RNA–Protein interactions for RNA: YBL024W

NCL1, Transcript of S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase, yeast

Gene NCL1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCL1	YBL024W	SLM4	P38247	162 aa		2.22	□□□□□ -2.05
NCL1	YBL024W	RXT2	P38255	430 aa		2.22	□□□□□ -2.05
NCL1	YBL024W	SYG1	P40528	902 aa		2.22	□□□□□ -2.05
NCL1	YBL024W	FET5	P43561	622 aa		2.22	□□□□□ -2.05
NCL1	YBL024W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	2.22	□□□□□ -2.05	not detected
NCL1	YBL024W	COS5	P47187	383 aa		2.22	□□□□□ -2.05
NCL1	YBL024W	OCA1	P50946	238 aa	Predicted RBP	2.22	□□□□□ -2.05
NCL1	YBL024W	YGL138C	P53122	345 aa		2.22	□□□□□ -2.05
NCL1	YBL024W	ESBP6	P53918	673 aa		2.22	□□□□□ -2.05
NCL1	YBL024W	RRP45	Q05636	305 aa	Known RBP	2.22	□□□□□ -2.05
NCL1	YBL024W	MMR1	Q06324	491 aa		2.22	□□□□□ -2.05
NCL1	YBL024W	COS7	Q07788	383 aa		2.22	□□□□□ -2.05
NCL1	YBL024W	APL5	Q08951	932 aa	Known RBP	2.22	□□□□□ -2.05
NCL1	YBL024W	SPE3	Q12074	293 aa	Known RBP	2.22	□□□□□ -2.05
NCL1	YBL024W	CTF3	Q12748	733 aa		2.22	□□□□□ -2.05
NCL1	YBL024W	MES1	P00958	751 aa	Known RBP	2.22	□□□□□ -2.05
NCL1	YBL024W	RHO2	P06781	192 aa		2.22	□□□□□ -2.05
NCL1	YBL024W	ATP10	P18496	279 aa		2.22	□□□□□ -2.05
NCL1	YBL024W	TYR1	P20049	452 aa		2.22	□□□□□ -2.05
NCL1	YBL024W	AIM17	P23180	465 aa	Known RBP	2.22	□□□□□ -2.05
NCL1	YBL024W	YCP4	P25349	247 aa	Known RBP	2.22	□□□□□ -2.05
NCL1	YBL024W	MCM4	P30665	933 aa	Known RBP	2.22	□□□□□ -2.05
NCL1	YBL024W	ATP11	P32453	318 aa		2.22	□□□□□ -2.05
NCL1	YBL024W	VPH1	P32563	840 aa	Known RBP	2.22	□□□□□ -2.05
NCL1	YBL024W	PHD1	P36093	366 aa		2.22	□□□□□ -2.05
NCL1	YBL024W	PIM1	P36775	1133 aa		2.22	□□□□□ -2.05
NCL1	YBL024W	YPK3	P38070	525 aa		2.22	□□□□□ -2.05
NCL1	YBL024W	GND1	P38720	489 aa	Known RBP	2.22	□□□□□ -2.05
NCL1	YBL024W	GDI1	P39958	451 aa	Known RBP	2.22	□□□□□ -2.05
NCL1	YBL024W	SER3	P40054	469 aa		2.22	□□□□□ -2.05
NCL1	YBL024W	EFM4	P40516	257 aa		2.22	□□□□□ -2.05
NCL1	YBL024W	RTS2	P40962	232 aa		2.22	□□□□□ -2.05
NCL1	YBL024W	FMS1	P50264	508 aa		2.22	□□□□□ -2.05
NCL1	YBL024W	SKO1	Q02100	647 aa		2.22	□□□□□ -2.05
NCL1	YBL024W	ACL4	Q03771	387 aa		2.22	□□□□□ -2.05
NCL1	YBL024W	HEL2	Q05580	639 aa	Known RBP	2.22	□□□□□ -2.05
NCL1	YBL024W	HIP1	P06775	603 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	GEX1	P25596	615 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	YUR1	P26725	428 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	MGM1	P32266	881 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	SPC34	P36131	295 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	NTC20	P38302	140 aa	Predicted RBP	2.21	□□□□□ -2.06
NCL1	YBL024W	ERG7	P38604	731 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	YER130C	P39959	443 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	SEC28	P40509	296 aa	Known RBP	2.21	□□□□□ -2.06
NCL1	YBL024W	YGR111W	P53265	400 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	ECI1	Q05871	280 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	UAF30	Q08747	228 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	VPS54	Q12071	889 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	VAM3	Q12241	283 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	GPH1	P06738	902 aa	Known RBP	2.21	□□□□□ -2.06
NCL1	YBL024W	RIP1	P08067	215 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	URA4	P20051	364 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	FUN19	P28003	413 aa	Predicted RBP	2.21	□□□□□ -2.06
NCL1	YBL024W	HIR2	P32480	875 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	NIP100	P33420	868 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	ARA1	P38115	344 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	IAH1	P41734	238 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	POP1	P41812	875 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	YJL055W	P47044	245 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	URB2	P47108	1174 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	ECM27	P47144	725 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	ALT2	P52892	507 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	CUL3	P53202	744 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	YNL181W	P53878	407 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	SMA1	Q02651	245 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	HOT1	Q03213	719 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	SLD5	Q03406	294 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	YMR087W	Q04299	284 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	MDM30	Q05930	598 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	PHO92	Q06390	306 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	2.21	□□□□□ -2.06	not detected
NCL1	YBL024W	RPN5	Q12250	445 aa	Known RBP	2.21	□□□□□ -2.06
NCL1	YBL024W	RKM5	Q12367	367 aa		2.21	□□□□□ -2.06
NCL1	YBL024W	SEC63	P14906	663 aa		2.2	□□□□□ -2.06
NCL1	YBL024W	MGR1	P25573	417 aa		2.2	□□□□□ -2.06
NCL1	YBL024W	VHC1	P38329	1120 aa		2.2	□□□□□ -2.06
NCL1	YBL024W	YHR054C	P38780	354 aa		2.2	□□□□□ -2.06
NCL1	YBL024W	PCL6	P40038	420 aa		2.2	□□□□□ -2.06
NCL1	YBL024W	YIR016W	P40572	265 aa		2.2	□□□□□ -2.06
NCL1	YBL024W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	2.2	□□□□□ -2.06	not detected
NCL1	YBL024W	YGR016W	P53209	190 aa		2.2	□□□□□ -2.06
NCL1	YBL024W	RPT4	P53549	437 aa	Known RBP	2.2	□□□□□ -2.06
NCL1	YBL024W	PEX25	Q02969	394 aa		2.2	□□□□□ -2.06
NCL1	YBL024W	YMR130W	Q04223	302 aa		2.2	□□□□□ -2.06
NCL1	YBL024W	THI20	Q08224	551 aa		2.2	□□□□□ -2.06
NCL1	YBL024W	DCI1	Q08558	271 aa		2.2	□□□□□ -2.06
NCL1	YBL024W	BRR1	Q99177	341 aa	Predicted RBP	2.2	□□□□□ -2.06
NCL1	YBL024W	LPD1	P09624	499 aa	Known RBP	2.19	□□□□□ -2.06
NCL1	YBL024W	YFL068W	P0CX99	160 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	YLL066W-A	P0CY00	160 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	YLL067W-A	P0CY01	160 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	GLK1	P17709	500 aa	Known RBP	2.19	□□□□□ -2.06
NCL1	YBL024W	SPO7	P18410	259 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	CLN1	P20437	546 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	BRF1	P29056	596 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	BEM1	P29366	551 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	PRP21	P32524	280 aa	Predicted RBP	2.19	□□□□□ -2.06
NCL1	YBL024W	UTR4	P32626	227 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	LTV1	P34078	463 aa		2.19	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms