RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeastyeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQS1YNL224C FAP1P53971 965 aa6.91□□□□□ -1.3
SQS1YNL224C PRY3P47033 881 aa6.53□□□□□ -1.36
SQS1YNL224C HAA1Q12753 694 aaKnown RBP6.11□□□□□ -1.43
SQS1YNL224C YCK3P39962 524 aa5.99□□□□□ -1.45
SQS1YNL224C MTC1P47018 478 aaKnown RBP5.96□□□□□ -1.46
SQS1YNL224C AAD16Q02895 342 aa5.95□□□□□ -1.46
SQS1YNL224C RQC2Q12532 1038 aaKnown RBP5.88□□□□□ -1.47
SQS1YNL224C PRI1P10363 409 aa5.76□□□□□ -1.49
SQS1YNL224C BUD31P25337 157 aaPredicted RBP5.52□□□□□ -1.53
SQS1YNL224C BFR2Q06631 534 aaKnown RBP5.47□□□□□ -1.53
SQS1YNL224C YGL015CP33199 130 aa5.4□□□□□ -1.54
SQS1YNL224C TAF7Q05021 590 aa5.38□□□□□ -1.55
SQS1YNL224C TSR3Q12094 313 aaKnown RBP5.36□□□□□ -1.55
SQS1YNL224C ISW2Q08773 1120 aa5.3□□□□□ -1.56
SQS1YNL224C MRPL32P25348 183 aa5.24□□□□□ -1.57
SQS1YNL224C TFA1P36100 482 aa5.24□□□□□ -1.57
SQS1YNL224C RPG1P38249 964 aaKnown RBP5.2□□□□□ -1.58
SQS1YNL224C SIS1P25294 352 aaKnown RBP5.18□□□□□ -1.58
SQS1YNL224C DRS1P32892 752 aaKnown RBP5.17□□□□□ -1.58
SQS1YNL224C URN1Q06525 465 aaKnown RBP5.15□□□□□ -1.59
SQS1YNL224C UBP9P39967 754 aa4.93□□□□□ -1.62
SQS1YNL224C SIS2P36024 562 aa4.83□□□□□ -1.64
SQS1YNL224C IOC4Q04213 475 aa4.81□□□□□ -1.64
SQS1YNL224C AVT3P36062 692 aa4.81□□□□□ -1.64
SQS1YNL224C YFR016CP43597 1233 aaKnown RBP4.8□□□□□ -1.64
SQS1YNL224C UBP10P53874 792 aaPredicted RBP4.78□□□□□ -1.64
SQS1YNL224C NAP1P25293 417 aaKnown RBP4.74□□□□□ -1.65
SQS1YNL224C EBP2P36049 427 aaKnown RBP4.73□□□□□ -1.65
SQS1YNL224C LEO1P38439 464 aa4.71□□□□□ -1.66
SQS1YNL224C KRI1P42846 591 aaKnown RBP4.68□□□□□ -1.66
SQS1YNL224C DIP2Q12220 943 aaPredicted RBP4.68□□□□□ -1.66
SQS1YNL224C CAB3P36076 571 aa4.67□□□□□ -1.66
SQS1YNL224C MAP2P38174 421 aaKnown RBP4.67□□□□□ -1.66
SQS1YNL224C DMA1P38823 416 aa4.67□□□□□ -1.66
SQS1YNL224C TIF4632P39936 914 aaKnown RBP4.64□□□□□ -1.67
SQS1YNL224C IFH1P39520 1085 aa4.63□□□□□ -1.67
SQS1YNL224C YRB30P53107 440 aaPredicted RBP4.63□□□□□ -1.67
SQS1YNL224C CDC27P38042 758 aa4.62□□□□□ -1.67
SQS1YNL224C TGL3P40308 642 aa4.59□□□□□ -1.67
SQS1YNL224C ORC1P54784 914 aaPredicted RBP4.59□□□□□ -1.67
SQS1YNL224C RPS0BP46654 252 aaKnown RBP4.57□□□□□ -1.68
SQS1YNL224C CWC22P53333 577 aaKnown RBP4.57□□□□□ -1.68
SQS1YNL224C REB1P21538 810 aa4.52□□□□□ -1.69
SQS1YNL224C ABP1P15891 592 aaKnown RBP4.51□□□□□ -1.69
SQS1YNL224C NOP2P40991 618 aaKnown RBP4.51□□□□□ -1.69
SQS1YNL224C SNU71P53207 620 aaKnown RBP4.51□□□□□ -1.69
SQS1YNL224C RSE1Q04693 1361 aaKnown RBP4.46□□□□□ -1.7
SQS1YNL224C RLP24Q07915 199 aaKnown RBP4.45□□□□□ -1.7
SQS1YNL224C PSH1Q12161 406 aa4.45□□□□□ -1.7
SQS1YNL224C TOP1P04786 769 aa4.45□□□□□ -1.7
SQS1YNL224C MDG1P53885 366 aa4.44□□□□□ -1.7
SQS1YNL224C AIM44Q99299 758 aa4.44□□□□□ -1.7
SQS1YNL224C SLX5P32828 619 aaKnown RBP4.42□□□□□ -1.7
SQS1YNL224C YJL171CP46992 396 aa4.4□□□□□ -1.71
SQS1YNL224C YPR148CQ06523 435 aa4.4□□□□□ -1.71
SQS1YNL224C SWE1P32944 819 aa4.38□□□□□ -1.71
SQS1YNL224C ATG36P46983 293 aa4.38□□□□□ -1.71
SQS1YNL224C RPL17AP05740 184 aaKnown RBP4.38□□□□□ -1.71
SQS1YNL224C RPL17BP46990 184 aaKnown RBP4.38□□□□□ -1.71
SQS1YNL224C ENV11P53246 860 aa4.38□□□□□ -1.71
SQS1YNL224C MNN4P36044 1178 aa4.37□□□□□ -1.71
SQS1YNL224C DEF1P35732 738 aaKnown RBP4.36□□□□□ -1.71
SQS1YNL224C SCY1P53009 804 aa4.35□□□□□ -1.71
SQS1YNL224C DMA2P53924 522 aa4.34□□□□□ -1.71
SQS1YNL224C YBL029C-AQ3E756 94 aa4.33□□□□□ -1.72
SQS1YNL224C GIN4Q12263 1142 aa4.32□□□□□ -1.72
SQS1YNL224C TPO2P53283 614 aa4.32□□□□□ -1.72
SQS1YNL224C LEU3P08638 886 aa4.3□□□□□ -1.72
SQS1YNL224C RGA2Q06407 1009 aa4.29□□□□□ -1.72
SQS1YNL224C TOA1P32773 286 aa4.29□□□□□ -1.72
SQS1YNL224C YKR023WP36119 530 aaKnown RBP4.29□□□□□ -1.72
SQS1YNL224C LAM6Q08001 693 aa4.29□□□□□ -1.72
SQS1YNL224C ISW1P38144 1129 aa4.28□□□□□ -1.72
SQS1YNL224C SUB1P54000 292 aaKnown RBP4.28□□□□□ -1.72
SQS1YNL224C SSA1P10591 642 aaKnown RBP4.27□□□□□ -1.73
SQS1YNL224C SSA2P10592 639 aaKnown RBP4.27□□□□□ -1.73
SQS1YNL224C HIF1Q12373 385 aa4.27□□□□□ -1.73
SQS1YNL224C AIR2Q12476 344 aaKnown RBP4.27□□□□□ -1.73
SQS1YNL224C RPN1P38764 993 aaKnown RBP4.27□□□□□ -1.73
SQS1YNL224C NUG1P40010 520 aaKnown RBP4.26□□□□□ -1.73
SQS1YNL224C JSN1P47135 1091 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73not detected
SQS1YNL224C BRL1P38770 471 aa4.24□□□□□ -1.73
SQS1YNL224C VNX1P42839 908 aa4.24□□□□□ -1.73
SQS1YNL224C SPP1Q03012 353 aa4.24□□□□□ -1.73
SQS1YNL224C NHA1Q99271 985 aa4.24□□□□□ -1.73
SQS1YNL224C TFC8Q12308 588 aa4.23□□□□□ -1.73
SQS1YNL224C SPT2P06843 333 aaPredicted RBP4.23□□□□□ -1.73
SQS1YNL224C FKH1P40466 484 aa4.23□□□□□ -1.73
SQS1YNL224C GRX3Q03835 250 aa4.23□□□□□ -1.73
SQS1YNL224C NSR1P27476 414 aaKnown RBP RIP-Chip data4.22□□□□□ -1.73not detected
SQS1YNL224C DAL5P15365 543 aa4.22□□□□□ -1.73
SQS1YNL224C RLF2Q12495 606 aa4.22□□□□□ -1.73
SQS1YNL224C MST1P07236 462 aa4.21□□□□□ -1.74
SQS1YNL224C HOP09932 586 aa4.21□□□□□ -1.74
SQS1YNL224C SPT7P35177 1332 aa4.21□□□□□ -1.74
SQS1YNL224C QCR6P00127 147 aa4.2□□□□□ -1.74
SQS1YNL224C BMT6Q12291 365 aa4.19□□□□□ -1.74
SQS1YNL224C DCD1P06773 312 aa4.18□□□□□ -1.74
SQS1YNL224C BRN1P38170 754 aa4.18□□□□□ -1.74
SQS1YNL224C VPS72Q03388 795 aa4.18□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms