RNA–Protein interactions for RNA: YBR106W

PHO88, Transcript of Probable membrane protein, yeastyeast

Gene PHO88, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO88YBR106W NOP6Q07623 225 aaKnown RBP3.25□□□□□ -1.89
PHO88YBR106W PEX27Q08580 376 aa3.25□□□□□ -1.89
PHO88YBR106W YPL199CQ08954 240 aa3.25□□□□□ -1.89
PHO88YBR106W GLE1Q12315 538 aa3.25□□□□□ -1.89
PHO88YBR106W IML1P47170 1584 aa3.25□□□□□ -1.89
PHO88YBR106W RNR2P09938 399 aaKnown RBP3.24□□□□□ -1.89
PHO88YBR106W YFL068WP0CX99 160 aa3.24□□□□□ -1.89
PHO88YBR106W YLL066W-AP0CY00 160 aa3.24□□□□□ -1.89
PHO88YBR106W YLL067W-AP0CY01 160 aa3.24□□□□□ -1.89
PHO88YBR106W GCD2P12754 651 aaPredicted RBP3.24□□□□□ -1.89
PHO88YBR106W NDC1P32500 655 aa3.24□□□□□ -1.89
PHO88YBR106W GLC7P32598 312 aaKnown RBP3.24□□□□□ -1.89
PHO88YBR106W YSC83P32792 385 aa3.24□□□□□ -1.89
PHO88YBR106W RGT1P32862 1170 aa3.24□□□□□ -1.89
PHO88YBR106W MNS1P32906 549 aa3.24□□□□□ -1.89
PHO88YBR106W SUR1P33300 382 aa3.24□□□□□ -1.89
PHO88YBR106W SKN1P33336 771 aa3.24□□□□□ -1.89
PHO88YBR106W SKT5P34226 696 aa3.24□□□□□ -1.89
PHO88YBR106W MST28P39552 234 aa3.24□□□□□ -1.89
PHO88YBR106W VPS52P39904 641 aa3.24□□□□□ -1.89
PHO88YBR106W ATM1P40416 690 aa3.24□□□□□ -1.89
PHO88YBR106W SNL1P40548 159 aa3.24□□□□□ -1.89
PHO88YBR106W SAD1P43589 448 aa3.24□□□□□ -1.89
PHO88YBR106W POP6P53218 158 aa3.24□□□□□ -1.89
PHO88YBR106W MPS1P54199 764 aa3.24□□□□□ -1.89
PHO88YBR106W EGD1Q02642 157 aaKnown RBP3.24□□□□□ -1.89
PHO88YBR106W URC2Q04411 772 aa3.24□□□□□ -1.89
PHO88YBR106W SMA2Q04658 369 aa3.24□□□□□ -1.89
PHO88YBR106W HCR1Q05775 265 aaKnown RBP3.24□□□□□ -1.89
PHO88YBR106W SMD2Q06217 110 aaKnown RBP3.24□□□□□ -1.89
PHO88YBR106W GRS2Q06817 618 aa3.24□□□□□ -1.89
PHO88YBR106W YOL075CQ08234 1294 aa3.24□□□□□ -1.89
PHO88YBR106W SRL1Q08673 210 aa3.24□□□□□ -1.89
PHO88YBR106W MDY2Q12285 212 aa3.24□□□□□ -1.89
PHO88YBR106W RKM5Q12367 367 aa3.24□□□□□ -1.89
PHO88YBR106W CSR2Q12734 1121 aa3.24□□□□□ -1.89
PHO88YBR106W YPT1P01123 206 aaKnown RBP3.23□□□□□ -1.89
PHO88YBR106W RPL12AP0CX53 165 aaKnown RBP3.23□□□□□ -1.89
PHO88YBR106W RPL12BP0CX54 165 aa3.23□□□□□ -1.89
PHO88YBR106W MAS1P10507 462 aa3.23□□□□□ -1.89
PHO88YBR106W MAS2P11914 482 aa3.23□□□□□ -1.89
PHO88YBR106W MRPL25P23369 157 aa3.23□□□□□ -1.89
PHO88YBR106W KKQ8P36004 724 aa3.23□□□□□ -1.89
PHO88YBR106W SPP381P38282 291 aaPredicted RBP3.23□□□□□ -1.89
PHO88YBR106W ARC40P38328 384 aaKnown RBP3.23□□□□□ -1.89
PHO88YBR106W MSG5P38590 489 aa3.23□□□□□ -1.89
PHO88YBR106W GPI16P38875 610 aa3.23□□□□□ -1.89
PHO88YBR106W MET30P39014 640 aa3.23□□□□□ -1.89
PHO88YBR106W HAT2P39984 401 aa3.23□□□□□ -1.89
PHO88YBR106W YER034WP40022 185 aaKnown RBP3.23□□□□□ -1.89
PHO88YBR106W YJL070CP40361 888 aa3.23□□□□□ -1.89
PHO88YBR106W YIL169CP40442 995 aa3.23□□□□□ -1.89
PHO88YBR106W YIL152WP40455 235 aa3.23□□□□□ -1.89
PHO88YBR106W GAT1P43574 510 aa3.23□□□□□ -1.89
PHO88YBR106W SHE10P53075 577 aa3.23□□□□□ -1.89
PHO88YBR106W UTP6Q02354 440 aaKnown RBP3.23□□□□□ -1.89
PHO88YBR106W RTT103Q05543 409 aa3.23□□□□□ -1.89
PHO88YBR106W YLH47Q06493 454 aa3.23□□□□□ -1.89
PHO88YBR106W RMD5Q12508 421 aa3.23□□□□□ -1.89
PHO88YBR106W CBP2P03874 630 aaPredicted RBP3.22□□□□□ -1.89
PHO88YBR106W CDC37P06101 506 aaKnown RBP3.22□□□□□ -1.89
PHO88YBR106W STE3P06783 470 aa3.22□□□□□ -1.89
PHO88YBR106W SCH9P11792 824 aaKnown RBP3.22□□□□□ -1.89
PHO88YBR106W PSO2P30620 661 aa3.22□□□□□ -1.89
PHO88YBR106W MSK1P32048 576 aa3.22□□□□□ -1.89
PHO88YBR106W CTM1P38818 585 aa3.22□□□□□ -1.89
PHO88YBR106W BFR1P38934 470 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
PHO88YBR106W SSO2P39926 295 aa3.22□□□□□ -1.89
PHO88YBR106W SPG5P42933 373 aa3.22□□□□□ -1.89
PHO88YBR106W AIP1P46680 615 aaKnown RBP3.22□□□□□ -1.89
PHO88YBR106W SFH5P47008 294 aa3.22□□□□□ -1.89
PHO88YBR106W RTT101P47050 842 aa3.22□□□□□ -1.89
PHO88YBR106W RET3P53600 189 aa3.22□□□□□ -1.89
PHO88YBR106W YNL146WP53906 100 aa3.22□□□□□ -1.89
PHO88YBR106W REX2P54964 269 aaKnown RBP3.22□□□□□ -1.89
PHO88YBR106W YMR087WQ04299 284 aa3.22□□□□□ -1.89
PHO88YBR106W SNA4Q07549 140 aa3.22□□□□□ -1.89
PHO88YBR106W PML1Q07930 204 aaPredicted RBP3.22□□□□□ -1.89
PHO88YBR106W YAP7Q08182 245 aa3.22□□□□□ -1.89
PHO88YBR106W LDS2Q08218 356 aa3.22□□□□□ -1.89
PHO88YBR106W SRL2Q12020 392 aa3.22□□□□□ -1.89
PHO88YBR106W YPR022CQ12139 1133 aa3.22□□□□□ -1.89
PHO88YBR106W RAD61Q99359 647 aa3.22□□□□□ -1.89
PHO88YBR106W TPK3P05986 398 aa3.21□□□□□ -1.9
PHO88YBR106W RPL20AP0CX23 172 aaKnown RBP3.21□□□□□ -1.9
PHO88YBR106W RPL20BP0CX24 172 aaPredicted RBP3.21□□□□□ -1.9
PHO88YBR106W SAR1P20606 190 aaKnown RBP3.21□□□□□ -1.9
PHO88YBR106W PPZ1P26570 692 aa3.21□□□□□ -1.9
PHO88YBR106W ARC19P33204 171 aaKnown RBP3.21□□□□□ -1.9
PHO88YBR106W PMU1P36069 295 aa3.21□□□□□ -1.9
PHO88YBR106W RIB5P38145 238 aa3.21□□□□□ -1.9
PHO88YBR106W HSM3P38348 480 aa3.21□□□□□ -1.9
PHO88YBR106W YMR134WP40207 237 aa3.21□□□□□ -1.9
PHO88YBR106W OSW5P40219 148 aa3.21□□□□□ -1.9
PHO88YBR106W LYS12P40495 371 aaKnown RBP3.21□□□□□ -1.9
PHO88YBR106W TOS3P43637 560 aa3.21□□□□□ -1.9
PHO88YBR106W STE24P47154 453 aa3.21□□□□□ -1.9
PHO88YBR106W YGL114WP53134 725 aa3.21□□□□□ -1.9
PHO88YBR106W YGR117CP53270 476 aa3.21□□□□□ -1.9
PHO88YBR106W ERV25P54837 211 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 59.5 ms