RNA–Protein interactions for RNA: YBR106W

PHO88, Transcript of Probable membrane protein, yeastyeast

Gene PHO88, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO88YBR106W FAP1P53971 965 aa9.34□□□□□ -0.91
PHO88YBR106W DRS1P32892 752 aaKnown RBP9.31□□□□□ -0.92
PHO88YBR106W MTC1P47018 478 aaKnown RBP8.92□□□□□ -0.98
PHO88YBR106W PRY3P47033 881 aa8.83□□□□□ -1
PHO88YBR106W YCK3P39962 524 aa8.32□□□□□ -1.08
PHO88YBR106W AAD16Q02895 342 aa8.26□□□□□ -1.09
PHO88YBR106W BFR2Q06631 534 aaKnown RBP8.25□□□□□ -1.09
PHO88YBR106W HAA1Q12753 694 aaKnown RBP8.18□□□□□ -1.1
PHO88YBR106W PRI1P10363 409 aa8.16□□□□□ -1.1
PHO88YBR106W TFA1P36100 482 aa8.07□□□□□ -1.12
PHO88YBR106W DIP2Q12220 943 aaPredicted RBP7.82□□□□□ -1.16
PHO88YBR106W AVT3P36062 692 aa7.77□□□□□ -1.17
PHO88YBR106W TSR3Q12094 313 aaKnown RBP7.67□□□□□ -1.18
PHO88YBR106W ISW2Q08773 1120 aa7.63□□□□□ -1.19
PHO88YBR106W RPG1P38249 964 aaKnown RBP7.6□□□□□ -1.19
PHO88YBR106W RQC2Q12532 1038 aaKnown RBP7.54□□□□□ -1.2
PHO88YBR106W YGL015CP33199 130 aa7.35□□□□□ -1.23
PHO88YBR106W MRPL32P25348 183 aa7.34□□□□□ -1.23
PHO88YBR106W RSE1Q04693 1361 aaKnown RBP7.32□□□□□ -1.24
PHO88YBR106W BUD31P25337 157 aaPredicted RBP7.27□□□□□ -1.25
PHO88YBR106W RPL17AP05740 184 aaKnown RBP6.94□□□□□ -1.3
PHO88YBR106W RPL17BP46990 184 aaKnown RBP6.94□□□□□ -1.3
PHO88YBR106W REB1P21538 810 aa6.89□□□□□ -1.31
PHO88YBR106W CDC27P38042 758 aa6.81□□□□□ -1.32
PHO88YBR106W SIS1P25294 352 aaKnown RBP6.8□□□□□ -1.32
PHO88YBR106W DMA1P38823 416 aa6.74□□□□□ -1.33
PHO88YBR106W RIM101P33400 625 aa6.73□□□□□ -1.33
PHO88YBR106W MAP2P38174 421 aaKnown RBP6.73□□□□□ -1.33
PHO88YBR106W UBP10P53874 792 aaPredicted RBP6.73□□□□□ -1.33
PHO88YBR106W PTP3P40048 928 aa6.69□□□□□ -1.34
PHO88YBR106W SPT21P35209 758 aa6.66□□□□□ -1.34
PHO88YBR106W SSP1P38871 571 aa6.64□□□□□ -1.35
PHO88YBR106W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.6□□□□□ -1.35not detected
PHO88YBR106W UBP9P39967 754 aa6.59□□□□□ -1.35
PHO88YBR106W TAF7Q05021 590 aa6.56□□□□□ -1.36
PHO88YBR106W YIL055CP40523 627 aaKnown RBP6.54□□□□□ -1.36
PHO88YBR106W LEO1P38439 464 aa6.52□□□□□ -1.37
PHO88YBR106W YKR023WP36119 530 aaKnown RBP6.5□□□□□ -1.37
PHO88YBR106W OXP1P28273 1286 aa6.47□□□□□ -1.37
PHO88YBR106W TIF4632P39936 914 aaKnown RBP6.46□□□□□ -1.38
PHO88YBR106W TGL3P40308 642 aa6.44□□□□□ -1.38
PHO88YBR106W YAH1Q12184 172 aaKnown RBP6.44□□□□□ -1.38
PHO88YBR106W DCD1P06773 312 aa6.4□□□□□ -1.38
PHO88YBR106W MGA2P40578 1113 aa6.4□□□□□ -1.38
PHO88YBR106W HOP09932 586 aa6.38□□□□□ -1.39
PHO88YBR106W RSM7P47150 247 aa6.38□□□□□ -1.39
PHO88YBR106W SCY1P53009 804 aa6.38□□□□□ -1.39
PHO88YBR106W YLR271WQ06152 274 aa6.37□□□□□ -1.39
PHO88YBR106W TFC8Q12308 588 aa6.36□□□□□ -1.39
PHO88YBR106W SLX5P32828 619 aaKnown RBP6.34□□□□□ -1.39
PHO88YBR106W SAS10Q12136 610 aaPredicted RBP6.33□□□□□ -1.4
PHO88YBR106W LEU3P08638 886 aa6.32□□□□□ -1.4
PHO88YBR106W BBC1P47068 1157 aa6.25□□□□□ -1.41
PHO88YBR106W AI2P03876 854 aa6.2□□□□□ -1.42
PHO88YBR106W IFH1P39520 1085 aa6.18□□□□□ -1.42
PHO88YBR106W PSD2P53037 1138 aaKnown RBP6.18□□□□□ -1.42
PHO88YBR106W CKB1P43639 278 aa6.17□□□□□ -1.42
PHO88YBR106W RPN1P38764 993 aaKnown RBP6.16□□□□□ -1.42
PHO88YBR106W YBL029C-AQ3E756 94 aa6.16□□□□□ -1.42
PHO88YBR106W CST9Q06032 482 aa6.15□□□□□ -1.42
PHO88YBR106W BCH2P36122 765 aa6.11□□□□□ -1.43
PHO88YBR106W SPB4P25808 606 aaPredicted RBP6.09□□□□□ -1.43
PHO88YBR106W SET1P38827 1080 aaKnown RBP6.08□□□□□ -1.44
PHO88YBR106W RTG3P38165 486 aa6.05□□□□□ -1.44
PHO88YBR106W MST1P07236 462 aa6.04□□□□□ -1.44
PHO88YBR106W RAM2P29703 316 aa6.03□□□□□ -1.44
PHO88YBR106W EPS1P40557 701 aa6.03□□□□□ -1.44
PHO88YBR106W YPR148CQ06523 435 aa6.03□□□□□ -1.44
PHO88YBR106W NOP53Q12080 455 aaKnown RBP6.03□□□□□ -1.44
PHO88YBR106W VNX1P42839 908 aa6.02□□□□□ -1.45
PHO88YBR106W MRM1P25270 412 aa6.01□□□□□ -1.45
PHO88YBR106W MAK11P20484 414 aaKnown RBP6□□□□□ -1.45
PHO88YBR106W VPS70P47161 811 aa6□□□□□ -1.45
PHO88YBR106W HGH1P48362 394 aaKnown RBP6□□□□□ -1.45
PHO88YBR106W BDF1P35817 686 aa5.98□□□□□ -1.45
PHO88YBR106W AIR2Q12476 344 aaKnown RBP5.98□□□□□ -1.45
PHO88YBR106W YJL171CP46992 396 aa5.96□□□□□ -1.46
PHO88YBR106W SPP1Q03012 353 aa5.96□□□□□ -1.46
PHO88YBR106W YOR238WQ08634 303 aa5.96□□□□□ -1.46
PHO88YBR106W DSF2P38213 736 aa5.94□□□□□ -1.46
PHO88YBR106W FKH1P40466 484 aa5.93□□□□□ -1.46
PHO88YBR106W PBS2P08018 668 aa5.91□□□□□ -1.46
PHO88YBR106W DMA2P53924 522 aa5.91□□□□□ -1.46
PHO88YBR106W YNR021WP53723 404 aaKnown RBP5.9□□□□□ -1.46
PHO88YBR106W RLF2Q12495 606 aa5.9□□□□□ -1.46
PHO88YBR106W COQ8P27697 501 aa5.88□□□□□ -1.47
PHO88YBR106W YMR1P47147 688 aaKnown RBP RIP-Chip data5.88□□□□□ -1.47not detected
PHO88YBR106W MAK21Q12176 1025 aaKnown RBP5.88□□□□□ -1.47
PHO88YBR106W WSC3Q12215 556 aa5.88□□□□□ -1.47
PHO88YBR106W RCR1P38212 213 aa5.87□□□□□ -1.47
PHO88YBR106W REF2P42073 533 aaPredicted RBP5.87□□□□□ -1.47
PHO88YBR106W AIM7Q12156 149 aa5.86□□□□□ -1.47
PHO88YBR106W MAM3Q12296 706 aa5.86□□□□□ -1.47
PHO88YBR106W VPS29P38759 282 aa5.85□□□□□ -1.47
PHO88YBR106W KIN1P13185 1064 aa5.82□□□□□ -1.48
PHO88YBR106W NSR1P27476 414 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48 RIP-Chip
PHO88YBR106W MIF2P35201 549 aa5.82□□□□□ -1.48
PHO88YBR106W TIF11P38912 153 aaKnown RBP5.81□□□□□ -1.48
PHO88YBR106W COX6P00427 148 aa5.79□□□□□ -1.48
PHO88YBR106W BMT6Q12291 365 aa5.79□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms