Protein–RNA interactions for Protein: P40038

PCL6, PHO85 cyclin-6, yeastyeast

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PCL6P40038 NSR1YGR159C 1245 nt18.16■□□□□ 0.5
PCL6P40038 YML009W-BYML009W-B 477 nt17.84■□□□□ 0.45
PCL6P40038 NOP1YDL014W 984 nt17.06■□□□□ 0.32
PCL6P40038 MDJ1YFL016C 1536 nt16.7■□□□□ 0.26
PCL6P40038 YJL027CYJL027C 417 nt15.33■□□□□ 0.04
PCL6P40038 YKL036CYKL036C 393 nt15.25■□□□□ 0.03
PCL6P40038 SRX1YKL086W 384 nt14.92□□□□□ -0.02
PCL6P40038 Q0297Q0297 156 nt14.76□□□□□ -0.05
PCL6P40038 DBP2YNL112W 1641 nt14.55□□□□□ -0.08
PCL6P40038 YBR190WYBR190W 312 nt14.34□□□□□ -0.11
PCL6P40038 YCR051WYCR051W 669 nt14.15□□□□□ -0.14
PCL6P40038 RTC3YHR087W 336 nt14.03□□□□□ -0.16
PCL6P40038 SSA3YBL075C 1950 nt13.96□□□□□ -0.18
PCL6P40038 TRN1tP(UGG)A 72 nt13.83□□□□□ -0.2
PCL6P40038 SUF9tP(UGG)F 72 nt13.83□□□□□ -0.2
PCL6P40038 SUF8tP(UGG)H 72 nt13.83□□□□□ -0.2
PCL6P40038 tP(UGG)LtP(UGG)L 72 nt13.83□□□□□ -0.2
PCL6P40038 SUF7tP(UGG)M 72 nt13.83□□□□□ -0.2
PCL6P40038 tP(UGG)N1tP(UGG)N1 72 nt13.83□□□□□ -0.2
PCL6P40038 tP(UGG)N2tP(UGG)N2 72 nt13.83□□□□□ -0.2
PCL6P40038 tP(UGG)O1tP(UGG)O1 72 nt13.83□□□□□ -0.2
PCL6P40038 SUF11tP(UGG)O2 72 nt13.83□□□□□ -0.2
PCL6P40038 CCC1YLR220W 969 nt13.73□□□□□ -0.21
PCL6P40038 SCS3YGL126W 1143 nt13.61□□□□□ -0.23
PCL6P40038 RVS167YDR388W 1449 nt13.51□□□□□ -0.25
PCL6P40038 PUT4YOR348C 1884 nt13.48□□□□□ -0.25
PCL6P40038 SCJ1YMR214W 1134 nt13.37□□□□□ -0.27
PCL6P40038 RPP1BYDL130W 321 nt13.25□□□□□ -0.29
PCL6P40038 YOL085CYOL085C 342 nt13.23□□□□□ -0.29
PCL6P40038 PKP1YIL042C 1185 nt13.15□□□□□ -0.3
PCL6P40038 ARE1YCR048W 1833 nt13.07□□□□□ -0.32
PCL6P40038 POA1YBR022W 534 nt13.03□□□□□ -0.32
PCL6P40038 SAH1YER043C 1350 nt12.93□□□□□ -0.34
PCL6P40038 URN1YPR152C 1398 nt12.93□□□□□ -0.34
PCL6P40038 tP(UGG)O3tP(UGG)O3 72 nt12.91□□□□□ -0.34
PCL6P40038 YHR049C-AYHR049C-A 297 nt12.91□□□□□ -0.34
PCL6P40038 SHR5YOL110W 714 nt12.91□□□□□ -0.34
PCL6P40038 BSC6YOL137W 1494 nt12.84□□□□□ -0.35
PCL6P40038 OPI9YLR338W 858 nt12.83□□□□□ -0.36
PCL6P40038 DEP1YAL013W 1218 nt12.8□□□□□ -0.36
PCL6P40038 PET122YER153C 765 nt12.76□□□□□ -0.37
PCL6P40038 SPT5YML010W 3192 nt12.65□□□□□ -0.38
PCL6P40038 BUD23YCR047C 828 nt12.58□□□□□ -0.4
PCL6P40038 RPN10YHR200W 807 nt12.56□□□□□ -0.4
PCL6P40038 YNL208WYNL208W 600 nt12.48□□□□□ -0.41
PCL6P40038 SSA4YER103W 1929 nt12.48□□□□□ -0.41
PCL6P40038 YDJ1YNL064C 1230 nt12.45□□□□□ -0.42
PCL6P40038 PUN1YLR414C 792 nt12.44□□□□□ -0.42
PCL6P40038 SCR1SCR1 522 nt12.43□□□□□ -0.42
PCL6P40038 PTC2YER089C 1395 nt12.42□□□□□ -0.42
PCL6P40038 RRN5YLR141W 1092 nt12.33□□□□□ -0.44
PCL6P40038 NAB2YGL122C 1578 nt12.32□□□□□ -0.44
PCL6P40038 GAR1YHR089C 618 nt12.32□□□□□ -0.44
PCL6P40038 YJR018WYJR018W 363 nt12.29□□□□□ -0.44
PCL6P40038 FIS1YIL065C 468 nt12.1□□□□□ -0.47
PCL6P40038 MEP2YNL142W 1500 nt12.1□□□□□ -0.47
PCL6P40038 YER088W-BYER088W-B 147 nt12.07□□□□□ -0.48
PCL6P40038 BDF1YLR399C 2061 nt12.06□□□□□ -0.48
PCL6P40038 DAL1YIR027C 1383 nt12.05□□□□□ -0.48
PCL6P40038 FPR4YLR449W 1179 nt12.04□□□□□ -0.48
PCL6P40038 ATS1YAL020C 1002 nt12□□□□□ -0.49
PCL6P40038 YJR120WYJR120W 351 nt11.99□□□□□ -0.49
PCL6P40038 PHO4YFR034C 939 nt11.94□□□□□ -0.5
PCL6P40038 DCW1YKL046C 1350 nt11.93□□□□□ -0.5
PCL6P40038 TIR1YER011W 765 nt11.92□□□□□ -0.5
PCL6P40038 YPS1YLR120C 1710 nt11.91□□□□□ -0.5
PCL6P40038 RSB1YOR049C 1065 nt11.91□□□□□ -0.5
PCL6P40038 SSA1YAL005C 1929 nt11.91□□□□□ -0.5
PCL6P40038 INM2YDR287W 879 nt11.89□□□□□ -0.51
PCL6P40038 RPP2BYDR382W 333 nt11.87□□□□□ -0.51
PCL6P40038 TAT1YBR069C 1860 nt11.87□□□□□ -0.51
PCL6P40038 YHR165W-AYHR165W-A 312 nt11.81□□□□□ -0.52
PCL6P40038 EMI2YDR516C 1503 nt11.74□□□□□ -0.53
PCL6P40038 YDR095CYDR095C 411 nt11.73□□□□□ -0.53
PCL6P40038 YBL100CYBL100C 315 nt11.72□□□□□ -0.53
PCL6P40038 YBR220CYBR220C 1683 nt11.7□□□□□ -0.54
PCL6P40038 YMR090WYMR090W 684 nt11.67□□□□□ -0.54
PCL6P40038 SRB2YHR041C 633 nt11.63□□□□□ -0.55
PCL6P40038 YDL221WYDL221W 552 nt11.59□□□□□ -0.55
PCL6P40038 CAC2YML102W 1407 nt11.58□□□□□ -0.56
PCL6P40038 SDH1YKL148C 1923 nt11.56□□□□□ -0.56
PCL6P40038 FUN26YAL022C 1554 nt11.56□□□□□ -0.56
PCL6P40038 PTP1YDL230W 1008 nt11.54□□□□□ -0.56
PCL6P40038 BDH2YAL061W 1254 nt11.54□□□□□ -0.56
PCL6P40038 RPP2AYOL039W 321 nt11.52□□□□□ -0.57
PCL6P40038 ALF1YNL148C 765 nt11.5□□□□□ -0.57
PCL6P40038 PAC11YDR488C 1602 nt11.48□□□□□ -0.57
PCL6P40038 TRM9YML014W 840 nt11.43□□□□□ -0.58
PCL6P40038 SCC4YER147C 1875 nt11.42□□□□□ -0.58
PCL6P40038 IRC15YPL017C 1500 nt11.39□□□□□ -0.59
PCL6P40038 PCH2YBR186W 1695 nt11.38□□□□□ -0.59
PCL6P40038 FPS1YLL043W 2010 nt11.38□□□□□ -0.59
PCL6P40038 GUT2YIL155C 1950 nt11.34□□□□□ -0.59
PCL6P40038 SIS1YNL007C 1059 nt11.34□□□□□ -0.59
PCL6P40038 CCT6YDR188W 1641 nt11.33□□□□□ -0.6
PCL6P40038 GIS3YLR094C 1509 nt11.33□□□□□ -0.6
PCL6P40038 WWM1YFL010C 636 nt11.32□□□□□ -0.6
PCL6P40038 SEC11YIR022W 504 nt11.32□□□□□ -0.6
PCL6P40038 LSM3YLR438C-A 270 nt11.27□□□□□ -0.61
PCL6P40038 SUF2tP(AGG)C 72 nt11.26□□□□□ -0.61
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms