Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Gm25239-201ENSMUST00000174915 86 ntBASIC43.49■■■■■ 4.55
Tmc1Q8R4P5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC42.71■■■■■ 4.43
Tmc1Q8R4P5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC41.24■■■■■ 4.19
Tmc1Q8R4P5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC41.13■■■■■ 4.18
Tmc1Q8R4P5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.27■■■■■ 4.04
Tmc1Q8R4P5 Psd-208ENSMUST00000224556 2034 ntBASIC40.16■■■■■ 4.02
Tmc1Q8R4P5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.74■■■■□ 3.95
Tmc1Q8R4P5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC39.56■■■■□ 3.92
Tmc1Q8R4P5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC39.01■■■■□ 3.84
Tmc1Q8R4P5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
Tmc1Q8R4P5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC38.79■■■■□ 3.8
Tmc1Q8R4P5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC38.35■■■■□ 3.73
Tmc1Q8R4P5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC38.33■■■■□ 3.73
Tmc1Q8R4P5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC38.29■■■■□ 3.72
Tmc1Q8R4P5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC38.18■■■■□ 3.7
Tmc1Q8R4P5 Gm15042-201ENSMUST00000120212 883 ntBASIC37.88■■■■□ 3.65
Tmc1Q8R4P5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
Tmc1Q8R4P5 Gm24109-201ENSMUST00000175489 103 ntBASIC37.72■■■■□ 3.63
Tmc1Q8R4P5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC37.7■■■■□ 3.63
Tmc1Q8R4P5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC37.65■■■■□ 3.62
Tmc1Q8R4P5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC37.46■■■■□ 3.59
Tmc1Q8R4P5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC37.32■■■■□ 3.56
Tmc1Q8R4P5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC37.18■■■■□ 3.54
Tmc1Q8R4P5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC37.1■■■■□ 3.53
Tmc1Q8R4P5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC37.1■■■■□ 3.53
Tmc1Q8R4P5 Gm15045-201ENSMUST00000117359 883 ntBASIC37.01■■■■□ 3.52
Tmc1Q8R4P5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
Tmc1Q8R4P5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
Tmc1Q8R4P5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
Tmc1Q8R4P5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.74■■■■□ 3.47
Tmc1Q8R4P5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.61■■■■□ 3.45
Tmc1Q8R4P5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC36.58■■■■□ 3.45
Tmc1Q8R4P5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC36.58■■■■□ 3.45
Tmc1Q8R4P5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC36.56■■■■□ 3.44
Tmc1Q8R4P5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC36.41■■■■□ 3.42
Tmc1Q8R4P5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC36.35■■■■□ 3.41
Tmc1Q8R4P5 Gm23366-201ENSMUST00000175022 89 ntBASIC36.33■■■■□ 3.41
Tmc1Q8R4P5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC36.33■■■■□ 3.41
Tmc1Q8R4P5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC36.28■■■■□ 3.4
Tmc1Q8R4P5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC36.22■■■■□ 3.39
Tmc1Q8R4P5 Gm10524-201ENSMUST00000181931 1893 ntBASIC36.14■■■■□ 3.38
Tmc1Q8R4P5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
Tmc1Q8R4P5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC36.09■■■■□ 3.37
Tmc1Q8R4P5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
Tmc1Q8R4P5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.36
Tmc1Q8R4P5 Gm42596-201ENSMUST00000196305 1958 ntBASIC35.97■■■■□ 3.35
Tmc1Q8R4P5 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC35.89■■■■□ 3.34
Tmc1Q8R4P5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
Tmc1Q8R4P5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC35.81■■■■□ 3.32
Tmc1Q8R4P5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC35.79■■■■□ 3.32
Tmc1Q8R4P5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC35.72■■■■□ 3.31
Tmc1Q8R4P5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.3
Tmc1Q8R4P5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
Tmc1Q8R4P5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
Tmc1Q8R4P5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC35.56■■■■□ 3.28
Tmc1Q8R4P5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC35.45■■■■□ 3.27
Tmc1Q8R4P5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
Tmc1Q8R4P5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
Tmc1Q8R4P5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.23■■■■□ 3.23
Tmc1Q8R4P5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC35.2■■■■□ 3.22
Tmc1Q8R4P5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
Tmc1Q8R4P5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
Tmc1Q8R4P5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
Tmc1Q8R4P5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC35.09■■■■□ 3.21
Tmc1Q8R4P5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35.05■■■■□ 3.2
Tmc1Q8R4P5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.95■■■■□ 3.19
Tmc1Q8R4P5 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC34.94■■■■□ 3.18
Tmc1Q8R4P5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC34.92■■■■□ 3.18
Tmc1Q8R4P5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Tmc1Q8R4P5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Tmc1Q8R4P5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.88■■■■□ 3.17
Tmc1Q8R4P5 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Tmc1Q8R4P5 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
Tmc1Q8R4P5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC34.79■■■■□ 3.16
Tmc1Q8R4P5 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
Tmc1Q8R4P5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
Tmc1Q8R4P5 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC34.67■■■■□ 3.14
Tmc1Q8R4P5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC34.56■■■■□ 3.12
Tmc1Q8R4P5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Tmc1Q8R4P5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Tmc1Q8R4P5 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Tmc1Q8R4P5 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Tmc1Q8R4P5 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC34.46■■■■□ 3.11
Tmc1Q8R4P5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC34.43■■■■□ 3.1
Tmc1Q8R4P5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
Tmc1Q8R4P5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Tmc1Q8R4P5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.4■■■■□ 3.1
Tmc1Q8R4P5 Gm25238-201ENSMUST00000174914 89 ntBASIC34.37■■■■□ 3.09
Tmc1Q8R4P5 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC34.37■■■■□ 3.09
Tmc1Q8R4P5 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC34.35■■■■□ 3.09
Tmc1Q8R4P5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Tmc1Q8R4P5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC34.26■■■■□ 3.07
Tmc1Q8R4P5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC34.18■■■■□ 3.06
Tmc1Q8R4P5 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC34.14■■■■□ 3.06
Tmc1Q8R4P5 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Tmc1Q8R4P5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC34.11■■■■□ 3.05
Tmc1Q8R4P5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
Tmc1Q8R4P5 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
Tmc1Q8R4P5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC33.91■■■■□ 3.02
Tmc1Q8R4P5 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms