RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeastyeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDH1YPR002W YOL036WQ08206 761 aa7.46□□□□□ -1.21
PDH1YPR002W ARO1P08566 1588 aaKnown RBP7.46□□□□□ -1.22
PDH1YPR002W RTT106P40161 455 aa7.46□□□□□ -1.22
PDH1YPR002W SPP1Q03012 353 aa7.46□□□□□ -1.22
PDH1YPR002W PDR5P33302 1511 aaKnown RBP7.45□□□□□ -1.22
PDH1YPR002W GDB1Q06625 1536 aa7.45□□□□□ -1.22
PDH1YPR002W LEU3P08638 886 aa7.45□□□□□ -1.22
PDH1YPR002W SET4P42948 560 aa7.44□□□□□ -1.22
PDH1YPR002W SAM3Q08986 587 aa7.44□□□□□ -1.22
PDH1YPR002W SEC3P33332 1336 aaKnown RBP7.43□□□□□ -1.22
PDH1YPR002W SRB8P25648 1427 aa7.42□□□□□ -1.22
PDH1YPR002W PTC3P34221 468 aaKnown RBP7.42□□□□□ -1.22
PDH1YPR002W TIF11P38912 153 aaKnown RBP7.42□□□□□ -1.22
PDH1YPR002W SPT7P35177 1332 aa7.42□□□□□ -1.22
PDH1YPR002W SIS1P25294 352 aaKnown RBP7.42□□□□□ -1.22
PDH1YPR002W MSB4Q12317 492 aa7.41□□□□□ -1.22
PDH1YPR002W SPB4P25808 606 aaPredicted RBP7.39□□□□□ -1.23
PDH1YPR002W LEO1P38439 464 aa7.39□□□□□ -1.23
PDH1YPR002W PDR12Q02785 1511 aa7.39□□□□□ -1.23
PDH1YPR002W ULI1P43604 169 aa7.37□□□□□ -1.23
PDH1YPR002W SPO14P36126 1683 aa7.36□□□□□ -1.23
PDH1YPR002W GYP5Q12344 894 aa7.36□□□□□ -1.23
PDH1YPR002W GRE2Q12068 342 aaKnown RBP7.35□□□□□ -1.23
PDH1YPR002W IQG1Q12280 1495 aa7.35□□□□□ -1.23
PDH1YPR002W ATH1P48016 1211 aa7.34□□□□□ -1.23
PDH1YPR002W IOC2Q12072 812 aa7.34□□□□□ -1.23
PDH1YPR002W YRF1-1P0CX20 1796 aa7.34□□□□□ -1.23
PDH1YPR002W YRF1-5P0CX21 1796 aa7.34□□□□□ -1.23
PDH1YPR002W YRF1-8P0CX22 1796 aa7.34□□□□□ -1.23
PDH1YPR002W YLR419WQ06698 1435 aaKnown RBP7.34□□□□□ -1.23
PDH1YPR002W TRP5P00931 707 aaKnown RBP7.33□□□□□ -1.24
PDH1YPR002W EAP1P36041 632 aaKnown RBP7.33□□□□□ -1.24
PDH1YPR002W LDB19Q12502 818 aa7.33□□□□□ -1.24
PDH1YPR002W YOR093CQ12275 1648 aa7.32□□□□□ -1.24
PDH1YPR002W PBS2P08018 668 aa7.32□□□□□ -1.24
PDH1YPR002W GUT1P32190 709 aa7.32□□□□□ -1.24
PDH1YPR002W PRS1P32895 427 aaKnown RBP7.32□□□□□ -1.24
PDH1YPR002W REF2P42073 533 aaPredicted RBP7.32□□□□□ -1.24
PDH1YPR002W BUD3P25558 1636 aa7.32□□□□□ -1.24
PDH1YPR002W DCW1P36091 449 aa7.31□□□□□ -1.24
PDH1YPR002W DSF2P38213 736 aa7.3□□□□□ -1.24
PDH1YPR002W YSP2Q06681 1438 aa7.3□□□□□ -1.24
PDH1YPR002W MHP1P43638 1398 aa7.28□□□□□ -1.24
PDH1YPR002W MMS1Q06211 1407 aa7.28□□□□□ -1.24
PDH1YPR002W ABP1P15891 592 aaKnown RBP7.28□□□□□ -1.24
PDH1YPR002W FKH1P40466 484 aa7.28□□□□□ -1.24
PDH1YPR002W TY3B-IQ7LHG5 1498 aaKnown RBP7.28□□□□□ -1.24
PDH1YPR002W CHC1P22137 1653 aaKnown RBP7.27□□□□□ -1.25
PDH1YPR002W HTA1P04911 132 aaKnown RBP7.27□□□□□ -1.25
PDH1YPR002W HTA2P04912 132 aa7.27□□□□□ -1.25
PDH1YPR002W NUP157P40064 1391 aaKnown RBP7.25□□□□□ -1.25
PDH1YPR002W RPN1P38764 993 aaKnown RBP7.25□□□□□ -1.25
PDH1YPR002W MAK21Q12176 1025 aaKnown RBP7.25□□□□□ -1.25
PDH1YPR002W AIR2Q12476 344 aaKnown RBP7.25□□□□□ -1.25
PDH1YPR002W MAM3Q12296 706 aa7.24□□□□□ -1.25
PDH1YPR002W SEC7P11075 2009 aaKnown RBP7.23□□□□□ -1.25
PDH1YPR002W RTG1P32607 177 aa7.23□□□□□ -1.25
PDH1YPR002W YEL023CP39992 682 aa7.23□□□□□ -1.25
PDH1YPR002W NOP7P53261 605 aaKnown RBP7.23□□□□□ -1.25
PDH1YPR002W LTE1P07866 1435 aa7.23□□□□□ -1.25
PDH1YPR002W YGR273CP53329 174 aa7.22□□□□□ -1.25
PDH1YPR002W MET10P39692 1035 aa7.21□□□□□ -1.25
PDH1YPR002W VHR2P40041 505 aa7.21□□□□□ -1.25
PDH1YPR002W YNL035CP53962 389 aaKnown RBP7.21□□□□□ -1.25
PDH1YPR002W BUD21Q08492 214 aaPredicted RBP7.21□□□□□ -1.25
PDH1YPR002W COX6P00427 148 aa7.2□□□□□ -1.26
PDH1YPR002W SOL3P38858 249 aa7.2□□□□□ -1.26
PDH1YPR002W UBP14P38237 781 aaKnown RBP7.2□□□□□ -1.26
PDH1YPR002W DAN4P47179 1161 aa7.2□□□□□ -1.26
PDH1YPR002W NST1P53935 1240 aa7.2□□□□□ -1.26
PDH1YPR002W VMR1P38735 1592 aa7.18□□□□□ -1.26
PDH1YPR002W IES2P40154 320 aa7.18□□□□□ -1.26
PDH1YPR002W YLR326WQ06170 240 aaKnown RBP7.18□□□□□ -1.26
PDH1YPR002W DOP1Q03921 1698 aa7.18□□□□□ -1.26
PDH1YPR002W JIP4Q03361 876 aa7.17□□□□□ -1.26
PDH1YPR002W SEC61P32915 480 aa7.16□□□□□ -1.26
PDH1YPR002W PTC4P38089 393 aa7.16□□□□□ -1.26
PDH1YPR002W KIC1P38692 1080 aa7.16□□□□□ -1.26
PDH1YPR002W YDR090CQ03193 310 aa7.16□□□□□ -1.26
PDH1YPR002W PDR11P40550 1411 aa7.16□□□□□ -1.26
PDH1YPR002W RAV1P47104 1357 aa7.16□□□□□ -1.26
PDH1YPR002W NUP192P47054 1683 aa7.16□□□□□ -1.26
PDH1YPR002W YNR021WP53723 404 aaKnown RBP7.16□□□□□ -1.26
PDH1YPR002W KEX1P09620 729 aa7.15□□□□□ -1.27
PDH1YPR002W NCR1Q12200 1170 aa7.15□□□□□ -1.27
PDH1YPR002W RAD54P32863 898 aa7.14□□□□□ -1.27
PDH1YPR002W RTC1Q08281 1341 aa7.14□□□□□ -1.27
PDH1YPR002W MET5P47169 1442 aa7.13□□□□□ -1.27
PDH1YPR002W ILV3P39522 585 aaKnown RBP7.13□□□□□ -1.27
PDH1YPR002W PAF1P38351 445 aa7.12□□□□□ -1.27
PDH1YPR002W NUP42P49686 430 aaKnown RBP7.12□□□□□ -1.27
PDH1YPR002W NUP188P52593 1655 aaKnown RBP7.12□□□□□ -1.27
PDH1YPR002W BNR1P40450 1375 aa7.12□□□□□ -1.27
PDH1YPR002W CFT1Q06632 1357 aaKnown RBP7.12□□□□□ -1.27
PDH1YPR002W AI4P03878 556 aa7.12□□□□□ -1.27
PDH1YPR002W MPH3P0CE00 602 aa7.11□□□□□ -1.27
PDH1YPR002W PCS60P38137 543 aaKnown RBP RIP-Chip data7.11□□□□□ -1.27not detected
PDH1YPR002W YJL171CP46992 396 aa7.11□□□□□ -1.27
PDH1YPR002W DIT2P21595 489 aa7.1□□□□□ -1.27
PDH1YPR002W ORC1P54784 914 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms