RNA–Protein interactions for RNA: YER087C-B

SBH1, Transcript of Beta subunit of Sec61p ER translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SBH1, Length 249 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SBH1YER087C-B RPH1P39956 796 aa0.5□□□□□ -2.33
SBH1YER087C-B SHO1P40073 367 aa0.5□□□□□ -2.33
SBH1YER087C-B LSM5P40089 93 aaKnown RBP0.5□□□□□ -2.33
SBH1YER087C-B ALG8P40351 577 aa0.5□□□□□ -2.33
SBH1YER087C-B SPO22P40511 975 aa0.5□□□□□ -2.33
SBH1YER087C-B SGN1P40561 250 aaKnown RBP RIP-Chip data0.5□□□□□ -2.33not detected
SBH1YER087C-B YJL213WP40896 331 aa0.5□□□□□ -2.33
SBH1YER087C-B LYS14P40971 790 aa0.5□□□□□ -2.33
SBH1YER087C-B YPI1P43587 155 aa0.5□□□□□ -2.33
SBH1YER087C-B YFR016CP43597 1233 aaKnown RBP0.5□□□□□ -2.33
SBH1YER087C-B RRT5P43607 289 aa0.5□□□□□ -2.33
SBH1YER087C-B SCD6P45978 349 aaKnown RBP RIP-Chip data0.5□□□□□ -2.33not detected
SBH1YER087C-B DLD2P46681 530 aaKnown RBP0.5□□□□□ -2.33
SBH1YER087C-B TRS85P46944 698 aa0.5□□□□□ -2.33
SBH1YER087C-B GWT1P47026 490 aa0.5□□□□□ -2.33
SBH1YER087C-B IKS1P47042 667 aa0.5□□□□□ -2.33
SBH1YER087C-B AIM22P47051 409 aa0.5□□□□□ -2.33
SBH1YER087C-B PET130P47065 347 aa0.5□□□□□ -2.33
SBH1YER087C-B COS5P47187 383 aa0.5□□□□□ -2.33
SBH1YER087C-B SSN8P47821 323 aa0.5□□□□□ -2.33
SBH1YER087C-B RPS7BP48164 190 aaKnown RBP0.5□□□□□ -2.33
SBH1YER087C-B IMD4P50094 524 aaKnown RBP0.5□□□□□ -2.33
SBH1YER087C-B YGL108CP53139 140 aa0.5□□□□□ -2.33
SBH1YER087C-B RMD9P53140 646 aaKnown RBP0.5□□□□□ -2.33
SBH1YER087C-B ART5P53244 586 aaKnown RBP0.5□□□□□ -2.33
SBH1YER087C-B MSO1P53604 210 aaKnown RBP0.5□□□□□ -2.33
SBH1YER087C-B CAF40P53829 373 aa0.5□□□□□ -2.33
SBH1YER087C-B MRPL19P53875 158 aa0.5□□□□□ -2.33
SBH1YER087C-B IPI3P53877 555 aa0.5□□□□□ -2.33
SBH1YER087C-B IBD2P53892 351 aa0.5□□□□□ -2.33
SBH1YER087C-B NCS2P53923 493 aaPredicted RBP0.5□□□□□ -2.33
SBH1YER087C-B ARK1P53974 638 aa0.5□□□□□ -2.33
SBH1YER087C-B VPS9P54787 451 aa0.5□□□□□ -2.33
SBH1YER087C-B YPL014WQ02606 381 aa0.5□□□□□ -2.33
SBH1YER087C-B RLI1Q03195 608 aaKnown RBP0.5□□□□□ -2.33
SBH1YER087C-B NGL3Q03210 505 aa0.5□□□□□ -2.33
SBH1YER087C-B YMR181CQ03231 154 aa0.5□□□□□ -2.33
SBH1YER087C-B YML037CQ03703 340 aa0.5□□□□□ -2.33
SBH1YER087C-B YDR239CQ03780 787 aa0.5□□□□□ -2.33
SBH1YER087C-B TAF11Q04226 346 aa0.5□□□□□ -2.33
SBH1YER087C-B PDS5Q04264 1277 aa0.5□□□□□ -2.33
SBH1YER087C-B RBA50Q04418 439 aa0.5□□□□□ -2.33
SBH1YER087C-B HSP31Q04432 237 aa0.5□□□□□ -2.33
SBH1YER087C-B SOV1Q04748 898 aa0.5□□□□□ -2.33
SBH1YER087C-B IVY1Q04934 453 aa0.5□□□□□ -2.33
SBH1YER087C-B DON1Q05610 365 aa0.5□□□□□ -2.33
SBH1YER087C-B COQ9Q05779 260 aa0.5□□□□□ -2.33
SBH1YER087C-B YLR287CQ05881 355 aa0.5□□□□□ -2.33
SBH1YER087C-B COG4Q06096 861 aa0.5□□□□□ -2.33
SBH1YER087C-B PHO92Q06390 306 aa0.5□□□□□ -2.33
SBH1YER087C-B YDL057WQ07379 328 aa0.5□□□□□ -2.33
SBH1YER087C-B COS7Q07788 383 aa0.5□□□□□ -2.33
SBH1YER087C-B SKI7Q08491 747 aaPredicted RBP0.5□□□□□ -2.33
SBH1YER087C-B RIM20Q12033 661 aa0.5□□□□□ -2.33
SBH1YER087C-B ATG29Q12092 213 aa0.5□□□□□ -2.33
SBH1YER087C-B CFT2Q12102 859 aaPredicted RBP0.5□□□□□ -2.33
SBH1YER087C-B YLL056CQ12177 298 aa0.5□□□□□ -2.33
SBH1YER087C-B RLM1Q12224 676 aa0.5□□□□□ -2.33
SBH1YER087C-B RRD2Q12461 358 aa0.5□□□□□ -2.33
SBH1YER087C-B PGA3Q12746 312 aaKnown RBP0.5□□□□□ -2.33
SBH1YER087C-B CTF3Q12748 733 aa0.5□□□□□ -2.33
SBH1YER087C-B RRP12Q12754 1228 aaKnown RBP0.5□□□□□ -2.33
SBH1YER087C-B CAR1P00812 333 aaKnown RBP0.49□□□□□ -2.33
SBH1YER087C-B HIS4P00815 799 aaKnown RBP0.49□□□□□ -2.33
SBH1YER087C-B ARG4P04076 463 aaPredicted RBP0.49□□□□□ -2.33
SBH1YER087C-B HEM2P05373 342 aa0.49□□□□□ -2.33
SBH1YER087C-B MET17P06106 444 aa0.49□□□□□ -2.33
SBH1YER087C-B LEU4P06208 619 aaKnown RBP0.49□□□□□ -2.33
SBH1YER087C-B RPL20AP0CX23 172 aaKnown RBP0.49□□□□□ -2.33
SBH1YER087C-B RPL20BP0CX24 172 aaPredicted RBP0.49□□□□□ -2.33
SBH1YER087C-B PDX1P16451 410 aa0.49□□□□□ -2.33
SBH1YER087C-B HEM15P16622 393 aa0.49□□□□□ -2.33
SBH1YER087C-B CPR2P23285 205 aa0.49□□□□□ -2.33
SBH1YER087C-B CTR86P25355 563 aa0.49□□□□□ -2.33
SBH1YER087C-B PUT3P25502 979 aaPredicted RBP0.49□□□□□ -2.33
SBH1YER087C-B SPB1P25582 841 aaPredicted RBP0.49□□□□□ -2.33
SBH1YER087C-B YCR051WP25631 222 aa0.49□□□□□ -2.33
SBH1YER087C-B ADK2P26364 225 aa0.49□□□□□ -2.33
SBH1YER087C-B TIP1P27654 210 aaPredicted RBP0.49□□□□□ -2.33
SBH1YER087C-B KRE2P27809 442 aa0.49□□□□□ -2.33
SBH1YER087C-B ATS1P31386 333 aa0.49□□□□□ -2.33
SBH1YER087C-B SIN4P32259 974 aa0.49□□□□□ -2.33
SBH1YER087C-B AFG1P32317 509 aa0.49□□□□□ -2.33
SBH1YER087C-B HXT3P32466 567 aaKnown RBP0.49□□□□□ -2.33
SBH1YER087C-B ECM25P32525 599 aa0.49□□□□□ -2.33
SBH1YER087C-B FRE1P32791 686 aa0.49□□□□□ -2.33
SBH1YER087C-B REC114P32841 428 aa0.49□□□□□ -2.33
SBH1YER087C-B YME2P32843 850 aa0.49□□□□□ -2.33
SBH1YER087C-B PTR2P32901 601 aa0.49□□□□□ -2.33
SBH1YER087C-B MRP4P32902 394 aa0.49□□□□□ -2.33
SBH1YER087C-B NIP100P33420 868 aa0.49□□□□□ -2.33
SBH1YER087C-B PAD1P33751 242 aaKnown RBP RIP-Chip data0.49□□□□□ -2.33not detected
SBH1YER087C-B HCS1P34243 683 aa0.49□□□□□ -2.33
SBH1YER087C-B STB6P36085 766 aa0.49□□□□□ -2.33
SBH1YER087C-B TUL1P36096 758 aa0.49□□□□□ -2.33
SBH1YER087C-B JNM1P36224 373 aa0.49□□□□□ -2.33
SBH1YER087C-B CBP4P37267 147 aa0.49□□□□□ -2.33
SBH1YER087C-B NTC20P38302 140 aaPredicted RBP0.49□□□□□ -2.33
SBH1YER087C-B VHC1P38329 1120 aa0.49□□□□□ -2.33
SBH1YER087C-B LYS1P38998 373 aaRIP-Chip data0.49□□□□□ -2.33not detected
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms