RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR78, Length 87 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR78snR78 TY1A-DR5P0CX65 440 aa11.28□□□□□ -0.6
snR78snR78 TY1A-ER2P0CX66 440 aa11.28□□□□□ -0.6
snR78snR78 TY1A-GR3P0CX67 440 aa11.28□□□□□ -0.6
snR78snR78 TY1A-LR1P0CX68 440 aa11.28□□□□□ -0.6
snR78snR78 TY1A-MR2P0CX69 440 aa11.28□□□□□ -0.6
snR78snR78 KEX2P13134 814 aa11.28□□□□□ -0.6
snR78snR78 SEC2P17065 759 aa11.28□□□□□ -0.6
snR78snR78 TY1A-JR2P47099 440 aa11.28□□□□□ -0.6
snR78snR78 TY1A-DR1Q03856 440 aa11.28□□□□□ -0.6
snR78snR78 TY1A-ML1Q04706 440 aaKnown RBP11.28□□□□□ -0.6
snR78snR78 TY1A-BRQ12217 440 aa11.28□□□□□ -0.6
snR78snR78 TY1A-NL2Q12470 440 aa11.28□□□□□ -0.6
snR78snR78 TY1A-GR2Q12485 440 aa11.28□□□□□ -0.6
snR78snR78 SDH2P21801 266 aa11.27□□□□□ -0.61
snR78snR78 RAS1P01119 309 aa11.26□□□□□ -0.61
snR78snR78 AMS1P22855 1083 aa11.25□□□□□ -0.61
snR78snR78 SPT16P32558 1035 aaKnown RBP11.25□□□□□ -0.61
snR78snR78 ERF2Q06551 359 aa11.25□□□□□ -0.61
snR78snR78 ERG12P07277 443 aa11.23□□□□□ -0.61
snR78snR78 ATF2P53296 535 aa11.23□□□□□ -0.61
snR78snR78 YNR021WP53723 404 aaKnown RBP11.23□□□□□ -0.61
snR78snR78 YEL077CQ3E7X8 1277 aa11.23□□□□□ -0.61
snR78snR78 PAT1P25644 796 aaKnown RBP11.21□□□□□ -0.61
snR78snR78 RRN7P40992 514 aa11.21□□□□□ -0.61
snR78snR78 NIS1P53939 407 aa11.2□□□□□ -0.62
snR78snR78 GLC3P32775 704 aa11.18□□□□□ -0.62
snR78snR78 RTF1P53064 558 aa11.17□□□□□ -0.62
snR78snR78 YNL115CP53925 644 aa11.17□□□□□ -0.62
snR78snR78 SIT4P20604 311 aa11.16□□□□□ -0.62
snR78snR78 YMR196WQ04336 1088 aa11.15□□□□□ -0.62
snR78snR78 FPK1P53739 893 aa11.12□□□□□ -0.63
snR78snR78 TUB4P53378 473 aa11.09□□□□□ -0.63
snR78snR78 SRC1Q03707 834 aa11.08□□□□□ -0.64
snR78snR78 CST6P40535 587 aa11.07□□□□□ -0.64
snR78snR78 LEU3P08638 886 aa11.06□□□□□ -0.64
snR78snR78 SLY41P22215 453 aa11.06□□□□□ -0.64
snR78snR78 AGE1Q04412 482 aa11.06□□□□□ -0.64
snR78snR78 AIM7Q12156 149 aa11.06□□□□□ -0.64
snR78snR78 PAC1P39946 494 aaKnown RBP11.05□□□□□ -0.64
snR78snR78 FRK1Q03002 865 aaPredicted RBP11.04□□□□□ -0.64
snR78snR78 HST2P53686 357 aa11.02□□□□□ -0.65
snR78snR78 LAM6Q08001 693 aa11.02□□□□□ -0.65
snR78snR78 SCJ1P25303 377 aa11.01□□□□□ -0.65
snR78snR78 BDP1P46678 594 aa11.01□□□□□ -0.65
snR78snR78 MMP1Q12372 583 aa11□□□□□ -0.65
snR78snR78 TRK1P12685 1235 aa10.98□□□□□ -0.65
snR78snR78 GLN1P32288 370 aaKnown RBP10.98□□□□□ -0.65
snR78snR78 PUS6P53294 404 aa10.95□□□□□ -0.66
snR78snR78 MOD5P07884 428 aa10.94□□□□□ -0.66
snR78snR78 KXD1P53158 218 aa10.94□□□□□ -0.66
snR78snR78 TYW1Q08960 810 aaKnown RBP10.94□□□□□ -0.66
snR78snR78 TBF1Q02457 562 aa10.93□□□□□ -0.66
snR78snR78 ESS1P22696 170 aa10.92□□□□□ -0.66
snR78snR78 RPN1P38764 993 aaKnown RBP10.91□□□□□ -0.66
snR78snR78 CLA4P48562 842 aa10.91□□□□□ -0.66
snR78snR78 AIR1P40507 360 aaKnown RBP10.9□□□□□ -0.66
snR78snR78 TRM1P15565 570 aaKnown RBP10.89□□□□□ -0.67
snR78snR78 CSN12P47130 423 aa10.89□□□□□ -0.67
snR78snR78 KIN1P13185 1064 aa10.88□□□□□ -0.67
snR78snR78 BUB1P41695 1021 aaKnown RBP RIP-Chip data10.88□□□□□ -0.67not detected
snR78snR78 HED1Q03937 162 aa10.87□□□□□ -0.67
snR78snR78 HXT10P43581 546 aa10.86□□□□□ -0.67
snR78snR78 PUS5Q06244 254 aa10.86□□□□□ -0.67
snR78snR78 YDL206WQ12424 762 aa10.86□□□□□ -0.67
snR78snR78 PDC1P06169 563 aaKnown RBP10.85□□□□□ -0.67
snR78snR78 KTR1P27810 393 aaKnown RBP10.85□□□□□ -0.67
snR78snR78 YJU3P28321 313 aa10.85□□□□□ -0.67
snR78snR78 RPA14P50106 137 aa10.85□□□□□ -0.67
snR78snR78 ALR1Q08269 859 aa10.84□□□□□ -0.67
snR78snR78 CDC4P07834 779 aa10.83□□□□□ -0.68
snR78snR78 PKH3Q03306 898 aaPredicted RBP10.83□□□□□ -0.68
snR78snR78 TPD3P31383 635 aa10.82□□□□□ -0.68
snR78snR78 RRD1P40454 393 aaKnown RBP10.81□□□□□ -0.68
snR78snR78 YPR097WQ06839 1073 aa10.81□□□□□ -0.68
snR78snR78 ARG8P18544 423 aa10.77□□□□□ -0.69
snR78snR78 RSC30P38781 883 aa10.75□□□□□ -0.69
snR78snR78 SSA2P10592 639 aaKnown RBP10.74□□□□□ -0.69
snR78snR78 SYH1Q02875 849 aaKnown RBP10.74□□□□□ -0.69
snR78snR78 GCR2Q01722 534 aa10.73□□□□□ -0.69
snR78snR78 BRE2P43132 505 aa10.72□□□□□ -0.69
snR78snR78 KIP2P28743 706 aa10.71□□□□□ -0.69
snR78snR78 MET32Q12041 191 aa10.71□□□□□ -0.69
snR78snR78 RAD59Q12223 238 aa10.7□□□□□ -0.7
snR78snR78 ASH1P34233 588 aa10.68□□□□□ -0.7
snR78snR78 GUA1P38625 525 aaKnown RBP10.68□□□□□ -0.7
snR78snR78 HST3P53687 447 aa10.68□□□□□ -0.7
snR78snR78 IXR1P33417 597 aa10.67□□□□□ -0.7
snR78snR78 AFT1P22149 690 aa10.64□□□□□ -0.71
snR78snR78 VAC17P25591 423 aa10.6□□□□□ -0.71
snR78snR78 HPC2Q01448 625 aa10.55□□□□□ -0.72
snR78snR78 UGA3P26370 528 aa10.53□□□□□ -0.72
snR78snR78 MRT4P33201 236 aaKnown RBP10.52□□□□□ -0.73
snR78snR78 YJR115WP47152 169 aa10.52□□□□□ -0.73
snR78snR78 MSB3P48566 633 aaPredicted RBP10.52□□□□□ -0.73
snR78snR78 BRL1P38770 471 aa10.51□□□□□ -0.73
snR78snR78 FIG4P42837 879 aa10.51□□□□□ -0.73
snR78snR78 MAK16P10962 306 aaPredicted RBP10.5□□□□□ -0.73
snR78snR78 ITT1Q04638 464 aa10.49□□□□□ -0.73
snR78snR78 TEC1P18412 486 aa10.48□□□□□ -0.73
snR78snR78 GAR1P28007 205 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 1138.4 ms