Protein–RNA interactions for Protein: P38889

SKN7, Transcription factor SKN7, yeastyeast

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SKN7P38889 NSR1YGR159C 1245 nt18.48■□□□□ 0.55
SKN7P38889 YML009W-BYML009W-B 477 nt18.45■□□□□ 0.54
SKN7P38889 NOP1YDL014W 984 nt17.89■□□□□ 0.45
SKN7P38889 MDJ1YFL016C 1536 nt16.51■□□□□ 0.23
SKN7P38889 YKL036CYKL036C 393 nt16.38■□□□□ 0.21
SKN7P38889 SRX1YKL086W 384 nt15.63■□□□□ 0.09
SKN7P38889 Q0297Q0297 156 nt15.62■□□□□ 0.09
SKN7P38889 YJL027CYJL027C 417 nt15.26■□□□□ 0.03
SKN7P38889 YCR051WYCR051W 669 nt14.82□□□□□ -0.04
SKN7P38889 SCS3YGL126W 1143 nt14.82□□□□□ -0.04
SKN7P38889 DBP2YNL112W 1641 nt14.57□□□□□ -0.08
SKN7P38889 TRN1tP(UGG)A 72 nt14.21□□□□□ -0.13
SKN7P38889 SUF9tP(UGG)F 72 nt14.21□□□□□ -0.13
SKN7P38889 SUF8tP(UGG)H 72 nt14.21□□□□□ -0.13
SKN7P38889 tP(UGG)LtP(UGG)L 72 nt14.21□□□□□ -0.13
SKN7P38889 SUF7tP(UGG)M 72 nt14.21□□□□□ -0.13
SKN7P38889 tP(UGG)N1tP(UGG)N1 72 nt14.21□□□□□ -0.13
SKN7P38889 tP(UGG)N2tP(UGG)N2 72 nt14.21□□□□□ -0.13
SKN7P38889 tP(UGG)O1tP(UGG)O1 72 nt14.21□□□□□ -0.13
SKN7P38889 SUF11tP(UGG)O2 72 nt14.21□□□□□ -0.13
SKN7P38889 YOL085CYOL085C 342 nt14.19□□□□□ -0.14
SKN7P38889 YBR190WYBR190W 312 nt14.13□□□□□ -0.15
SKN7P38889 CCC1YLR220W 969 nt14.08□□□□□ -0.16
SKN7P38889 RPP1BYDL130W 321 nt14.01□□□□□ -0.17
SKN7P38889 PKP1YIL042C 1185 nt13.99□□□□□ -0.17
SKN7P38889 RTC3YHR087W 336 nt13.81□□□□□ -0.2
SKN7P38889 RVS167YDR388W 1449 nt13.65□□□□□ -0.22
SKN7P38889 SCJ1YMR214W 1134 nt13.54□□□□□ -0.24
SKN7P38889 tP(UGG)O3tP(UGG)O3 72 nt13.41□□□□□ -0.26
SKN7P38889 PET122YER153C 765 nt13.4□□□□□ -0.26
SKN7P38889 ATS1YAL020C 1002 nt13.23□□□□□ -0.29
SKN7P38889 SCR1SCR1 522 nt13.22□□□□□ -0.29
SKN7P38889 SHR5YOL110W 714 nt13.15□□□□□ -0.3
SKN7P38889 RRN5YLR141W 1092 nt13.01□□□□□ -0.33
SKN7P38889 SSA3YBL075C 1950 nt13□□□□□ -0.33
SKN7P38889 YDJ1YNL064C 1230 nt12.96□□□□□ -0.33
SKN7P38889 PUT4YOR348C 1884 nt12.93□□□□□ -0.34
SKN7P38889 URN1YPR152C 1398 nt12.88□□□□□ -0.35
SKN7P38889 DEP1YAL013W 1218 nt12.83□□□□□ -0.36
SKN7P38889 YER088W-BYER088W-B 147 nt12.75□□□□□ -0.37
SKN7P38889 OPI9YLR338W 858 nt12.72□□□□□ -0.37
SKN7P38889 GAR1YHR089C 618 nt12.7□□□□□ -0.38
SKN7P38889 RSB1YOR049C 1065 nt12.69□□□□□ -0.38
SKN7P38889 SAH1YER043C 1350 nt12.69□□□□□ -0.38
SKN7P38889 ARE1YCR048W 1833 nt12.66□□□□□ -0.38
SKN7P38889 RPN10YHR200W 807 nt12.63□□□□□ -0.39
SKN7P38889 YNL208WYNL208W 600 nt12.61□□□□□ -0.39
SKN7P38889 POA1YBR022W 534 nt12.54□□□□□ -0.4
SKN7P38889 YHR049C-AYHR049C-A 297 nt12.48□□□□□ -0.41
SKN7P38889 PUN1YLR414C 792 nt12.34□□□□□ -0.43
SKN7P38889 PST2YDR032C 597 nt12.29□□□□□ -0.44
SKN7P38889 TIR1YER011W 765 nt12.28□□□□□ -0.44
SKN7P38889 YJR018WYJR018W 363 nt12.28□□□□□ -0.44
SKN7P38889 BSC6YOL137W 1494 nt12.27□□□□□ -0.45
SKN7P38889 PTC2YER089C 1395 nt12.22□□□□□ -0.45
SKN7P38889 BUD23YCR047C 828 nt12.2□□□□□ -0.46
SKN7P38889 SSA1YAL005C 1929 nt12.17□□□□□ -0.46
SKN7P38889 NAB2YGL122C 1578 nt12.09□□□□□ -0.47
SKN7P38889 YJR120WYJR120W 351 nt12.05□□□□□ -0.48
SKN7P38889 RPP2BYDR382W 333 nt11.99□□□□□ -0.49
SKN7P38889 YGR139WYGR139W 339 nt11.95□□□□□ -0.5
SKN7P38889 SRB2YHR041C 633 nt11.94□□□□□ -0.5
SKN7P38889 DAL1YIR027C 1383 nt11.89□□□□□ -0.51
SKN7P38889 INM2YDR287W 879 nt11.87□□□□□ -0.51
SKN7P38889 FIS1YIL065C 468 nt11.87□□□□□ -0.51
SKN7P38889 FPR4YLR449W 1179 nt11.86□□□□□ -0.51
SKN7P38889 YKL097CYKL097C 411 nt11.85□□□□□ -0.51
SKN7P38889 SHU1YHL006C 453 nt11.81□□□□□ -0.52
SKN7P38889 SPT5YML010W 3192 nt11.8□□□□□ -0.52
SKN7P38889 PHO4YFR034C 939 nt11.77□□□□□ -0.53
SKN7P38889 BDH2YAL061W 1254 nt11.73□□□□□ -0.53
SKN7P38889 WWM1YFL010C 636 nt11.72□□□□□ -0.53
SKN7P38889 YBL100CYBL100C 315 nt11.71□□□□□ -0.53
SKN7P38889 YAL037C-BYAL037C-B 975 nt11.69□□□□□ -0.54
SKN7P38889 YPS1YLR120C 1710 nt11.6□□□□□ -0.55
SKN7P38889 YGR021WYGR021W 873 nt11.59□□□□□ -0.55
SKN7P38889 FUN26YAL022C 1554 nt11.58□□□□□ -0.56
SKN7P38889 HOM6YJR139C 1080 nt11.56□□□□□ -0.56
SKN7P38889 LSM3YLR438C-A 270 nt11.56□□□□□ -0.56
SKN7P38889 TRM9YML014W 840 nt11.54□□□□□ -0.56
SKN7P38889 MEP2YNL142W 1500 nt11.53□□□□□ -0.56
SKN7P38889 YFL021C-AYFL021C-A 855 nt11.52□□□□□ -0.57
SKN7P38889 YDR095CYDR095C 411 nt11.5□□□□□ -0.57
SKN7P38889 YHR165W-AYHR165W-A 312 nt11.48□□□□□ -0.57
SKN7P38889 MNP1YGL068W 585 nt11.47□□□□□ -0.57
SKN7P38889 Q0182Q0182 405 nt11.47□□□□□ -0.57
SKN7P38889 ALF1YNL148C 765 nt11.43□□□□□ -0.58
SKN7P38889 CCT6YDR188W 1641 nt11.42□□□□□ -0.58
SKN7P38889 SSA4YER103W 1929 nt11.42□□□□□ -0.58
SKN7P38889 RKM5YLR137W 1104 nt11.39□□□□□ -0.59
SKN7P38889 DCW1YKL046C 1350 nt11.36□□□□□ -0.59
SKN7P38889 SUF2tP(AGG)C 72 nt11.33□□□□□ -0.6
SKN7P38889 SUF10tP(AGG)N 72 nt11.33□□□□□ -0.6
SKN7P38889 RPP2AYOL039W 321 nt11.3□□□□□ -0.6
SKN7P38889 SIS1YNL007C 1059 nt11.28□□□□□ -0.6
SKN7P38889 PTP1YDL230W 1008 nt11.27□□□□□ -0.61
SKN7P38889 YOR139CYOR139C 393 nt11.27□□□□□ -0.61
SKN7P38889 NPL3YDR432W 1245 nt11.25□□□□□ -0.61
SKN7P38889 YOL037CYOL037C 354 nt11.22□□□□□ -0.61
SKN7P38889 EMI2YDR516C 1503 nt11.21□□□□□ -0.61
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms