RNA–Protein interactions for RNA: ENSMUST00000045705.13

Ambra1-202, Transcript of Activating molecule in BECN1-regulated autophagy protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ambra1, Length 5,203 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ambra1-202ENSMUST00000045705 Sox12Q04890 314 aa11.38□□□□□ -0.59
Ambra1-202ENSMUST00000045705 Apbb1Q9QXJ1 710 aa11.37□□□□□ -0.59
Ambra1-202ENSMUST00000045705 Vps8Q0P5W1 1427 aa11.37□□□□□ -0.59
Ambra1-202ENSMUST00000045705 Pes1Q9EQ61 584 aaKnown RBP11.37□□□□□ -0.59
Ambra1-202ENSMUST00000045705 Spag9Q58A65 1321 aaKnown RBP11.36□□□□□ -0.59
Ambra1-202ENSMUST00000045705 Pde3bQ61409 1100 aa11.36□□□□□ -0.59
Ambra1-202ENSMUST00000045705 Efcab5A0JP43 1406 aa11.36□□□□□ -0.59
Ambra1-202ENSMUST00000045705 Polr1aO35134 1717 aaKnown RBP11.36□□□□□ -0.59
Ambra1-202ENSMUST00000045705 Nol10Q5RJG1 687 aaKnown RBP11.35□□□□□ -0.59
Ambra1-202ENSMUST00000045705 Birc3O08863 600 aa11.35□□□□□ -0.59
Ambra1-202ENSMUST00000045705 Utp14aQ640M1 767 aaKnown RBP11.35□□□□□ -0.59
Ambra1-202ENSMUST00000045705 Arhgef5E9Q7D5 1581 aa11.33□□□□□ -0.59
Ambra1-202ENSMUST00000045705 U2af1Q9D883 239 aaKnown RBP11.33□□□□□ -0.59
Ambra1-202ENSMUST00000045705 Ush1cQ9ES64 910 aa11.33□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Isy1Q69ZQ2 285 aaKnown RBP11.33□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Eif2s2Q99L45 331 aaKnown RBP11.33□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Erich6bQ9D4S6 220 aa11.33□□□□□ -0.6
Ambra1-202ENSMUST00000045705 KnstrnQ9D9Z1 312 aaKnown RBP11.33□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Cc2d2bA0A286YDU8 1405 aa11.33□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Q3TQI7 289 aaKnown RBP11.32□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Dcaf11Q91VU6 549 aa11.32□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Urb2E9Q7L1 1524 aaKnown RBP11.32□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Becn1O88597 448 aa11.32□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Arap1Q4LDD4 1452 aa11.32□□□□□ -0.6
Ambra1-202ENSMUST00000045705 U2surpQ6NV83 1029 aaKnown RBP11.32□□□□□ -0.6
Ambra1-202ENSMUST00000045705 TchhA0A0B4J1F9 1599 aa11.32□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Hsp90b1P08113 802 aaKnown RBP11.31□□□□□ -0.6
Ambra1-202ENSMUST00000045705 MsnP26041 577 aaKnown RBP11.31□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Kcnh8P59111 1102 aa11.31□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Znf692Q3U381 531 aa11.31□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Fam43aQ8BUP8 424 aa11.31□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Fbxo2Q80UW2 297 aa11.31□□□□□ -0.6
Ambra1-202ENSMUST00000045705 MccE9PWI3 1003 aa11.31□□□□□ -0.6
Ambra1-202ENSMUST00000045705 PnnO35691 725 aaKnown RBP11.31□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Q8BT18 775 aa11.3□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Ak7Q9D2H2 614 aa11.3□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Dusp27Q148W8 1138 aa11.3□□□□□ -0.6
Ambra1-202ENSMUST00000045705 SlkO54988 1233 aa11.3□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Fan1Q69ZT1 1020 aa11.3□□□□□ -0.6
Ambra1-202ENSMUST00000045705 L3mbtl2P59178 703 aa11.29□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Vsig10D3YX43 558 aa11.29□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Paxip1Q6NZQ4 1056 aa11.29□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Shroom4Q1W617 1475 aa11.29□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Mrc2Q64449 1479 aa11.29□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Cux1P53564 1515 aa11.29□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Golga2Q921M4 999 aa11.29□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Speer4f1Q9D5Q6 258 aa11.29□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Rab11fip3Q8CHD8 1047 aa11.28□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Adam1bQ8R534 806 aa11.28□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Nsd2Q8BVE8 1365 aa11.28□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Fgd6Q69ZL1 1399 aa11.27□□□□□ -0.6
Ambra1-202ENSMUST00000045705 Tiam1Q60610 1591 aa11.27□□□□□ -0.61
Ambra1-202ENSMUST00000045705 Sh3bp5Q9Z131 463 aa11.27□□□□□ -0.61
Ambra1-202ENSMUST00000045705 Dnai2A2AC93 623 aa11.27□□□□□ -0.61
Ambra1-202ENSMUST00000045705 Prdm16A2A935 1275 aa11.27□□□□□ -0.61
Ambra1-202ENSMUST00000045705 Plin1Q8CGN5 517 aa11.26□□□□□ -0.61
Ambra1-202ENSMUST00000045705 Armcx1Q9CX83 456 aa11.26□□□□□ -0.61
Ambra1-202ENSMUST00000045705 Clstn1Q9EPL2 979 aa11.26□□□□□ -0.61
Ambra1-202ENSMUST00000045705 Shq1Q7TMX5 569 aa11.26□□□□□ -0.61
Ambra1-202ENSMUST00000045705 ErbinQ80TH2 1402 aa11.25□□□□□ -0.61
Ambra1-202ENSMUST00000045705 Naip1Q9QWK5 1403 aa11.25□□□□□ -0.61
Ambra1-202ENSMUST00000045705 Tdrd9Q14BI7 1383 aa11.25□□□□□ -0.61
Ambra1-202ENSMUST00000045705 Tex2Q6ZPJ0 1128 aaKnown RBP11.25□□□□□ -0.61
Ambra1-202ENSMUST00000045705 Kank1E9Q238 1360 aa11.24□□□□□ -0.61
Ambra1-202ENSMUST00000045705 Rabep1O35551 862 aa11.24□□□□□ -0.61
Ambra1-202ENSMUST00000045705 IbspQ61711 324 aa11.24□□□□□ -0.61
Ambra1-202ENSMUST00000045705 Usp47Q8BY87 1376 aa11.24□□□□□ -0.61
Ambra1-202ENSMUST00000045705 Ccdc183A2AJB1 534 aa11.23□□□□□ -0.61
Ambra1-202ENSMUST00000045705 Plekhg5Q66T02 1073 aa11.23□□□□□ -0.61
Ambra1-202ENSMUST00000045705 Nkx1-2P42580 305 aa11.23□□□□□ -0.61
Ambra1-202ENSMUST00000045705 Ncoa1P70365 1447 aa11.23□□□□□ -0.61
Ambra1-202ENSMUST00000045705 Slc4a1apE9PX68 744 aa11.22□□□□□ -0.61
Ambra1-202ENSMUST00000045705 Rsph3aQ3UFY4 516 aa11.22□□□□□ -0.61
Ambra1-202ENSMUST00000045705 PtmsQ9D0J8 101 aaKnown RBP11.22□□□□□ -0.61
Ambra1-202ENSMUST00000045705 Cabp4Q8VHC5 271 aa11.22□□□□□ -0.61
Ambra1-202ENSMUST00000045705 Stk31Q99MW1 1018 aa11.22□□□□□ -0.61
Ambra1-202ENSMUST00000045705 Duox2A2AQ99 1517 aa11.21□□□□□ -0.61
Ambra1-202ENSMUST00000045705 Tnnt1O88346 262 aa11.21□□□□□ -0.61
Ambra1-202ENSMUST00000045705 Ylpm1Q9R0I7 1386 aaKnown RBP11.21□□□□□ -0.61
Ambra1-202ENSMUST00000045705 Mink1Q9JM52 1308 aa11.21□□□□□ -0.62
Ambra1-202ENSMUST00000045705 Naip5Q9R016 1403 aa11.21□□□□□ -0.62
Ambra1-202ENSMUST00000045705 Rassf8Q8CJ96 419 aa11.21□□□□□ -0.62
Ambra1-202ENSMUST00000045705 Zfp444Q3TDV8 331 aaKnown RBP11.2□□□□□ -0.62
Ambra1-202ENSMUST00000045705 Tmco5bQ80X59 307 aa11.2□□□□□ -0.62
Ambra1-202ENSMUST00000045705 CadpsQ80TJ1 1355 aa11.2□□□□□ -0.62
Ambra1-202ENSMUST00000045705 Usp40Q8BWR4 1235 aa11.2□□□□□ -0.62
Ambra1-202ENSMUST00000045705 Ccar1Q8CH18 1146 aaKnown RBP11.2□□□□□ -0.62
Ambra1-202ENSMUST00000045705 Tmc1Q8R4P5 757 aa11.2□□□□□ -0.62
Ambra1-202ENSMUST00000045705 Ift140E9PY46 1464 aa11.2□□□□□ -0.62
Ambra1-202ENSMUST00000045705 Rbm10Q99KG3 930 aaKnown RBP11.19□□□□□ -0.62
Ambra1-202ENSMUST00000045705 NrkQ9R0G8 1455 aa11.19□□□□□ -0.62
Ambra1-202ENSMUST00000045705 Rad54l2Q99NG0 1466 aa11.19□□□□□ -0.62
Ambra1-202ENSMUST00000045705 Kif16bB1AVY7 1312 aa11.19□□□□□ -0.62
Ambra1-202ENSMUST00000045705 EprsQ8CGC7 1512 aaKnown RBP11.19□□□□□ -0.62
Ambra1-202ENSMUST00000045705 Bcl11bQ99PV8 884 aa11.18□□□□□ -0.62
Ambra1-202ENSMUST00000045705 Map7d2A2AG50 781 aa11.18□□□□□ -0.62
Ambra1-202ENSMUST00000045705 Fyb1O35601 819 aa11.18□□□□□ -0.62
Ambra1-202ENSMUST00000045705 Ppp1r9bQ6R891 817 aaKnown RBP11.18□□□□□ -0.62
Ambra1-202ENSMUST00000045705 PogkQ80TC5 607 aa11.17□□□□□ -0.62
Ambra1-202ENSMUST00000045705 Atf3Q60765 181 aa11.17□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms