RNA–Protein interactions for RNA: YNL172W

APC1, Transcript of Largest subunit of the Anaphase-Promoting Complex/Cyclosome, yeastyeast

Gene APC1, Length 5,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APC1YNL172W YAF9P53930 226 aa5.59□□□□□ -1.52
APC1YNL172W YER156CP40093 338 aaKnown RBP5.58□□□□□ -1.52
APC1YNL172W FPR3P38911 411 aaKnown RBP5.58□□□□□ -1.52
APC1YNL172W REB1P21538 810 aa5.58□□□□□ -1.52
APC1YNL172W BUD31P25337 157 aaPredicted RBP5.58□□□□□ -1.52
APC1YNL172W YBP2P53169 641 aa5.57□□□□□ -1.52
APC1YNL172W SPE2P21182 396 aa5.57□□□□□ -1.52
APC1YNL172W YBL086CP38177 466 aa5.56□□□□□ -1.52
APC1YNL172W CTT1P06115 562 aa5.56□□□□□ -1.52
APC1YNL172W TPM1P17536 199 aaKnown RBP5.56□□□□□ -1.52
APC1YNL172W SEC20P28791 383 aa5.56□□□□□ -1.52
APC1YNL172W PKH1Q03407 766 aa5.56□□□□□ -1.52
APC1YNL172W PSF3Q12146 194 aa5.56□□□□□ -1.52
APC1YNL172W VMR1P38735 1592 aa5.56□□□□□ -1.52
APC1YNL172W SSA1P10591 642 aaKnown RBP5.56□□□□□ -1.52
APC1YNL172W AOS1Q06624 347 aa5.56□□□□□ -1.52
APC1YNL172W HUL5P53119 910 aa5.55□□□□□ -1.52
APC1YNL172W RIX7Q07844 837 aaKnown RBP5.55□□□□□ -1.52
APC1YNL172W RTC1Q08281 1341 aa5.55□□□□□ -1.52
APC1YNL172W CLB5P30283 435 aa5.55□□□□□ -1.52
APC1YNL172W MSN5P52918 1224 aa5.55□□□□□ -1.52
APC1YNL172W IML1P47170 1584 aa5.55□□□□□ -1.52
APC1YNL172W FUN12P39730 1002 aaKnown RBP5.55□□□□□ -1.52
APC1YNL172W DPS1P04802 557 aaKnown RBP5.55□□□□□ -1.52
APC1YNL172W UTP22P53254 1237 aaPredicted RBP5.54□□□□□ -1.52
APC1YNL172W CRF1Q04930 467 aa5.54□□□□□ -1.52
APC1YNL172W RMT2Q03305 412 aa5.54□□□□□ -1.52
APC1YNL172W KRE5P22023 1365 aa5.54□□□□□ -1.52
APC1YNL172W YKL222CP35995 705 aa5.54□□□□□ -1.52
APC1YNL172W XKS1P42826 600 aa5.54□□□□□ -1.52
APC1YNL172W KIP3P53086 805 aaKnown RBP5.53□□□□□ -1.52
APC1YNL172W DNF3Q12674 1656 aa5.53□□□□□ -1.52
APC1YNL172W PTP3P40048 928 aa5.53□□□□□ -1.52
APC1YNL172W AAD16Q02895 342 aa5.53□□□□□ -1.52
APC1YNL172W BCK1Q01389 1478 aa5.53□□□□□ -1.52
APC1YNL172W RAV1P47104 1357 aa5.53□□□□□ -1.52
APC1YNL172W AVT3P36062 692 aa5.52□□□□□ -1.53
APC1YNL172W RRD1P40454 393 aaKnown RBP5.52□□□□□ -1.53
APC1YNL172W SSP2Q08646 371 aa5.52□□□□□ -1.53
APC1YNL172W SPT5P27692 1063 aaKnown RBP5.52□□□□□ -1.53
APC1YNL172W MSM1P22438 575 aa5.51□□□□□ -1.53
APC1YNL172W GAL2P13181 574 aa5.51□□□□□ -1.53
APC1YNL172W APP1P53933 587 aa5.51□□□□□ -1.53
APC1YNL172W RAT1Q02792 1006 aaKnown RBP5.51□□□□□ -1.53
APC1YNL172W RCM1P53972 490 aa5.5□□□□□ -1.53
APC1YNL172W TYS1P36421 394 aaKnown RBP5.5□□□□□ -1.53
APC1YNL172W SEC3P33332 1336 aaKnown RBP5.5□□□□□ -1.53
APC1YNL172W CHC1P22137 1653 aaKnown RBP5.5□□□□□ -1.53
APC1YNL172W RSF2P46974 1380 aa5.5□□□□□ -1.53
APC1YNL172W PSD2P53037 1138 aaKnown RBP5.5□□□□□ -1.53
APC1YNL172W MAK21Q12176 1025 aaKnown RBP5.49□□□□□ -1.53
APC1YNL172W SLI15P38283 698 aa5.49□□□□□ -1.53
APC1YNL172W ARO1P08566 1588 aaKnown RBP5.49□□□□□ -1.53
APC1YNL172W YRF1-4O13559 1382 aa5.49□□□□□ -1.53
APC1YNL172W PDR5P33302 1511 aaKnown RBP5.49□□□□□ -1.53
APC1YNL172W ARP8Q12386 881 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
APC1YNL172W BSD2P38356 321 aa5.49□□□□□ -1.53
APC1YNL172W RPN11P43588 306 aaKnown RBP5.49□□□□□ -1.53
APC1YNL172W NCB2Q92317 146 aa5.48□□□□□ -1.53
APC1YNL172W SAS4Q04003 481 aa5.48□□□□□ -1.53
APC1YNL172W ADE6P38972 1358 aaKnown RBP5.47□□□□□ -1.53
APC1YNL172W KCC4P25389 1037 aa5.47□□□□□ -1.53
APC1YNL172W UGA3P26370 528 aa5.47□□□□□ -1.53
APC1YNL172W YKR018CP36114 725 aa5.47□□□□□ -1.53
APC1YNL172W NST1P53935 1240 aa5.47□□□□□ -1.53
APC1YNL172W ORC1P54784 914 aaPredicted RBP5.47□□□□□ -1.53
APC1YNL172W RAD4P14736 754 aa5.46□□□□□ -1.53
APC1YNL172W YSP2Q06681 1438 aa5.46□□□□□ -1.53
APC1YNL172W SLM3Q12093 417 aa5.46□□□□□ -1.54
APC1YNL172W GLC3P32775 704 aa5.46□□□□□ -1.54
APC1YNL172W PES4P39684 611 aa5.46□□□□□ -1.54
APC1YNL172W SNU66Q12420 587 aaPredicted RBP5.45□□□□□ -1.54
APC1YNL172W CPS1P27614 576 aa5.45□□□□□ -1.54
APC1YNL172W MAM1P40065 302 aa5.45□□□□□ -1.54
APC1YNL172W NOP53Q12080 455 aaKnown RBP5.45□□□□□ -1.54
APC1YNL172W RPG1P38249 964 aaKnown RBP5.45□□□□□ -1.54
APC1YNL172W TOP1P04786 769 aa5.44□□□□□ -1.54
APC1YNL172W LPD1P09624 499 aaKnown RBP5.44□□□□□ -1.54
APC1YNL172W SQS1P53866 767 aaKnown RBP5.44□□□□□ -1.54
APC1YNL172W BUD27P43573 796 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
APC1YNL172W TIM50Q02776 476 aa5.43□□□□□ -1.54
APC1YNL172W TY1B-BRQ12193 1756 aa5.42□□□□□ -1.54
APC1YNL172W TY1B-GR3Q12316 1755 aa5.42□□□□□ -1.54
APC1YNL172W TY1B-ORQ92393 1755 aa5.42□□□□□ -1.54
APC1YNL172W FPK1P53739 893 aa5.42□□□□□ -1.54
APC1YNL172W TY2B-LR1P0C2J3 1770 aa5.42□□□□□ -1.54
APC1YNL172W TY2B-FP0CX63 1770 aa5.42□□□□□ -1.54
APC1YNL172W TY2B-GR2P0CX64 1770 aa5.42□□□□□ -1.54
APC1YNL172W TY2B-CP25384 1770 aa5.42□□□□□ -1.54
APC1YNL172W TY2B-DR2Q03494 1770 aa5.42□□□□□ -1.54
APC1YNL172W TY1B-DR1Q03855 1755 aa5.42□□□□□ -1.54
APC1YNL172W TY2B-DR3Q07791 1770 aaKnown RBP5.42□□□□□ -1.54
APC1YNL172W TY2B-OR1Q12113 1770 aa5.42□□□□□ -1.54
APC1YNL172W TY2B-DR1Q12472 1770 aa5.42□□□□□ -1.54
APC1YNL172W TY2B-OR2Q12501 1770 aa5.42□□□□□ -1.54
APC1YNL172W RPN1P38764 993 aaKnown RBP5.42□□□□□ -1.54
APC1YNL172W RPS24AP0CX31 135 aaKnown RBP5.42□□□□□ -1.54
APC1YNL172W RPS24BP0CX32 135 aaKnown RBP5.42□□□□□ -1.54
APC1YNL172W GAS4Q08271 471 aa5.42□□□□□ -1.54
APC1YNL172W RRP8P38961 392 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms