Protein–RNA interactions for Protein: Q08673

SRL1, Cell wall protein SRL1, yeastyeast

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SRL1Q08673 YML009W-BYML009W-B 477 nt16.57■□□□□ 0.24
SRL1Q08673 NSR1YGR159C 1245 nt16.4■□□□□ 0.22
SRL1Q08673 NOP1YDL014W 984 nt16.28■□□□□ 0.2
SRL1Q08673 YKL036CYKL036C 393 nt15.13■□□□□ 0.01
SRL1Q08673 MDJ1YFL016C 1536 nt14.28□□□□□ -0.12
SRL1Q08673 Q0297Q0297 156 nt14.27□□□□□ -0.13
SRL1Q08673 SRX1YKL086W 384 nt14.18□□□□□ -0.14
SRL1Q08673 YJL027CYJL027C 417 nt14.14□□□□□ -0.15
SRL1Q08673 SCS3YGL126W 1143 nt13.8□□□□□ -0.2
SRL1Q08673 YCR051WYCR051W 669 nt13.43□□□□□ -0.26
SRL1Q08673 YOL085CYOL085C 342 nt13.07□□□□□ -0.32
SRL1Q08673 RPP1BYDL130W 321 nt12.79□□□□□ -0.36
SRL1Q08673 PKP1YIL042C 1185 nt12.78□□□□□ -0.36
SRL1Q08673 DBP2YNL112W 1641 nt12.72□□□□□ -0.37
SRL1Q08673 TRN1tP(UGG)A 72 nt12.7□□□□□ -0.38
SRL1Q08673 SUF9tP(UGG)F 72 nt12.7□□□□□ -0.38
SRL1Q08673 SUF8tP(UGG)H 72 nt12.7□□□□□ -0.38
SRL1Q08673 tP(UGG)LtP(UGG)L 72 nt12.7□□□□□ -0.38
SRL1Q08673 SUF7tP(UGG)M 72 nt12.7□□□□□ -0.38
SRL1Q08673 tP(UGG)N1tP(UGG)N1 72 nt12.7□□□□□ -0.38
SRL1Q08673 tP(UGG)N2tP(UGG)N2 72 nt12.7□□□□□ -0.38
SRL1Q08673 tP(UGG)O1tP(UGG)O1 72 nt12.7□□□□□ -0.38
SRL1Q08673 SUF11tP(UGG)O2 72 nt12.7□□□□□ -0.38
SRL1Q08673 SCJ1YMR214W 1134 nt12.56□□□□□ -0.4
SRL1Q08673 CCC1YLR220W 969 nt12.52□□□□□ -0.41
SRL1Q08673 ATS1YAL020C 1002 nt12.42□□□□□ -0.42
SRL1Q08673 YBR190WYBR190W 312 nt12.23□□□□□ -0.45
SRL1Q08673 SCR1SCR1 522 nt12.16□□□□□ -0.46
SRL1Q08673 PET122YER153C 765 nt12.15□□□□□ -0.46
SRL1Q08673 RVS167YDR388W 1449 nt12.11□□□□□ -0.47
SRL1Q08673 tP(UGG)O3tP(UGG)O3 72 nt12.07□□□□□ -0.48
SRL1Q08673 RTC3YHR087W 336 nt11.93□□□□□ -0.5
SRL1Q08673 RRN5YLR141W 1092 nt11.84□□□□□ -0.51
SRL1Q08673 YDJ1YNL064C 1230 nt11.72□□□□□ -0.53
SRL1Q08673 SHR5YOL110W 714 nt11.69□□□□□ -0.54
SRL1Q08673 RSB1YOR049C 1065 nt11.65□□□□□ -0.54
SRL1Q08673 YER088W-BYER088W-B 147 nt11.6□□□□□ -0.55
SRL1Q08673 PST2YDR032C 597 nt11.47□□□□□ -0.57
SRL1Q08673 GAR1YHR089C 618 nt11.36□□□□□ -0.59
SRL1Q08673 URN1YPR152C 1398 nt11.22□□□□□ -0.61
SRL1Q08673 DEP1YAL013W 1218 nt11.21□□□□□ -0.61
SRL1Q08673 RPN10YHR200W 807 nt11.19□□□□□ -0.62
SRL1Q08673 YNL208WYNL208W 600 nt11.15□□□□□ -0.62
SRL1Q08673 YKL097CYKL097C 411 nt11.12□□□□□ -0.63
SRL1Q08673 OPI9YLR338W 858 nt11.05□□□□□ -0.64
SRL1Q08673 TIR1YER011W 765 nt11□□□□□ -0.65
SRL1Q08673 SHU1YHL006C 453 nt10.93□□□□□ -0.66
SRL1Q08673 PUT4YOR348C 1884 nt10.91□□□□□ -0.66
SRL1Q08673 SAH1YER043C 1350 nt10.89□□□□□ -0.67
SRL1Q08673 SSA3YBL075C 1950 nt10.81□□□□□ -0.68
SRL1Q08673 SSA1YAL005C 1929 nt10.78□□□□□ -0.68
SRL1Q08673 PUN1YLR414C 792 nt10.77□□□□□ -0.69
SRL1Q08673 ARE1YCR048W 1833 nt10.76□□□□□ -0.69
SRL1Q08673 YJR018WYJR018W 363 nt10.73□□□□□ -0.69
SRL1Q08673 YAL037C-BYAL037C-B 975 nt10.65□□□□□ -0.7
SRL1Q08673 RPP2BYDR382W 333 nt10.62□□□□□ -0.71
SRL1Q08673 YHR049C-AYHR049C-A 297 nt10.62□□□□□ -0.71
SRL1Q08673 YGR021WYGR021W 873 nt10.59□□□□□ -0.71
SRL1Q08673 YOR139CYOR139C 393 nt10.59□□□□□ -0.71
SRL1Q08673 POA1YBR022W 534 nt10.58□□□□□ -0.72
SRL1Q08673 SRB2YHR041C 633 nt10.56□□□□□ -0.72
SRL1Q08673 PTC2YER089C 1395 nt10.54□□□□□ -0.72
SRL1Q08673 NPL3YDR432W 1245 nt10.53□□□□□ -0.72
SRL1Q08673 YJR120WYJR120W 351 nt10.53□□□□□ -0.72
SRL1Q08673 WWM1YFL010C 636 nt10.5□□□□□ -0.73
SRL1Q08673 HOM6YJR139C 1080 nt10.5□□□□□ -0.73
SRL1Q08673 YOL037CYOL037C 354 nt10.43□□□□□ -0.74
SRL1Q08673 NAB2YGL122C 1578 nt10.43□□□□□ -0.74
SRL1Q08673 YFL021C-AYFL021C-A 855 nt10.41□□□□□ -0.74
SRL1Q08673 MNP1YGL068W 585 nt10.41□□□□□ -0.74
SRL1Q08673 BDH2YAL061W 1254 nt10.4□□□□□ -0.74
SRL1Q08673 BUD23YCR047C 828 nt10.39□□□□□ -0.75
SRL1Q08673 INM2YDR287W 879 nt10.39□□□□□ -0.75
SRL1Q08673 RKM5YLR137W 1104 nt10.35□□□□□ -0.75
SRL1Q08673 LSM3YLR438C-A 270 nt10.34□□□□□ -0.75
SRL1Q08673 BSC6YOL137W 1494 nt10.32□□□□□ -0.76
SRL1Q08673 DAL1YIR027C 1383 nt10.31□□□□□ -0.76
SRL1Q08673 YBL100CYBL100C 315 nt10.26□□□□□ -0.77
SRL1Q08673 FPR4YLR449W 1179 nt10.25□□□□□ -0.77
SRL1Q08673 FIS1YIL065C 468 nt10.24□□□□□ -0.77
SRL1Q08673 PHO4YFR034C 939 nt10.19□□□□□ -0.78
SRL1Q08673 tM(CAU)CtM(CAU)C 72 nt10.19□□□□□ -0.78
SRL1Q08673 IMT4tM(CAU)E 72 nt10.19□□□□□ -0.78
SRL1Q08673 IMT3tM(CAU)J3 72 nt10.19□□□□□ -0.78
SRL1Q08673 IMT1tM(CAU)O1 72 nt10.19□□□□□ -0.78
SRL1Q08673 IMT2tM(CAU)P 72 nt10.19□□□□□ -0.78
SRL1Q08673 TRM9YML014W 840 nt10.19□□□□□ -0.78
SRL1Q08673 FUN26YAL022C 1554 nt10.14□□□□□ -0.79
SRL1Q08673 YLR281CYLR281C 468 nt10.13□□□□□ -0.79
SRL1Q08673 CCT6YDR188W 1641 nt10.07□□□□□ -0.8
SRL1Q08673 PUS2YGL063W 1113 nt10.06□□□□□ -0.8
SRL1Q08673 WHI5YOR083W 888 nt10.06□□□□□ -0.8
SRL1Q08673 SUF2tP(AGG)C 72 nt10.02□□□□□ -0.81
SRL1Q08673 SUF10tP(AGG)N 72 nt10.02□□□□□ -0.81
SRL1Q08673 ALF1YNL148C 765 nt9.99□□□□□ -0.81
SRL1Q08673 IMP2'YIL154C 1041 nt9.95□□□□□ -0.82
SRL1Q08673 YPS1YLR120C 1710 nt9.93□□□□□ -0.82
SRL1Q08673 YLR154C-GYLR154C-G 150 nt9.93□□□□□ -0.82
SRL1Q08673 YDR095CYDR095C 411 nt9.91□□□□□ -0.82
SRL1Q08673 DSK2YMR276W 1122 nt9.88□□□□□ -0.83
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms