Protein–RNA interactions for Protein: P39552

MST28, Multicopy suppressor of SEC21 protein 28, yeastyeast

Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MST28P39552 NSR1YGR159C 1245 nt15.77■□□□□ 0.12
MST28P39552 YML009W-BYML009W-B 477 nt15.71■□□□□ 0.11
MST28P39552 NOP1YDL014W 984 nt15.27■□□□□ 0.04
MST28P39552 MDJ1YFL016C 1536 nt14.02□□□□□ -0.16
MST28P39552 YKL036CYKL036C 393 nt14.01□□□□□ -0.17
MST28P39552 Q0297Q0297 156 nt13.39□□□□□ -0.27
MST28P39552 SRX1YKL086W 384 nt13.38□□□□□ -0.27
MST28P39552 YJL027CYJL027C 417 nt13.03□□□□□ -0.32
MST28P39552 SCS3YGL126W 1143 nt12.71□□□□□ -0.37
MST28P39552 YCR051WYCR051W 669 nt12.6□□□□□ -0.39
MST28P39552 DBP2YNL112W 1641 nt12.44□□□□□ -0.42
MST28P39552 TRN1tP(UGG)A 72 nt12.16□□□□□ -0.46
MST28P39552 SUF9tP(UGG)F 72 nt12.16□□□□□ -0.46
MST28P39552 SUF8tP(UGG)H 72 nt12.16□□□□□ -0.46
MST28P39552 tP(UGG)LtP(UGG)L 72 nt12.16□□□□□ -0.46
MST28P39552 SUF7tP(UGG)M 72 nt12.16□□□□□ -0.46
MST28P39552 tP(UGG)N1tP(UGG)N1 72 nt12.16□□□□□ -0.46
MST28P39552 tP(UGG)N2tP(UGG)N2 72 nt12.16□□□□□ -0.46
MST28P39552 tP(UGG)O1tP(UGG)O1 72 nt12.16□□□□□ -0.46
MST28P39552 SUF11tP(UGG)O2 72 nt12.16□□□□□ -0.46
MST28P39552 YOL085CYOL085C 342 nt12.14□□□□□ -0.47
MST28P39552 YBR190WYBR190W 312 nt12.04□□□□□ -0.48
MST28P39552 RPP1BYDL130W 321 nt11.99□□□□□ -0.49
MST28P39552 SSA3YBL075C 1950 nt11.98□□□□□ -0.49
MST28P39552 CCC1YLR220W 969 nt11.92□□□□□ -0.5
MST28P39552 PKP1YIL042C 1185 nt11.9□□□□□ -0.5
MST28P39552 RTC3YHR087W 336 nt11.66□□□□□ -0.54
MST28P39552 RVS167YDR388W 1449 nt11.62□□□□□ -0.55
MST28P39552 SCJ1YMR214W 1134 nt11.57□□□□□ -0.56
MST28P39552 PET122YER153C 765 nt11.44□□□□□ -0.58
MST28P39552 tP(UGG)O3tP(UGG)O3 72 nt11.44□□□□□ -0.58
MST28P39552 ATS1YAL020C 1002 nt11.34□□□□□ -0.59
MST28P39552 SCR1SCR1 522 nt11.28□□□□□ -0.6
MST28P39552 SHR5YOL110W 714 nt11.23□□□□□ -0.61
MST28P39552 YDJ1YNL064C 1230 nt11.11□□□□□ -0.63
MST28P39552 RRN5YLR141W 1092 nt11.08□□□□□ -0.64
MST28P39552 PUT4YOR348C 1884 nt11.02□□□□□ -0.65
MST28P39552 URN1YPR152C 1398 nt10.94□□□□□ -0.66
MST28P39552 YER088W-BYER088W-B 147 nt10.88□□□□□ -0.67
MST28P39552 DEP1YAL013W 1218 nt10.85□□□□□ -0.67
MST28P39552 OPI9YLR338W 858 nt10.84□□□□□ -0.67
MST28P39552 RSB1YOR049C 1065 nt10.8□□□□□ -0.68
MST28P39552 GAR1YHR089C 618 nt10.79□□□□□ -0.68
MST28P39552 ARE1YCR048W 1833 nt10.78□□□□□ -0.68
MST28P39552 RPN10YHR200W 807 nt10.76□□□□□ -0.69
MST28P39552 SAH1YER043C 1350 nt10.75□□□□□ -0.69
MST28P39552 YNL208WYNL208W 600 nt10.74□□□□□ -0.69
MST28P39552 POA1YBR022W 534 nt10.6□□□□□ -0.71
MST28P39552 YHR049C-AYHR049C-A 297 nt10.59□□□□□ -0.71
MST28P39552 Q0182Q0182 405 nt10.55□□□□□ -0.72
MST28P39552 PST2YDR032C 597 nt10.54□□□□□ -0.72
MST28P39552 PUN1YLR414C 792 nt10.51□□□□□ -0.73
MST28P39552 SSA4YER103W 1929 nt10.5□□□□□ -0.73
MST28P39552 SPT5YML010W 3192 nt10.49□□□□□ -0.73
MST28P39552 TIR1YER011W 765 nt10.47□□□□□ -0.73
MST28P39552 BSC6YOL137W 1494 nt10.47□□□□□ -0.73
MST28P39552 YJR018WYJR018W 363 nt10.44□□□□□ -0.74
MST28P39552 SSA1YAL005C 1929 nt10.39□□□□□ -0.75
MST28P39552 PTC2YER089C 1395 nt10.36□□□□□ -0.75
MST28P39552 YJR120WYJR120W 351 nt10.31□□□□□ -0.76
MST28P39552 BUD23YCR047C 828 nt10.29□□□□□ -0.76
MST28P39552 NAB2YGL122C 1578 nt10.28□□□□□ -0.76
MST28P39552 RPP2BYDR382W 333 nt10.19□□□□□ -0.78
MST28P39552 SRB2YHR041C 633 nt10.18□□□□□ -0.78
MST28P39552 BDF1YLR399C 2061 nt10.16□□□□□ -0.78
MST28P39552 FIS1YIL065C 468 nt10.15□□□□□ -0.78
MST28P39552 DAL1YIR027C 1383 nt10.12□□□□□ -0.79
MST28P39552 SHU1YHL006C 453 nt10.11□□□□□ -0.79
MST28P39552 INM2YDR287W 879 nt10.1□□□□□ -0.79
MST28P39552 MOT3YMR070W 1473 nt10.07□□□□□ -0.8
MST28P39552 TAT1YBR069C 1860 nt10.05□□□□□ -0.8
MST28P39552 YKL097CYKL097C 411 nt10.03□□□□□ -0.8
MST28P39552 PHO4YFR034C 939 nt10.02□□□□□ -0.81
MST28P39552 YJL225CYJL225C 5277 nt10.01□□□□□ -0.81
MST28P39552 BDH2YAL061W 1254 nt10.01□□□□□ -0.81
MST28P39552 PAC11YDR488C 1602 nt10□□□□□ -0.81
MST28P39552 FPR4YLR449W 1179 nt10□□□□□ -0.81
MST28P39552 WWM1YFL010C 636 nt9.98□□□□□ -0.81
MST28P39552 YBL100CYBL100C 315 nt9.97□□□□□ -0.81
MST28P39552 YGR021WYGR021W 873 nt9.93□□□□□ -0.82
MST28P39552 YAL037C-BYAL037C-B 975 nt9.92□□□□□ -0.82
MST28P39552 HOM6YJR139C 1080 nt9.9□□□□□ -0.82
MST28P39552 MEP2YNL142W 1500 nt9.9□□□□□ -0.82
MST28P39552 YPS1YLR120C 1710 nt9.89□□□□□ -0.83
MST28P39552 LSM3YLR438C-A 270 nt9.88□□□□□ -0.83
MST28P39552 YFL021C-AYFL021C-A 855 nt9.86□□□□□ -0.83
MST28P39552 FUN26YAL022C 1554 nt9.85□□□□□ -0.83
MST28P39552 RDN37-1RDN37-1 5354 nt9.84□□□□□ -0.83
MST28P39552 RDN37-2RDN37-2 5354 nt9.84□□□□□ -0.83
MST28P39552 YDR095CYDR095C 411 nt9.82□□□□□ -0.84
MST28P39552 MNP1YGL068W 585 nt9.79□□□□□ -0.84
MST28P39552 TRM9YML014W 840 nt9.79□□□□□ -0.84
MST28P39552 CCT6YDR188W 1641 nt9.77□□□□□ -0.85
MST28P39552 RKM5YLR137W 1104 nt9.74□□□□□ -0.85
MST28P39552 NVJ2YPR091C 2313 nt9.72□□□□□ -0.85
MST28P39552 YHR165W-AYHR165W-A 312 nt9.71□□□□□ -0.86
MST28P39552 DCW1YKL046C 1350 nt9.69□□□□□ -0.86
MST28P39552 FPS1YLL043W 2010 nt9.68□□□□□ -0.86
MST28P39552 ALF1YNL148C 765 nt9.68□□□□□ -0.86
MST28P39552 YOR139CYOR139C 393 nt9.68□□□□□ -0.86
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms