RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 ASH1P34233 588 aa5.7□□□□□ -1.5
snR48snR48 TY1A-JR2P47099 440 aa5.7□□□□□ -1.5
snR48snR48 TY1A-DR1Q03856 440 aa5.7□□□□□ -1.5
snR48snR48 TY1A-ML1Q04706 440 aaKnown RBP5.7□□□□□ -1.5
snR48snR48 TY1A-BRQ12217 440 aa5.7□□□□□ -1.5
snR48snR48 TY1A-NL2Q12470 440 aa5.7□□□□□ -1.5
snR48snR48 TY1A-GR2Q12485 440 aa5.7□□□□□ -1.5
snR48snR48 TRK2P28584 889 aa5.69□□□□□ -1.5
snR48snR48 SEC2P17065 759 aa5.68□□□□□ -1.5
snR48snR48 GAP1P19145 602 aaPredicted RBP5.68□□□□□ -1.5
snR48snR48 RAD54P32863 898 aa5.68□□□□□ -1.5
snR48snR48 ACO2P39533 789 aa5.67□□□□□ -1.5
snR48snR48 MET32Q12041 191 aa5.67□□□□□ -1.5
snR48snR48 PEX21P50091 288 aa5.65□□□□□ -1.5
snR48snR48 TFB4Q12004 338 aa5.65□□□□□ -1.5
snR48snR48 NPL4P33755 580 aa5.64□□□□□ -1.51
snR48snR48 VHR2P40041 505 aa5.64□□□□□ -1.51
snR48snR48 GCD11P32481 527 aaKnown RBP5.63□□□□□ -1.51
snR48snR48 HST3P53687 447 aa5.62□□□□□ -1.51
snR48snR48 CAF120P53836 1060 aa5.62□□□□□ -1.51
snR48snR48 CSC1Q06538 782 aa5.62□□□□□ -1.51
snR48snR48 RRN7P40992 514 aa5.6□□□□□ -1.51
snR48snR48 TUM1Q08686 304 aaKnown RBP5.6□□□□□ -1.51
snR48snR48 YJR115WP47152 169 aa5.59□□□□□ -1.51
snR48snR48 YGR035CP53222 116 aa5.59□□□□□ -1.51
snR48snR48 PAT1P25644 796 aaKnown RBP5.58□□□□□ -1.52
snR48snR48 ICP55P40051 511 aa5.55□□□□□ -1.52
snR48snR48 LSB3P43603 459 aaKnown RBP5.55□□□□□ -1.52
snR48snR48 MOD5P07884 428 aa5.53□□□□□ -1.52
snR48snR48 YDR090CQ03193 310 aa5.53□□□□□ -1.52
snR48snR48 NRD1P53617 575 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
snR48snR48 HPF1Q05164 967 aa5.52□□□□□ -1.53
snR48snR48 PUS1Q12211 544 aaKnown RBP5.5□□□□□ -1.53
snR48snR48 MSB3P48566 633 aaPredicted RBP5.49□□□□□ -1.53
snR48snR48 OPT2Q06593 877 aa5.48□□□□□ -1.53
snR48snR48 YPR204WQ08995 1032 aa5.47□□□□□ -1.53
snR48snR48 GLY1P37303 387 aaKnown RBP5.45□□□□□ -1.54
snR48snR48 YIR007WP40566 764 aa5.45□□□□□ -1.54
snR48snR48 YLR346CQ06139 101 aa5.45□□□□□ -1.54
snR48snR48 KIC1P38692 1080 aa5.44□□□□□ -1.54
snR48snR48 ORC6P38826 435 aa5.44□□□□□ -1.54
snR48snR48 PUS5Q06244 254 aa5.42□□□□□ -1.54
snR48snR48 PHM7Q12252 991 aa5.42□□□□□ -1.54
snR48snR48 PAC1P39946 494 aaKnown RBP5.41□□□□□ -1.54
snR48snR48 PTK2P47116 818 aaKnown RBP5.39□□□□□ -1.55
snR48snR48 IFH1P39520 1085 aa5.38□□□□□ -1.55
snR48snR48 TY1A-BLQ12266 440 aa5.38□□□□□ -1.55
snR48snR48 MVP1P40959 511 aaKnown RBP5.37□□□□□ -1.55
snR48snR48 SET1P38827 1080 aaKnown RBP5.36□□□□□ -1.55
snR48snR48 SCW11P53189 542 aa5.36□□□□□ -1.55
snR48snR48 ERF2Q06551 359 aa5.35□□□□□ -1.55
snR48snR48 DPH6Q12429 685 aa5.35□□□□□ -1.55
snR48snR48 KEX2P13134 814 aa5.34□□□□□ -1.55
snR48snR48 NUP85P46673 744 aa5.34□□□□□ -1.55
snR48snR48 AGE1Q04412 482 aa5.34□□□□□ -1.55
snR48snR48 UGA3P26370 528 aa5.32□□□□□ -1.56
snR48snR48 YPR109WQ06104 294 aa5.32□□□□□ -1.56
snR48snR48 MIP1P15801 1254 aa5.31□□□□□ -1.56
snR48snR48 SRF1Q12516 437 aa5.31□□□□□ -1.56
snR48snR48 TPD3P31383 635 aa5.3□□□□□ -1.56
snR48snR48 CCT8P47079 568 aaKnown RBP5.29□□□□□ -1.56
snR48snR48 RGR1P19263 1082 aa5.28□□□□□ -1.56
snR48snR48 MDJ1P35191 511 aa5.28□□□□□ -1.56
snR48snR48 TUB4P53378 473 aa5.28□□□□□ -1.56
snR48snR48 TYW1Q08960 810 aaKnown RBP5.28□□□□□ -1.56
snR48snR48 SYH1Q02875 849 aaKnown RBP5.27□□□□□ -1.57
snR48snR48 RTT106P40161 455 aa5.25□□□□□ -1.57
snR48snR48 LYS5P50113 272 aa5.22□□□□□ -1.57
snR48snR48 REF2P42073 533 aaPredicted RBP5.21□□□□□ -1.58
snR48snR48 MRT4P33201 236 aaKnown RBP5.2□□□□□ -1.58
snR48snR48 ROG3P43602 733 aa5.2□□□□□ -1.58
snR48snR48 JJJ3P47138 172 aa5.2□□□□□ -1.58
snR48snR48 NSG2P53898 299 aa5.2□□□□□ -1.58
snR48snR48 UBP2Q01476 1272 aa5.2□□□□□ -1.58
snR48snR48 RTF1P53064 558 aa5.19□□□□□ -1.58
snR48snR48 TY1A-MR1Q04215 440 aa5.19□□□□□ -1.58
snR48snR48 CCP1P00431 361 aa5.18□□□□□ -1.58
snR48snR48 YFL066CP43538 392 aa5.18□□□□□ -1.58
snR48snR48 HXT10P43581 546 aa5.18□□□□□ -1.58
snR48snR48 KXD1P53158 218 aa5.18□□□□□ -1.58
snR48snR48 LSC2P53312 427 aa5.17□□□□□ -1.58
snR48snR48 MAK21Q12176 1025 aaKnown RBP5.15□□□□□ -1.59
snR48snR48 COX6P00427 148 aa5.14□□□□□ -1.59
snR48snR48 PDC1P06169 563 aaKnown RBP5.12□□□□□ -1.59
snR48snR48 SBP1P10080 294 aaKnown RBP5.12□□□□□ -1.59
snR48snR48 OSH7P38755 437 aa5.12□□□□□ -1.59
snR48snR48 YJR098CP47139 656 aa5.12□□□□□ -1.59
snR48snR48 AAD14P42884 376 aa5.11□□□□□ -1.59
snR48snR48 YNL115CP53925 644 aa5.11□□□□□ -1.59
snR48snR48 THI72Q08579 599 aa5.11□□□□□ -1.59
snR48snR48 AI1P03875 834 aa5.1□□□□□ -1.59
snR48snR48 ARG82P07250 355 aa5.1□□□□□ -1.59
snR48snR48 TCB1Q12466 1186 aa5.09□□□□□ -1.59
snR48snR48 YPR053CQ6Q5F3 151 aa5.08□□□□□ -1.6
snR48snR48 KIP2P28743 706 aa5.07□□□□□ -1.6
snR48snR48 CLB5P30283 435 aa5.06□□□□□ -1.6
snR48snR48 SKN7P38889 622 aa5.06□□□□□ -1.6
snR48snR48 YPR148CQ06523 435 aa5.06□□□□□ -1.6
snR48snR48 IXR1P33417 597 aa5.05□□□□□ -1.6
snR48snR48 SIT4P20604 311 aa5.03□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms