q8NDA8 1641 aa24.98■■□□□ 1.59
ERCC1-201ENST00000013807 ABCC3O15438 1527 aa24.98■■□□□ 1.59
ERCC1-201ENST00000013807 DUOX2Q9NRD8 1548 aa24.98■■□□□ 1.59
ERCC1-201ENST00000013807 NLRP1Q9C000 1473 aa24.98■■□□□ 1.59
ERCC1-201ENST00000013807 PTPN23Q9H3S7 1636 aa24.97■■□□□ 1.59
ERCC1-201ENST00000013807 SHANK2Q9UPX8 1470 aa24.97■■□□□ 1.59
ERCC1-201ENST00000013807 APLP2Q06481 763 aa24.96■■□□□ 1.59
ERCC1-201ENST00000013807 SPATA31D1Q6ZQQ2 1576 aa24.94■■□□□ 1.58
ERCC1-201ENST00000013807 ABCC5O15440 1437 aa24.94■■□□□ 1.58
ERCC1-201ENST00000013807 NEURL4Q96JN8 1562 aa24.93■■□□□ 1.58
ERCC1-201ENST00000013807 ZNF335Q9H4Z2 1342 aaPredicted RBP24.92■■□□□ 1.58
ERCC1-201ENST00000013807 CFAP65Q6ZU64 1925 aaKnown RBP24.92■■□□□ 1.58
ERCC1-201ENST00000013807 THEMISQ8N1K5 641 aaPredicted RBP24.91■■□□□ 1.58
ERCC1-201ENST00000013807 CEP152O94986 1710 aa24.9■■□□□ 1.58
ERCC1-201ENST00000013807 UGGT1Q9NYU2 1555 aa24.9■■□□□ 1.58
ERCC1-201ENST00000013807 FGD6Q6ZV73 1430 aa24.9■■□□□ 1.58
ERCC1-201ENST00000013807 DEPDC5O75140 1603 aa24.9■■□□□ 1.58
ERCC1-201ENST00000013807 ERBINQ96RT1 1412 aa24.89■■□□□ 1.58
ERCC1-201ENST00000013807 PRDM15P57071 1507 aaPredicted RBP24.88■■□□□ 1.57
ERCC1-201ENST00000013807 KIF15Q9NS87 1388 aa24.88■■□□□ 1.57
ERCC1-201ENST00000013807 MED14O60244 1454 aa24.88■■□□□ 1.57
ERCC1-201ENST00000013807 DAPK1P53355 1430 aa24.87■■□□□ 1.57
ERCC1-201ENST00000013807 ARHGAP31Q2M1Z3 1444 aa24.86■■□□□ 1.57
ERCC1-201ENST00000013807 ERVK-7P63135 1459 aa24.86■■□□□ 1.57
ERCC1-201ENST00000013807 ANKLE2Q86XL3 938 aa24.86■■□□□ 1.57
ERCC1-201ENST00000013807 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.85■■□□□ 1.577e-7■■■■■ 52.8
ERCC1-201ENST00000013807 RRP7BPQ9NSQ0 103 aa24.81■■□□□ 1.56
ERCC1-201ENST00000013807 CPS1P31327 1500 aa24.81■■□□□ 1.56
ERCC1-201ENST00000013807 UBR1Q8IWV7 1749 aa24.81■■□□□ 1.56
ERCC1-201ENST00000013807 VWDEQ8N2E2 1590 aa24.78■■□□□ 1.56
ERCC1-201ENST00000013807 IQGAP1P46940 1657 aa24.78■■□□□ 1.56
ERCC1-201ENST00000013807 ANKRD30AQ9BXX3 1397 aa24.78■■□□□ 1.56
ERCC1-201ENST00000013807 NPHP4O75161 1426 aaPredicted RBP24.77■■□□□ 1.56
ERCC1-201ENST00000013807 ADGRL2O95490 1459 aa24.76■■□□□ 1.55
ERCC1-201ENST00000013807 LMTK2Q8IWU2 1503 aa24.76■■□□□ 1.55
ERCC1-201ENST00000013807 KDM5AP29375 1690 aaKnown RBP24.73■■□□□ 1.55
ERCC1-201ENST00000013807 ARHGAP23Q9P227 1491 aa24.72■■□□□ 1.55
ERCC1-201ENST00000013807 UBAP1LF5GYI3 381 aa24.72■■□□□ 1.55
ERCC1-201ENST00000013807 SLIT1O75093 1534 aa24.71■■□□□ 1.55
ERCC1-201ENST00000013807 KANK1Q14678 1352 aa24.71■■□□□ 1.55
ERCC1-201ENST00000013807 STRCP1A6NGW2 1772 aa24.68■■□□□ 1.54
ERCC1-201ENST00000013807 CHIC2Q9UKJ5 165 aa24.68■■□□□ 1.54
ERCC1-201ENST00000013807 PIK3C2BO00750 1634 aa24.66■■□□□ 1.54
ERCC1-201ENST00000013807 SCAF11Q99590 1463 aaKnown RBP24.65■■□□□ 1.54
ERCC1-201ENST00000013807 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.65■■□□□ 1.545e-7■■□□□ 12.5
ERCC1-201ENST00000013807 EFCAB6Q5THR3 1501 aa24.63■■□□□ 1.53
ERCC1-201ENST00000013807 TOM1O60784 492 aa24.63■■□□□ 1.53
ERCC1-201ENST00000013807 DISP3Q9P2K9 1392 aa24.63■■□□□ 1.53
ERCC1-201ENST00000013807 LTKP29376 864 aa24.62■■□□□ 1.53
ERCC1-201ENST00000013807 NOS1P29475 1434 aa24.61■■□□□ 1.53
ERCC1-201ENST00000013807 SYNMO15061 1565 aa24.61■■□□□ 1.53
ERCC1-201ENST00000013807 ANKRD50Q9ULJ7 1429 aa24.61■■□□□ 1.53
ERCC1-201ENST00000013807 TMEM2Q9UHN6 1383 aa24.59■■□□□ 1.53
ERCC1-201ENST00000013807 FAM50AQ14320 339 aaKnown RBP24.59■■□□□ 1.53
ERCC1-201ENST00000013807 TXNDC2Q86VQ3 553 aa24.59■■□□□ 1.53
ERCC1-201ENST00000013807 ALKQ9UM73 1620 aa24.59■■□□□ 1.53
ERCC1-201ENST00000013807 RPRD2Q5VT52 1461 aaKnown RBP24.58■■□□□ 1.53
ERCC1-201ENST00000013807 LRRC7Q96NW7 1537 aa24.58■■□□□ 1.53
ERCC1-201ENST00000013807 IDI1Q13907 227 aa24.58■■□□□ 1.53
ERCC1-201ENST00000013807 EID1Q9Y6B2 187 aa24.56■■□□□ 1.52
ERCC1-201ENST00000013807 SLC52A1Q9NWF4 448 aa24.55■■□□□ 1.52
ERCC1-201ENST00000013807 TET3O43151 1660 aa24.55■■□□□ 1.52
ERCC1-201ENST00000013807 ROCK1Q13464 1354 aa24.54■■□□□ 1.52
ERCC1-201ENST00000013807 XIRP1Q702N8 1843 aaKnown RBP24.53■■□□□ 1.52
ERCC1-201ENST00000013807 UNC13BO14795 1591 aa24.53■■□□□ 1.52
ERCC1-201ENST00000013807 GCC2Q8IWJ2 1684 aa24.53■■□□□ 1.52
ERCC1-201ENST00000013807 ILDR2Q71H61 639 aa24.52■■□□□ 1.52
ERCC1-201ENST00000013807 ADGRB3O60242 1522 aa24.51■■□□□ 1.51
ERCC1-201ENST00000013807 STAG3Q9UJ98 1225 aa24.49■■□□□ 1.51
ERCC1-201ENST00000013807 HSPA1LP34931 641 aa24.48■■□□□ 1.51
ERCC1-201ENST00000013807 PIP4K2BP78356 416 aa24.47■■□□□ 1.51
ERCC1-201ENST00000013807 MYO5BQ9ULV0 1848 aa24.47■■□□□ 1.51
ERCC1-201ENST00000013807 IQGAP3Q86VI3 1631 aa24.44■■□□□ 1.5
ERCC1-201ENST00000013807 E9PCH4 1651 aa24.43■■□□□ 1.5
ERCC1-201ENST00000013807 SCAF1Q9H7N4 1312 aaKnown RBP24.43■■□□□ 1.5
ERCC1-201ENST00000013807 TMEM131LA2VDJ0 1609 aa24.43■■□□□ 1.5
ERCC1-201ENST00000013807 SOCS7O14512 581 aa24.41■■□□□ 1.5
ERCC1-201ENST00000013807 KCNA6P17658 529 aa24.4■■□□□ 1.5
ERCC1-201ENST00000013807 ZFYVE9O95405 1425 aa24.4■■□□□ 1.5
ERCC1-201ENST00000013807 NWD1Q149M9 1564 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms