RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 MTC1P47018 478 aaKnown RBP11.86□□□□□ -0.51
snR54snR54 DRS1P32892 752 aaKnown RBP11.35□□□□□ -0.59
snR54snR54 FAP1P53971 965 aa10.42□□□□□ -0.74
snR54snR54 PRI1P10363 409 aa9.86□□□□□ -0.83
snR54snR54 DIP2Q12220 943 aaPredicted RBP9.84□□□□□ -0.83
snR54snR54 PRY3P47033 881 aa9.79□□□□□ -0.84
snR54snR54 AAD16Q02895 342 aa9.75□□□□□ -0.85
snR54snR54 ISW2Q08773 1120 aa9.75□□□□□ -0.85
snR54snR54 RPG1P38249 964 aaKnown RBP9.68□□□□□ -0.86
snR54snR54 AVT3P36062 692 aa9.56□□□□□ -0.88
snR54snR54 BFR2Q06631 534 aaKnown RBP9.55□□□□□ -0.88
snR54snR54 RSE1Q04693 1361 aaKnown RBP9.43□□□□□ -0.9
snR54snR54 TSR3Q12094 313 aaKnown RBP9.37□□□□□ -0.91
snR54snR54 YCK3P39962 524 aa9.27□□□□□ -0.93
snR54snR54 RPL17AP05740 184 aaKnown RBP9.15□□□□□ -0.94
snR54snR54 RPL17BP46990 184 aaKnown RBP9.15□□□□□ -0.94
snR54snR54 HAA1Q12753 694 aaKnown RBP9.14□□□□□ -0.95
snR54snR54 REB1P21538 810 aa9.07□□□□□ -0.96
snR54snR54 MRPL32P25348 183 aa8.95□□□□□ -0.98
snR54snR54 SPT21P35209 758 aa8.77□□□□□ -1.01
snR54snR54 YKR023WP36119 530 aaKnown RBP8.62□□□□□ -1.03
snR54snR54 CDC27P38042 758 aa8.6□□□□□ -1.03
snR54snR54 TFA1P36100 482 aa8.54□□□□□ -1.04
snR54snR54 YGL015CP33199 130 aa8.49□□□□□ -1.05
snR54snR54 RIM101P33400 625 aa8.48□□□□□ -1.05
snR54snR54 HOP09932 586 aa8.47□□□□□ -1.05
snR54snR54 DCD1P06773 312 aa8.45□□□□□ -1.06
snR54snR54 TFC8Q12308 588 aa8.44□□□□□ -1.06
snR54snR54 MAP2P38174 421 aaKnown RBP8.29□□□□□ -1.08
snR54snR54 UBP10P53874 792 aaPredicted RBP8.26□□□□□ -1.09
snR54snR54 OXP1P28273 1286 aa8.24□□□□□ -1.09
snR54snR54 BCH2P36122 765 aa8.17□□□□□ -1.1
snR54snR54 SCY1P53009 804 aa8.17□□□□□ -1.1
snR54snR54 PTP3P40048 928 aa8.11□□□□□ -1.11
snR54snR54 YIL055CP40523 627 aaKnown RBP8.09□□□□□ -1.11
snR54snR54 YAH1Q12184 172 aaKnown RBP8.06□□□□□ -1.12
snR54snR54 SLX5P32828 619 aaKnown RBP8.02□□□□□ -1.13
snR54snR54 EPS1P40557 701 aa7.99□□□□□ -1.13
snR54snR54 RSM7P47150 247 aa7.97□□□□□ -1.13
snR54snR54 BDF1P35817 686 aa7.95□□□□□ -1.14
snR54snR54 YLR271WQ06152 274 aa7.92□□□□□ -1.14
snR54snR54 TIF4632P39936 914 aaKnown RBP7.91□□□□□ -1.14
snR54snR54 AI2P03876 854 aa7.9□□□□□ -1.14
snR54snR54 TGL3P40308 642 aa7.86□□□□□ -1.15
snR54snR54 BBC1P47068 1157 aa7.86□□□□□ -1.15
snR54snR54 SSP1P38871 571 aa7.85□□□□□ -1.15
snR54snR54 PSD2P53037 1138 aaKnown RBP7.76□□□□□ -1.17
snR54snR54 ARP8Q12386 881 aaKnown RBP RIP-Chip data7.76□□□□□ -1.17not detected
snR54snR54 BUD31P25337 157 aaPredicted RBP7.69□□□□□ -1.18
snR54snR54 CST9Q06032 482 aa7.67□□□□□ -1.18
snR54snR54 MRM1P25270 412 aa7.64□□□□□ -1.19
snR54snR54 MGA2P40578 1113 aa7.62□□□□□ -1.19
snR54snR54 NSR1P27476 414 aaKnown RBP RIP-Chip data7.59□□□□□ -1.19not detected
snR54snR54 YOR238WQ08634 303 aa7.57□□□□□ -1.2
snR54snR54 MST1P07236 462 aa7.56□□□□□ -1.2
snR54snR54 YAP5P40574 245 aa7.56□□□□□ -1.2
snR54snR54 UBP9P39967 754 aa7.53□□□□□ -1.2
snR54snR54 PIB1Q06651 286 aa7.5□□□□□ -1.21
snR54snR54 RCR1P38212 213 aa7.48□□□□□ -1.21
snR54snR54 YBL029C-AQ3E756 94 aa7.47□□□□□ -1.21
snR54snR54 RTG3P38165 486 aa7.45□□□□□ -1.22
snR54snR54 VPS29P38759 282 aa7.44□□□□□ -1.22
snR54snR54 YFR006WP43590 535 aa7.4□□□□□ -1.22
snR54snR54 YMR1P47147 688 aaKnown RBP RIP-Chip data7.4□□□□□ -1.22not detected
snR54snR54 WSC3Q12215 556 aa7.4□□□□□ -1.22
snR54snR54 STS1P38637 319 aa7.39□□□□□ -1.23
snR54snR54 GTT3P39996 337 aa7.39□□□□□ -1.23
snR54snR54 DBP1P24784 617 aaKnown RBP7.38□□□□□ -1.23
snR54snR54 VNX1P42839 908 aa7.36□□□□□ -1.23
snR54snR54 SIS1P25294 352 aaKnown RBP7.35□□□□□ -1.23
snR54snR54 SPP1Q03012 353 aa7.3□□□□□ -1.24
snR54snR54 VMA1P17255 1071 aaKnown RBP7.28□□□□□ -1.24
snR54snR54 RAM2P29703 316 aa7.28□□□□□ -1.24
snR54snR54 TIF11P38912 153 aaKnown RBP7.25□□□□□ -1.25
snR54snR54 YOL036WQ08206 761 aa7.24□□□□□ -1.25
snR54snR54 SET4P42948 560 aa7.23□□□□□ -1.25
snR54snR54 MAK11P20484 414 aaKnown RBP7.2□□□□□ -1.26
snR54snR54 ULI1P43604 169 aa7.19□□□□□ -1.26
snR54snR54 SAM3Q08986 587 aa7.19□□□□□ -1.26
snR54snR54 MSB4Q12317 492 aa7.19□□□□□ -1.26
snR54snR54 LDB19Q12502 818 aa7.16□□□□□ -1.26
snR54snR54 MIF2P35201 549 aa7.15□□□□□ -1.26
snR54snR54 IOC2Q12072 812 aa7.15□□□□□ -1.26
snR54snR54 EDS1P38073 919 aa7.14□□□□□ -1.27
snR54snR54 TRP5P00931 707 aaKnown RBP7.13□□□□□ -1.27
snR54snR54 EAP1P36041 632 aaKnown RBP7.13□□□□□ -1.27
snR54snR54 FKH1P40466 484 aa7.12□□□□□ -1.27
snR54snR54 GYP5Q12344 894 aa7.12□□□□□ -1.27
snR54snR54 COQ8P27697 501 aa7.11□□□□□ -1.27
snR54snR54 AIR2Q12476 344 aaKnown RBP7.09□□□□□ -1.27
snR54snR54 PTC3P34221 468 aaKnown RBP7.08□□□□□ -1.28
snR54snR54 DCW1P36091 449 aa7.08□□□□□ -1.28
snR54snR54 GRE2Q12068 342 aaKnown RBP7.06□□□□□ -1.28
snR54snR54 RTG1P32607 177 aa7.05□□□□□ -1.28
snR54snR54 HTA1P04911 132 aaKnown RBP7.04□□□□□ -1.28
snR54snR54 HTA2P04912 132 aa7.04□□□□□ -1.28
snR54snR54 ABP1P15891 592 aaKnown RBP7.04□□□□□ -1.28
snR54snR54 ATH1P48016 1211 aa7.02□□□□□ -1.29
snR54snR54 YNL035CP53962 389 aaKnown RBP7.02□□□□□ -1.29
snR54snR54 YEL023CP39992 682 aa7□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms