RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 TY1A-JR2P47099 440 aa6.32□□□□□ -1.4
snR54snR54 TY1A-DR1Q03856 440 aa6.32□□□□□ -1.4
snR54snR54 TY1A-ML1Q04706 440 aaKnown RBP6.32□□□□□ -1.4
snR54snR54 TY1A-BRQ12217 440 aa6.32□□□□□ -1.4
snR54snR54 TY1A-NL2Q12470 440 aa6.32□□□□□ -1.4
snR54snR54 TY1A-GR2Q12485 440 aa6.32□□□□□ -1.4
snR54snR54 PRT1P06103 763 aaKnown RBP6.31□□□□□ -1.4
snR54snR54 KEX2P13134 814 aa6.29□□□□□ -1.4
snR54snR54 SEC2P17065 759 aa6.29□□□□□ -1.4
snR54snR54 GCD11P32481 527 aaKnown RBP6.29□□□□□ -1.4
snR54snR54 SAS4Q04003 481 aa6.29□□□□□ -1.4
snR54snR54 ERF2Q06551 359 aa6.29□□□□□ -1.4
snR54snR54 RAS1P01119 309 aa6.27□□□□□ -1.41
snR54snR54 CLB5P30283 435 aa6.27□□□□□ -1.41
snR54snR54 TEA1P47988 759 aa6.26□□□□□ -1.41
snR54snR54 GLC3P32775 704 aa6.24□□□□□ -1.41
snR54snR54 NIS1P53939 407 aa6.24□□□□□ -1.41
snR54snR54 AMS1P22855 1083 aa6.23□□□□□ -1.41
snR54snR54 RRN7P40992 514 aa6.23□□□□□ -1.41
snR54snR54 YNR021WP53723 404 aaKnown RBP6.21□□□□□ -1.42
snR54snR54 SRC1Q03707 834 aa6.21□□□□□ -1.42
snR54snR54 MRF1P30775 413 aaPredicted RBP6.2□□□□□ -1.42
snR54snR54 SPT16P32558 1035 aaKnown RBP6.2□□□□□ -1.42
snR54snR54 SIT4P20604 311 aa6.19□□□□□ -1.42
snR54snR54 ATF2P53296 535 aa6.19□□□□□ -1.42
snR54snR54 YEL077CQ3E7X8 1277 aa6.19□□□□□ -1.42
snR54snR54 ERG12P07277 443 aa6.18□□□□□ -1.42
snR54snR54 CST6P40535 587 aa6.18□□□□□ -1.42
snR54snR54 FPK1P53739 893 aa6.18□□□□□ -1.42
snR54snR54 AGE1Q04412 482 aa6.18□□□□□ -1.42
snR54snR54 PAC1P39946 494 aaKnown RBP6.17□□□□□ -1.42
snR54snR54 RTF1P53064 558 aa6.17□□□□□ -1.42
snR54snR54 TUB4P53378 473 aa6.17□□□□□ -1.42
snR54snR54 YNL115CP53925 644 aa6.17□□□□□ -1.42
snR54snR54 YMR196WQ04336 1088 aa6.17□□□□□ -1.42
snR54snR54 SCJ1P25303 377 aa6.15□□□□□ -1.42
snR54snR54 PAT1P25644 796 aaKnown RBP6.14□□□□□ -1.43
snR54snR54 FRK1Q03002 865 aaPredicted RBP6.14□□□□□ -1.43
snR54snR54 LAM6Q08001 693 aa6.14□□□□□ -1.43
snR54snR54 LEU3P08638 886 aa6.13□□□□□ -1.43
snR54snR54 SLY41P22215 453 aa6.13□□□□□ -1.43
snR54snR54 BDP1P46678 594 aa6.13□□□□□ -1.43
snR54snR54 CLA4P48562 842 aa6.12□□□□□ -1.43
snR54snR54 AIM7Q12156 149 aa6.12□□□□□ -1.43
snR54snR54 AIR1P40507 360 aaKnown RBP6.1□□□□□ -1.43
snR54snR54 HST2P53686 357 aa6.1□□□□□ -1.43
snR54snR54 TYW1Q08960 810 aaKnown RBP6.1□□□□□ -1.43
snR54snR54 MMP1Q12372 583 aa6.09□□□□□ -1.43
snR54snR54 MOD5P07884 428 aa6.08□□□□□ -1.44
snR54snR54 ESS1P22696 170 aa6.08□□□□□ -1.44
snR54snR54 TRK1P12685 1235 aa6.07□□□□□ -1.44
snR54snR54 KTR1P27810 393 aaKnown RBP6.07□□□□□ -1.44
snR54snR54 GLN1P32288 370 aaKnown RBP6.07□□□□□ -1.44
snR54snR54 TRM1P15565 570 aaKnown RBP6.06□□□□□ -1.44
snR54snR54 YJU3P28321 313 aa6.06□□□□□ -1.44
snR54snR54 PUS5Q06244 254 aa6.06□□□□□ -1.44
snR54snR54 YDL206WQ12424 762 aa6.05□□□□□ -1.44
snR54snR54 PDC1P06169 563 aaKnown RBP6.04□□□□□ -1.44
snR54snR54 KIN1P13185 1064 aa6.04□□□□□ -1.44
snR54snR54 TBF1Q02457 562 aa6.04□□□□□ -1.44
snR54snR54 KXD1P53158 218 aa6.03□□□□□ -1.44
snR54snR54 PUS6P53294 404 aa6.03□□□□□ -1.44
snR54snR54 CSN12P47130 423 aa6.02□□□□□ -1.45
snR54snR54 PKH3Q03306 898 aaPredicted RBP6.02□□□□□ -1.45
snR54snR54 RPN1P38764 993 aaKnown RBP6.01□□□□□ -1.45
snR54snR54 RRD1P40454 393 aaKnown RBP6.01□□□□□ -1.45
snR54snR54 HXT10P43581 546 aa6.01□□□□□ -1.45
snR54snR54 RPA14P50106 137 aa6□□□□□ -1.45
snR54snR54 BUB1P41695 1021 aaKnown RBP RIP-Chip data5.99□□□□□ -1.45not detected
snR54snR54 HED1Q03937 162 aa5.99□□□□□ -1.45
snR54snR54 ALR1Q08269 859 aa5.99□□□□□ -1.45
snR54snR54 CDC4P07834 779 aa5.98□□□□□ -1.45
snR54snR54 TPD3P31383 635 aa5.98□□□□□ -1.45
snR54snR54 RSC30P38781 883 aa5.98□□□□□ -1.45
snR54snR54 YPR097WQ06839 1073 aa5.98□□□□□ -1.45
snR54snR54 ARG8P18544 423 aa5.97□□□□□ -1.45
snR54snR54 MET32Q12041 191 aa5.96□□□□□ -1.46
snR54snR54 GUA1P38625 525 aaKnown RBP5.95□□□□□ -1.46
snR54snR54 RAD59Q12223 238 aa5.95□□□□□ -1.46
snR54snR54 BRE2P43132 505 aa5.93□□□□□ -1.46
snR54snR54 SSA2P10592 639 aaKnown RBP5.92□□□□□ -1.46
snR54snR54 KIP2P28743 706 aa5.92□□□□□ -1.46
snR54snR54 SYH1Q02875 849 aaKnown RBP5.92□□□□□ -1.46
snR54snR54 ASH1P34233 588 aa5.9□□□□□ -1.46
snR54snR54 ITT1Q04638 464 aa5.9□□□□□ -1.46
snR54snR54 IXR1P33417 597 aa5.89□□□□□ -1.47
snR54snR54 AFT1P22149 690 aa5.88□□□□□ -1.47
snR54snR54 VAC17P25591 423 aa5.88□□□□□ -1.47
snR54snR54 HST3P53687 447 aa5.87□□□□□ -1.47
snR54snR54 GCR2Q01722 534 aa5.86□□□□□ -1.47
snR54snR54 FIG4P42837 879 aa5.85□□□□□ -1.47
snR54snR54 MAK16P10962 306 aaPredicted RBP5.83□□□□□ -1.48
snR54snR54 YJR115WP47152 169 aa5.83□□□□□ -1.48
snR54snR54 APP1P53933 587 aa5.83□□□□□ -1.48
snR54snR54 HPC2Q01448 625 aa5.83□□□□□ -1.48
snR54snR54 TFB3Q03290 321 aa5.83□□□□□ -1.48
snR54snR54 PKC1P24583 1151 aa5.82□□□□□ -1.48
snR54snR54 MRT4P33201 236 aaKnown RBP5.82□□□□□ -1.48
snR54snR54 MSB3P48566 633 aaPredicted RBP5.81□□□□□ -1.48
snR54snR54 TEC1P18412 486 aa5.8□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms