RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeastyeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQS1YNL224C NPL4P33755 580 aa3.98□□□□□ -1.77
SQS1YNL224C YLR257WQ06146 321 aaKnown RBP3.98□□□□□ -1.77
SQS1YNL224C SPB4P25808 606 aaPredicted RBP3.97□□□□□ -1.77
SQS1YNL224C CDC11P32458 415 aa3.97□□□□□ -1.77
SQS1YNL224C POL5P39985 1022 aaKnown RBP3.97□□□□□ -1.77
SQS1YNL224C PTP3P40048 928 aa3.97□□□□□ -1.77
SQS1YNL224C NOP7P53261 605 aaKnown RBP3.97□□□□□ -1.77
SQS1YNL224C PSR1Q07800 427 aa3.97□□□□□ -1.77
SQS1YNL224C VPS5Q92331 675 aa3.97□□□□□ -1.77
SQS1YNL224C UBP1P25037 809 aa3.96□□□□□ -1.77
SQS1YNL224C SVL3Q03088 825 aaKnown RBP3.96□□□□□ -1.77
SQS1YNL224C MAM3Q12296 706 aa3.96□□□□□ -1.77
SQS1YNL224C BCK2P33306 851 aa3.96□□□□□ -1.78
SQS1YNL224C RSC8P43609 557 aaKnown RBP3.96□□□□□ -1.78
SQS1YNL224C HEL2Q05580 639 aaKnown RBP3.96□□□□□ -1.78
SQS1YNL224C MSH3P25336 1018 aa3.95□□□□□ -1.78
SQS1YNL224C ULI1P43604 169 aa3.95□□□□□ -1.78
SQS1YNL224C APL5Q08951 932 aaKnown RBP3.95□□□□□ -1.78
SQS1YNL224C BOI2P39969 1040 aa3.95□□□□□ -1.78
SQS1YNL224C GTT3P39996 337 aa3.95□□□□□ -1.78
SQS1YNL224C YAP5P40574 245 aa3.95□□□□□ -1.78
SQS1YNL224C JIP5Q06214 492 aaPredicted RBP3.95□□□□□ -1.78
SQS1YNL224C YDL121CQ07541 149 aa3.95□□□□□ -1.78
SQS1YNL224C YLL054CQ12244 843 aa3.95□□□□□ -1.78
SQS1YNL224C SNU66Q12420 587 aaPredicted RBP3.95□□□□□ -1.78
SQS1YNL224C HSC82P15108 705 aaKnown RBP3.94□□□□□ -1.78
SQS1YNL224C SAP190P36123 1033 aa3.94□□□□□ -1.78
SQS1YNL224C YNL058CP53947 316 aa3.94□□□□□ -1.78
SQS1YNL224C RPN7Q06103 429 aaKnown RBP3.94□□□□□ -1.78
SQS1YNL224C CMP2P14747 604 aa3.94□□□□□ -1.78
SQS1YNL224C VMA4P22203 233 aaKnown RBP3.94□□□□□ -1.78
SQS1YNL224C SEC27P41811 889 aaKnown RBP3.94□□□□□ -1.78
SQS1YNL224C PWP2P25635 923 aaKnown RBP3.93□□□□□ -1.78
SQS1YNL224C TOM20P35180 183 aa3.93□□□□□ -1.78
SQS1YNL224C ALD4P46367 519 aaKnown RBP3.93□□□□□ -1.78
SQS1YNL224C BNI4P53858 892 aa3.93□□□□□ -1.78
SQS1YNL224C SEC3P33332 1336 aaKnown RBP3.93□□□□□ -1.78
SQS1YNL224C DEP1P31385 405 aa3.93□□□□□ -1.78
SQS1YNL224C MET10P39692 1035 aa3.93□□□□□ -1.78
SQS1YNL224C IES2P40154 320 aa3.93□□□□□ -1.78
SQS1YNL224C CTF4Q01454 927 aa3.93□□□□□ -1.78
SQS1YNL224C IMH1Q06704 911 aaKnown RBP3.93□□□□□ -1.78
SQS1YNL224C SSF2Q12153 453 aaPredicted RBP3.93□□□□□ -1.78
SQS1YNL224C SIC1P38634 284 aa3.92□□□□□ -1.78
SQS1YNL224C SYH1Q02875 849 aaKnown RBP3.92□□□□□ -1.78
SQS1YNL224C MRF1P30775 413 aaPredicted RBP3.92□□□□□ -1.78
SQS1YNL224C RKM3P38222 552 aa3.92□□□□□ -1.78
SQS1YNL224C TPS3P38426 1054 aaKnown RBP3.92□□□□□ -1.78
SQS1YNL224C PPX1P38698 397 aa3.92□□□□□ -1.78
SQS1YNL224C ERP2P39704 215 aa3.92□□□□□ -1.78
SQS1YNL224C YAF9P53930 226 aa3.92□□□□□ -1.78
SQS1YNL224C IOC2Q12072 812 aa3.92□□□□□ -1.78
SQS1YNL224C OPI1P21957 404 aa3.91□□□□□ -1.78
SQS1YNL224C RIX1P38883 763 aaPredicted RBP3.91□□□□□ -1.78
SQS1YNL224C BFA1P47113 574 aa3.91□□□□□ -1.78
SQS1YNL224C NST1P53935 1240 aa3.91□□□□□ -1.78
SQS1YNL224C CHD1P32657 1468 aa3.91□□□□□ -1.78
SQS1YNL224C RRN6P32786 894 aa3.9□□□□□ -1.78
SQS1YNL224C MAL31P38156 614 aa3.9□□□□□ -1.78
SQS1YNL224C MGA2P40578 1113 aa3.9□□□□□ -1.78
SQS1YNL224C HOS2P53096 452 aaPredicted RBP3.9□□□□□ -1.78
SQS1YNL224C DNM1P54861 757 aa3.9□□□□□ -1.78
SQS1YNL224C TIM11P81449 96 aaPredicted RBP3.9□□□□□ -1.78
SQS1YNL224C YPR172WQ06608 200 aa3.9□□□□□ -1.78
SQS1YNL224C ESL2P36168 1195 aa3.9□□□□□ -1.79
SQS1YNL224C MEP1P40260 492 aa3.9□□□□□ -1.79
SQS1YNL224C TPM2P40414 161 aa3.9□□□□□ -1.79
SQS1YNL224C OCA1P50946 238 aaPredicted RBP3.9□□□□□ -1.79
SQS1YNL224C RSC2Q06488 889 aa3.9□□□□□ -1.79
SQS1YNL224C AVO1Q08236 1176 aa3.9□□□□□ -1.79
SQS1YNL224C ERP4Q12450 207 aa3.9□□□□□ -1.79
SQS1YNL224C RAD17P48581 401 aa3.89□□□□□ -1.79
SQS1YNL224C RPL5P26321 297 aaKnown RBP3.89□□□□□ -1.79
SQS1YNL224C MUM2P38236 366 aa3.89□□□□□ -1.79
SQS1YNL224C MSH4P40965 878 aaPredicted RBP3.89□□□□□ -1.79
SQS1YNL224C YOL057WQ08225 711 aa3.89□□□□□ -1.79
SQS1YNL224C DBP10Q12389 995 aaKnown RBP3.89□□□□□ -1.79
SQS1YNL224C PET111P08468 800 aa3.88□□□□□ -1.79
SQS1YNL224C LTV1P34078 463 aa3.88□□□□□ -1.79
SQS1YNL224C DSF2P38213 736 aa3.88□□□□□ -1.79
SQS1YNL224C OPY1P38271 328 aa3.88□□□□□ -1.79
SQS1YNL224C VPS27P40343 622 aaKnown RBP3.88□□□□□ -1.79
SQS1YNL224C REX2P54964 269 aaKnown RBP3.88□□□□□ -1.79
SQS1YNL224C VTC3Q02725 835 aa3.88□□□□□ -1.79
SQS1YNL224C SUB2Q07478 446 aaKnown RBP3.88□□□□□ -1.79
SQS1YNL224C NFI1Q12216 726 aa3.88□□□□□ -1.79
SQS1YNL224C HSP42Q12329 375 aa3.88□□□□□ -1.79
SQS1YNL224C SEC23P15303 768 aaKnown RBP3.88□□□□□ -1.79
SQS1YNL224C PHO87P25360 923 aa3.88□□□□□ -1.79
SQS1YNL224C SEC6P32844 805 aa3.88□□□□□ -1.79
SQS1YNL224C ALD2P47771 506 aa3.88□□□□□ -1.79
SQS1YNL224C VID30P53076 958 aa3.88□□□□□ -1.79
SQS1YNL224C PRP43P53131 767 aaKnown RBP3.88□□□□□ -1.79
SQS1YNL224C BNI5P53890 448 aaKnown RBP3.88□□□□□ -1.79
SQS1YNL224C ALD3P54114 506 aa3.88□□□□□ -1.79
SQS1YNL224C COG4Q06096 861 aa3.88□□□□□ -1.79
SQS1YNL224C SMD2Q06217 110 aaKnown RBP3.88□□□□□ -1.79
SQS1YNL224C RRP9Q06506 573 aaKnown RBP3.88□□□□□ -1.79
SQS1YNL224C CEX1Q12453 761 aa3.88□□□□□ -1.79
SQS1YNL224C MPH3P0CE00 602 aa3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms